BLASTX nr result

ID: Bupleurum21_contig00028998 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00028998
         (424 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002309098.1| predicted protein [Populus trichocarpa] gi|2...   144   1e-32
ref|XP_003516286.1| PREDICTED: uncharacterized protein LOC100789...   140   1e-31
ref|XP_003520903.1| PREDICTED: uncharacterized protein LOC100791...   138   4e-31
emb|CBI30486.3| unnamed protein product [Vitis vinifera]              134   8e-30
ref|XP_002273930.1| PREDICTED: serine/threonine-protein kinase a...   134   8e-30

>ref|XP_002309098.1| predicted protein [Populus trichocarpa] gi|222855074|gb|EEE92621.1|
           predicted protein [Populus trichocarpa]
          Length = 724

 Score =  144 bits (362), Expect = 1e-32
 Identities = 72/100 (72%), Positives = 81/100 (81%)
 Frame = +1

Query: 1   GNMEMPDAMETIFQSALDLGRHGAVHEFSGNREIAAQFYSRALCLLYFLLVEGPSLIINP 180
           G+ EMPDAME IFQSAL LGRHG V E  GN E AA  YSRA CLL FLLVE PSLI+NP
Sbjct: 622 GSTEMPDAMEMIFQSALSLGRHGGVDELMGNMENAALLYSRAGCLLVFLLVEAPSLILNP 681

Query: 181 PFSLTDSDRYRLQTYINVLTNRQNHSRSPRMVLLDSEDQQ 300
           PFSLT+SDRYRL++YI++L NRQ+HSRS RM LL  EDQ+
Sbjct: 682 PFSLTNSDRYRLRSYIDILNNRQDHSRSQRMALLKCEDQR 721


>ref|XP_003516286.1| PREDICTED: uncharacterized protein LOC100789255 [Glycine max]
          Length = 720

 Score =  140 bits (352), Expect = 1e-31
 Identities = 72/106 (67%), Positives = 80/106 (75%)
 Frame = +1

Query: 1   GNMEMPDAMETIFQSALDLGRHGAVHEFSGNREIAAQFYSRALCLLYFLLVEGPSLIINP 180
           GN EMPDAMETIFQSAL  GRHG V E  G  E AA  YS+A+ LL FLLVEGPSLI+NP
Sbjct: 614 GNTEMPDAMETIFQSALAFGRHGGVKELMGEMESAAALYSKAVRLLVFLLVEGPSLILNP 673

Query: 181 PFSLTDSDRYRLQTYINVLTNRQNHSRSPRMVLLDSEDQQSPLNTK 318
           PFSLT+SDRYRL+ YI++L NRQ +SRS RM LL  ED Q  L  K
Sbjct: 674 PFSLTNSDRYRLRNYIDILNNRQGYSRSQRMTLLKCEDCQGILKEK 719


>ref|XP_003520903.1| PREDICTED: uncharacterized protein LOC100791596 [Glycine max]
          Length = 732

 Score =  138 bits (348), Expect = 4e-31
 Identities = 70/106 (66%), Positives = 80/106 (75%)
 Frame = +1

Query: 1   GNMEMPDAMETIFQSALDLGRHGAVHEFSGNREIAAQFYSRALCLLYFLLVEGPSLIINP 180
           GN EMPDAMETIFQSAL  GRHG V E  G  E AA  YS+A+ LL FLLVEGPSLI+NP
Sbjct: 626 GNTEMPDAMETIFQSALAFGRHGGVKELMGEMESAAALYSKAVRLLVFLLVEGPSLILNP 685

Query: 181 PFSLTDSDRYRLQTYINVLTNRQNHSRSPRMVLLDSEDQQSPLNTK 318
           PFSLT+SDRYRL+ YI++L NRQ +SRS RM LL  +D +  L  K
Sbjct: 686 PFSLTNSDRYRLRNYIDILNNRQGYSRSQRMTLLKCDDSRGILKEK 731


>emb|CBI30486.3| unnamed protein product [Vitis vinifera]
          Length = 716

 Score =  134 bits (337), Expect = 8e-30
 Identities = 70/102 (68%), Positives = 80/102 (78%)
 Frame = +1

Query: 1   GNMEMPDAMETIFQSALDLGRHGAVHEFSGNREIAAQFYSRALCLLYFLLVEGPSLIINP 180
           G+ EMPDAME IFQSAL LGR+GAV E  G+ E A   YS+A+ LL FLLVE PSLI+NP
Sbjct: 614 GSTEMPDAMEMIFQSALALGRNGAVDELMGDVESAVSLYSKAVHLLVFLLVEAPSLILNP 673

Query: 181 PFSLTDSDRYRLQTYINVLTNRQNHSRSPRMVLLDSEDQQSP 306
           PFSLT+SDRYRL+TYI++L  RQ HSRS RM LL  EDQQ P
Sbjct: 674 PFSLTNSDRYRLRTYIDILNIRQVHSRSQRMNLLKCEDQQCP 715


>ref|XP_002273930.1| PREDICTED: serine/threonine-protein kinase atg-1 [Vitis vinifera]
          Length = 732

 Score =  134 bits (337), Expect = 8e-30
 Identities = 70/102 (68%), Positives = 80/102 (78%)
 Frame = +1

Query: 1   GNMEMPDAMETIFQSALDLGRHGAVHEFSGNREIAAQFYSRALCLLYFLLVEGPSLIINP 180
           G+ EMPDAME IFQSAL LGR+GAV E  G+ E A   YS+A+ LL FLLVE PSLI+NP
Sbjct: 630 GSTEMPDAMEMIFQSALALGRNGAVDELMGDVESAVSLYSKAVHLLVFLLVEAPSLILNP 689

Query: 181 PFSLTDSDRYRLQTYINVLTNRQNHSRSPRMVLLDSEDQQSP 306
           PFSLT+SDRYRL+TYI++L  RQ HSRS RM LL  EDQQ P
Sbjct: 690 PFSLTNSDRYRLRTYIDILNIRQVHSRSQRMNLLKCEDQQCP 731


Top