BLASTX nr result

ID: Bupleurum21_contig00028981 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00028981
         (313 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002266168.2| PREDICTED: uncharacterized protein LOC100266...   175   4e-42
emb|CBI33596.3| unnamed protein product [Vitis vinifera]              175   4e-42
ref|XP_002528057.1| DNA ligase I, putative [Ricinus communis] gi...   168   5e-40
ref|XP_003624408.1| DNA ligase [Medicago truncatula] gi|35549942...   162   3e-38
ref|XP_003551833.1| PREDICTED: uncharacterized protein LOC100807...   159   2e-37

>ref|XP_002266168.2| PREDICTED: uncharacterized protein LOC100266816 [Vitis vinifera]
          Length = 1449

 Score =  175 bits (443), Expect = 4e-42
 Identities = 85/104 (81%), Positives = 93/104 (89%)
 Frame = +2

Query: 2    YDGQRAQIHKLSDGSVRVFSRNGDETTSGFPDLVNIIMESCSSEAETFVLDAEVVAVDRK 181
            YDGQRAQIHKL DGSVR+FSRNGDETTS FPDLV+++ ESC  +A TF+LDAEVVA+DRK
Sbjct: 1094 YDGQRAQIHKLVDGSVRIFSRNGDETTSRFPDLVSVVRESCKPDALTFILDAEVVAIDRK 1153

Query: 182  NGCKLMSFQELSSRERGGKDSSIAVDSIKVDICVFAFDIMFANG 313
            NG KLMSFQELSSRERG KDS I +DSIKVDICVF FDIMFANG
Sbjct: 1154 NGSKLMSFQELSSRERGSKDSLITLDSIKVDICVFVFDIMFANG 1197


>emb|CBI33596.3| unnamed protein product [Vitis vinifera]
          Length = 1390

 Score =  175 bits (443), Expect = 4e-42
 Identities = 85/104 (81%), Positives = 93/104 (89%)
 Frame = +2

Query: 2    YDGQRAQIHKLSDGSVRVFSRNGDETTSGFPDLVNIIMESCSSEAETFVLDAEVVAVDRK 181
            YDGQRAQIHKL DGSVR+FSRNGDETTS FPDLV+++ ESC  +A TF+LDAEVVA+DRK
Sbjct: 1035 YDGQRAQIHKLVDGSVRIFSRNGDETTSRFPDLVSVVRESCKPDALTFILDAEVVAIDRK 1094

Query: 182  NGCKLMSFQELSSRERGGKDSSIAVDSIKVDICVFAFDIMFANG 313
            NG KLMSFQELSSRERG KDS I +DSIKVDICVF FDIMFANG
Sbjct: 1095 NGSKLMSFQELSSRERGSKDSLITLDSIKVDICVFVFDIMFANG 1138


>ref|XP_002528057.1| DNA ligase I, putative [Ricinus communis] gi|223532518|gb|EEF34307.1|
            DNA ligase I, putative [Ricinus communis]
          Length = 1360

 Score =  168 bits (425), Expect = 5e-40
 Identities = 82/104 (78%), Positives = 91/104 (87%)
 Frame = +2

Query: 2    YDGQRAQIHKLSDGSVRVFSRNGDETTSGFPDLVNIIMESCSSEAETFVLDAEVVAVDRK 181
            YDGQRAQIHKL +GS+RVFSRNGDETTS FPDL+NII ESC   A TF++DAEVVAVDRK
Sbjct: 1004 YDGQRAQIHKLPNGSIRVFSRNGDETTSRFPDLINIIEESCKPTAVTFIVDAEVVAVDRK 1063

Query: 182  NGCKLMSFQELSSRERGGKDSSIAVDSIKVDICVFAFDIMFANG 313
            NG KLM+FQELSSRERG KDSSI ++ IKV ICVF FD+MFANG
Sbjct: 1064 NGHKLMAFQELSSRERGSKDSSITLNKIKVQICVFVFDVMFANG 1107


>ref|XP_003624408.1| DNA ligase [Medicago truncatula] gi|355499423|gb|AES80626.1| DNA
            ligase [Medicago truncatula]
          Length = 1498

 Score =  162 bits (410), Expect = 3e-38
 Identities = 77/104 (74%), Positives = 89/104 (85%)
 Frame = +2

Query: 2    YDGQRAQIHKLSDGSVRVFSRNGDETTSGFPDLVNIIMESCSSEAETFVLDAEVVAVDRK 181
            YDGQRAQIHKL DGSV VFSRNGDE+TS FPDLV++I ESC   A TF++DAEVV +DRK
Sbjct: 1070 YDGQRAQIHKLVDGSVLVFSRNGDESTSRFPDLVDMIKESCKPVASTFIIDAEVVGIDRK 1129

Query: 182  NGCKLMSFQELSSRERGGKDSSIAVDSIKVDICVFAFDIMFANG 313
            NGC++MSFQELSSR RGGKD+ +  +SIKV IC+F FDIMFANG
Sbjct: 1130 NGCRIMSFQELSSRGRGGKDTLVTKESIKVGICIFVFDIMFANG 1173


>ref|XP_003551833.1| PREDICTED: uncharacterized protein LOC100807673 [Glycine max]
          Length = 1402

 Score =  159 bits (403), Expect = 2e-37
 Identities = 75/104 (72%), Positives = 89/104 (85%)
 Frame = +2

Query: 2    YDGQRAQIHKLSDGSVRVFSRNGDETTSGFPDLVNIIMESCSSEAETFVLDAEVVAVDRK 181
            YDGQRAQIHKL DGS+RVFSRNGDE+TS FPDL++II ES    A TF++DAE+V +DRK
Sbjct: 1046 YDGQRAQIHKLVDGSIRVFSRNGDESTSRFPDLIDIIKESSKPVASTFIMDAEIVGIDRK 1105

Query: 182  NGCKLMSFQELSSRERGGKDSSIAVDSIKVDICVFAFDIMFANG 313
            NG ++MSFQELSSR RGGKD+ +  +SIKVDIC+F FDIMFANG
Sbjct: 1106 NGYRIMSFQELSSRGRGGKDTLVTSESIKVDICIFVFDIMFANG 1149


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