BLASTX nr result

ID: Bupleurum21_contig00028979 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00028979
         (981 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI19025.3| unnamed protein product [Vitis vinifera]              295   9e-78
ref|XP_002284482.2| PREDICTED: sister chromatid cohesion protein...   269   9e-70
ref|XP_002513802.1| androgen induced inhibitor of proliferation ...   247   4e-63
gb|ACD56617.1| hypothetical binding protein [Gossypioides kirkii]     244   2e-62
ref|XP_003543800.1| PREDICTED: sister chromatid cohesion protein...   219   6e-55

>emb|CBI19025.3| unnamed protein product [Vitis vinifera]
          Length = 1450

 Score =  295 bits (756), Expect = 9e-78
 Identities = 159/326 (48%), Positives = 211/326 (64%)
 Frame = -3

Query: 979  SKFFLDPAKTEECLVRLDQAKDYVLYKRLEEVLNEVTIQSGQDLVDNLMRESRNQHPDTE 800
            S  F D  K EEC  +L+Q KD  ++K L ++L+EVT+ S +   D  ++    +HP  E
Sbjct: 532  SASFPDSCKAEECFHKLNQMKDNSIFKALLQLLDEVTLTSAETTRDKFLKMIGERHPHFE 591

Query: 799  FLQLLLKKCLYNIFSSEHVSCILNQLSGEISVEDYLKHSSMKLLQIIISNFPSLVRGLEE 620
            FLQ L KKCL+NIFSSEHV CIL  +S       +L+ SS  LL +I+S FPSL++G E+
Sbjct: 592  FLQSLSKKCLFNIFSSEHVRCILEHISSNRVGNKHLEVSSFDLLLVIVSIFPSLLKGSEK 651

Query: 619  QLCCFLLQDDIPLNEELIRMIAKAGPYVSYKLSDLYPSLERVCLEGTRTQSKLXXXXXXX 440
                 L ++DIP  E+LI+++ KAGP++S KLSD+YPSLE++CLEG+R QSK        
Sbjct: 652  LFQMLLFKEDIPFQEKLIQVLGKAGPHISIKLSDIYPSLEKICLEGSRAQSKFAVSAIAA 711

Query: 439  XXXXXXXXIFTKLCKKLVDALENGQNIPTVLQSLGCVSQYSAPTFEANLQEIIQYIVEKI 260
                    +F++LCK LVD+L  GQNIPTVLQSLGC++Q+S   FEA  +EI  YI E  
Sbjct: 712  LVGTSEQFVFSELCKALVDSLHGGQNIPTVLQSLGCMAQHSVSAFEARDKEITSYINETF 771

Query: 259  FQVEVSGDLNAFEKISEHASLSRLKIFGLKALVKSCLPHQRTHTCHHISKLLHEILRMLQ 80
            FQVE   +L +F++ SE +S  +LKI+ LKALV+S LPH+ TH    I+ LL  +  ML 
Sbjct: 772  FQVEPLDNLASFDETSECSSSCKLKIYALKALVRSFLPHRGTHVKRQINDLLDIMSEMLP 831

Query: 79   KADCSYVTESCETSSLKINLAAAKSV 2
            K D SY T SCE     I LAAAKSV
Sbjct: 832  KGDISYDTGSCENDEAHIRLAAAKSV 857


>ref|XP_002284482.2| PREDICTED: sister chromatid cohesion protein PDS5 homolog A-like
            [Vitis vinifera]
          Length = 1305

 Score =  269 bits (687), Expect = 9e-70
 Identities = 150/326 (46%), Positives = 196/326 (60%)
 Frame = -3

Query: 979  SKFFLDPAKTEECLVRLDQAKDYVLYKRLEEVLNEVTIQSGQDLVDNLMRESRNQHPDTE 800
            S  F D  K EEC  +L+Q KD  ++K L ++L+EVT+ S +   D  ++    +HP  E
Sbjct: 532  SASFPDSCKAEECFHKLNQMKDNSIFKALLQLLDEVTLTSAETTRDKFLKMIGERHPHFE 591

Query: 799  FLQLLLKKCLYNIFSSEHVSCILNQLSGEISVEDYLKHSSMKLLQIIISNFPSLVRGLEE 620
            FLQ L KKCL+NIFSSEHV CIL  +S       +L+ SS  LL +I+S FPSL++G E+
Sbjct: 592  FLQSLSKKCLFNIFSSEHVRCILEHISSNRVGNKHLEVSSFDLLLVIVSIFPSLLKGSEK 651

Query: 619  QLCCFLLQDDIPLNEELIRMIAKAGPYVSYKLSDLYPSLERVCLEGTRTQSKLXXXXXXX 440
                 L ++DIP  E+LI+++ KAGP++S KLSD+YPSLE++CLEG+R QSK        
Sbjct: 652  LFQMLLFKEDIPFQEKLIQVLGKAGPHISIKLSDIYPSLEKICLEGSRAQSKFAVSAIAA 711

Query: 439  XXXXXXXXIFTKLCKKLVDALENGQNIPTVLQSLGCVSQYSAPTFEANLQEIIQYIVEKI 260
                    +F++LCK LVD+L  GQNIPTVLQSLGC++Q+S   FEA  +EI  YI E  
Sbjct: 712  LVGTSEQFVFSELCKALVDSLHGGQNIPTVLQSLGCMAQHSVSAFEARDKEITSYINETF 771

Query: 259  FQVEVSGDLNAFEKISEHASLSRLKIFGLKALVKSCLPHQRTHTCHHISKLLHEILRMLQ 80
            FQ                       I+ LKALV+S LPH+ TH    I+ LL  +  ML 
Sbjct: 772  FQ-----------------------IYALKALVRSFLPHRGTHVKRQINDLLDIMSEMLP 808

Query: 79   KADCSYVTESCETSSLKINLAAAKSV 2
            K D SY T SCE     I LAAAKSV
Sbjct: 809  KGDISYDTGSCENDEAHIRLAAAKSV 834


>ref|XP_002513802.1| androgen induced inhibitor of proliferation (as3) / pds5, putative
            [Ricinus communis] gi|223546888|gb|EEF48385.1| androgen
            induced inhibitor of proliferation (as3) / pds5, putative
            [Ricinus communis]
          Length = 1332

 Score =  247 bits (630), Expect = 4e-63
 Identities = 146/326 (44%), Positives = 188/326 (57%)
 Frame = -3

Query: 979  SKFFLDPAKTEECLVRLDQAKDYVLYKRLEEVLNEVTIQSGQDLVDNLMRESRNQHPDTE 800
            S  F DP+K EEC  +L+Q KD  ++  LE +L E TI + Q   D  ++   ++HP  E
Sbjct: 544  SASFPDPSKAEECFHKLNQMKDNNIFNSLELLLVERTIINAQTTRDKFLKMIGDKHPHFE 603

Query: 799  FLQLLLKKCLYNIFSSEHVSCILNQLSGEISVEDYLKHSSMKLLQIIISNFPSLVRGLEE 620
            FLQLL  KC +NIFSSEHV CIL+ LS +      L+ SS  LL  II+ FPSL+RG EE
Sbjct: 604  FLQLLSSKCSFNIFSSEHVRCILDHLSSDAVGNGRLEASSANLLLTIINVFPSLLRGFEE 663

Query: 619  QLCCFLLQDDIPLNEELIRMIAKAGPYVSYKLSDLYPSLERVCLEGTRTQSKLXXXXXXX 440
            Q    LLQ+   +N+ LI  +AKAGPY+S K SD YP LE  CLEGTR QSK        
Sbjct: 664  QF-RLLLQEKNMINDVLIEALAKAGPYISVKFSDFYPLLESACLEGTRIQSKQAVSAIAS 722

Query: 439  XXXXXXXXIFTKLCKKLVDALENGQNIPTVLQSLGCVSQYSAPTFEANLQEIIQYIVEKI 260
                    IF+KLCK+LVD+L  G N PT+LQSLGC++Q+S   FE+  +EI  YI ++I
Sbjct: 723  LIGSSEQLIFSKLCKELVDSLHRGWNTPTILQSLGCIAQHSVAAFESKYREIRSYIFQRI 782

Query: 259  FQVEVSGDLNAFEKISEHASLSRLKIFGLKALVKSCLPHQRTHTCHHISKLLHEILRMLQ 80
            FQ                       I+G+K LVKS LPHQ +H    I +LL  +L++LQ
Sbjct: 783  FQ-----------------------IYGVKTLVKSFLPHQGSHVNRQIDELLDILLKLLQ 819

Query: 79   KADCSYVTESCETSSLKINLAAAKSV 2
              D      +C      + LAAAKSV
Sbjct: 820  TGDAIDGIITCVNDKPHVRLAAAKSV 845


>gb|ACD56617.1| hypothetical binding protein [Gossypioides kirkii]
          Length = 866

 Score =  244 bits (624), Expect = 2e-62
 Identities = 134/303 (44%), Positives = 192/303 (63%)
 Frame = -3

Query: 979  SKFFLDPAKTEECLVRLDQAKDYVLYKRLEEVLNEVTIQSGQDLVDNLMRESRNQHPDTE 800
            S  F DP+K EEC  +L Q KD  ++  L ++L+EVT++S   + D  +    N+HP  E
Sbjct: 544  SASFPDPSKAEECFDKLSQMKDNKIFSSLGQLLDEVTLKSA--VADKFLEVIGNKHPHYE 601

Query: 799  FLQLLLKKCLYNIFSSEHVSCILNQLSGEISVEDYLKHSSMKLLQIIISNFPSLVRGLEE 620
            FL LL  KCL+N+F SEHVSCILN +S      ++L+  S++LL +IISNFPSL+RG E 
Sbjct: 602  FLLLLCSKCLFNVFDSEHVSCILNLISSGGLESNHLEAFSIELLLVIISNFPSLMRGSEL 661

Query: 619  QLCCFLLQDDIPLNEELIRMIAKAGPYVSYKLSDLYPSLERVCLEGTRTQSKLXXXXXXX 440
            +L   L +    +++++I+++ KAGP++S K  D YP L+R+CLEG R QSK        
Sbjct: 662  EL-RLLFEKKYLIHDKIIQVLVKAGPHISVKFCDFYPVLKRICLEGPRPQSKYAVSAIAS 720

Query: 439  XXXXXXXXIFTKLCKKLVDALENGQNIPTVLQSLGCVSQYSAPTFEANLQEIIQYIVEKI 260
                    +F++LC++LVD+L  G N  TVLQSLGC++QYS  TFE + +EI QY+ + I
Sbjct: 721  LIDVSEPYVFSELCEELVDSLHRGWNTATVLQSLGCIAQYSVSTFEHHDKEITQYVYKNI 780

Query: 259  FQVEVSGDLNAFEKISEHASLSRLKIFGLKALVKSCLPHQRTHTCHHISKLLHEILRMLQ 80
            FQ +   D +  E  S   +  +LKI+GLK LVKS LPH+ +     I+ LL  +L+MLQ
Sbjct: 781  FQAKSLDDPSVIED-SSSCTTCKLKIYGLKMLVKSFLPHRGSQISRQINSLLGTLLKMLQ 839

Query: 79   KAD 71
            K D
Sbjct: 840  KED 842


>ref|XP_003543800.1| PREDICTED: sister chromatid cohesion protein PDS5 homolog A-like
            [Glycine max]
          Length = 1300

 Score =  219 bits (559), Expect = 6e-55
 Identities = 134/327 (40%), Positives = 194/327 (59%), Gaps = 3/327 (0%)
 Frame = -3

Query: 973  FFLDPAKTEECLVRLDQAKDYVLYKRLEEVLNEVTIQS-GQDLVDNLMRESRNQHPDTEF 797
            FF D  K EECL +L+Q KD  ++K LE++L E    + GQ + D  +    + +P+ EF
Sbjct: 548  FFPDSHKAEECLHKLNQIKDNSVFKLLEKLLEEQAFTTIGQTMKDKHLVMIGDSNPNYEF 607

Query: 796  LQLLLKKCLYNIFSSEHVSCILNQLSGEISVEDYLKHSSMKLLQIIISNFPSLVRGLEEQ 617
            L+LL  KC  NIFSSEHV CIL+ LS   +    L+ SS  LL  I+ NFPS+++GLE+Q
Sbjct: 608  LRLLFSKCSSNIFSSEHVKCILDYLSNNENGNKDLEDSSANLLLAIVRNFPSMLKGLEKQ 667

Query: 616  LCCFLLQDDIPLNEELIRMIAKAGPYVSYKLSDLYPSLERVCLEGTRTQSKLXXXXXXXX 437
                LL+   P+N++LI +IAKAG ++S+  SD+YP L+R+CL+GTR Q+K         
Sbjct: 668  F-QKLLEQKSPVNDKLIEVIAKAGSHMSFNHSDIYPLLKRICLDGTRRQAKF--AGSAIA 724

Query: 436  XXXXXXXIFTKLCKKLVDALENGQNIPTVLQSLGCVSQYSAPTFEANLQEIIQYIVEKIF 257
                   +F KL ++LVD+L + +N+PT+LQSLG ++QYS   FE  ++EI  YI +KI 
Sbjct: 725  ALSFEQSVFRKLYEELVDSLYSKRNVPTILQSLGFIAQYSVSNFETQVEEITSYICQKII 784

Query: 256  QVEVSGDLNAFEKISEHASLSRLKIFGLKALVKSCLPHQRTHTCHHISKLLHEILRMLQK 77
            Q                       I+GLK LVK  L  + +H  H+I+ +L  + RML++
Sbjct: 785  Q-----------------------IYGLKTLVKISLHCEGSHVKHNINGVLDILSRMLRE 821

Query: 76   AD--CSYVTESCETSSLKINLAAAKSV 2
            +D   S  T SCE+    I LAAAK++
Sbjct: 822  SDNFISIATGSCESDKAHIRLAAAKAI 848


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