BLASTX nr result

ID: Bupleurum21_contig00028974 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00028974
         (520 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABA95283.1| retrotransposon protein, putative, unclassified, ...   231   6e-59
gb|EEC67008.1| hypothetical protein OsI_33720 [Oryza sativa Indi...   231   6e-59
emb|CAH66177.1| OSIGBa0130O15.1 [Oryza sativa Indica Group] gi|1...   231   6e-59
ref|NP_001068460.1| Os11g0682500 [Oryza sativa Japonica Group] g...   231   6e-59
gb|AAP53887.2| retrotransposon protein, putative, Ty1-copia subc...   231   6e-59

>gb|ABA95283.1| retrotransposon protein, putative, unclassified, expressed [Oryza
            sativa Japonica Group] gi|215767919|dbj|BAH00148.1|
            unnamed protein product [Oryza sativa Japonica Group]
          Length = 1369

 Score =  231 bits (588), Expect = 6e-59
 Identities = 111/164 (67%), Positives = 134/164 (81%)
 Frame = +3

Query: 27   DELMLLKIEGPTSYHEAKEEKEWQKAMELEFETIEKNGTWTLTNLPPGHKPIGLKWVYKQ 206
            +ELM++  E P ++ +A+ +++W++AM  E  +IE+N TW L +LP GH+PIGLKWVYK 
Sbjct: 853  EELMMVSGEEPATFAQAERDEDWRRAMLDEISSIEENKTWRLVDLPSGHRPIGLKWVYKL 912

Query: 207  KKDPEGNVVKHKARRVAKGYVQRKGINYDEVLTPVARLDSVRLLLALAAKEGWRVHHLDV 386
            KKD +G VVKHKAR VAKGYVQR GI++DEV  PVARLDSVRLLLALAA+EGW VHH+DV
Sbjct: 913  KKDAQGVVVKHKARLVAKGYVQRAGIDFDEVFAPVARLDSVRLLLALAAQEGWMVHHMDV 972

Query: 387  KAAFLNGELLEEVYVTQPEGFVKKGQEQMVYRLTKALYGLRQAP 518
            K+AFLNGEL+EEVYV QP GF   GQE  VYRL KALYGLRQAP
Sbjct: 973  KSAFLNGELIEEVYVVQPPGFEIDGQENKVYRLDKALYGLRQAP 1016


>gb|EEC67008.1| hypothetical protein OsI_33720 [Oryza sativa Indica Group]
          Length = 1068

 Score =  231 bits (588), Expect = 6e-59
 Identities = 111/164 (67%), Positives = 134/164 (81%)
 Frame = +3

Query: 27   DELMLLKIEGPTSYHEAKEEKEWQKAMELEFETIEKNGTWTLTNLPPGHKPIGLKWVYKQ 206
            +ELM++  E P ++ +A+ +++W++AM  E  +IE+N TW L +LP GH+PIGLKWVYK 
Sbjct: 552  EELMMVSGEEPATFAQAERDEDWRRAMLDEISSIEENKTWRLVDLPSGHRPIGLKWVYKL 611

Query: 207  KKDPEGNVVKHKARRVAKGYVQRKGINYDEVLTPVARLDSVRLLLALAAKEGWRVHHLDV 386
            KKD +G VVKHKAR VAKGYVQR GI++DEV  PVARLDSVRLLLALAA+EGW VHH+DV
Sbjct: 612  KKDAQGVVVKHKARLVAKGYVQRAGIDFDEVFAPVARLDSVRLLLALAAQEGWMVHHMDV 671

Query: 387  KAAFLNGELLEEVYVTQPEGFVKKGQEQMVYRLTKALYGLRQAP 518
            K+AFLNGEL+EEVYV QP GF   GQE  VYRL KALYGLRQAP
Sbjct: 672  KSAFLNGELIEEVYVVQPPGFEIDGQENKVYRLDKALYGLRQAP 715


>emb|CAH66177.1| OSIGBa0130O15.1 [Oryza sativa Indica Group]
            gi|116309095|emb|CAH66202.1| OSIGBa0148D14.8 [Oryza
            sativa Indica Group]
          Length = 1439

 Score =  231 bits (588), Expect = 6e-59
 Identities = 111/164 (67%), Positives = 134/164 (81%)
 Frame = +3

Query: 27   DELMLLKIEGPTSYHEAKEEKEWQKAMELEFETIEKNGTWTLTNLPPGHKPIGLKWVYKQ 206
            +ELM++  E P ++ +A+ +++W++AM  E  +IE+N TW L +LP GH+PIGLKWVYK 
Sbjct: 913  EELMMVSGEEPATFAQAERDEDWRRAMLDEISSIEENKTWRLVDLPSGHRPIGLKWVYKL 972

Query: 207  KKDPEGNVVKHKARRVAKGYVQRKGINYDEVLTPVARLDSVRLLLALAAKEGWRVHHLDV 386
            KKD +G VVKHKAR VAKGYVQR GI++DEV  PVARLDSVRLLLALAA+EGW VHH+DV
Sbjct: 973  KKDAQGVVVKHKARLVAKGYVQRAGIDFDEVFAPVARLDSVRLLLALAAQEGWMVHHMDV 1032

Query: 387  KAAFLNGELLEEVYVTQPEGFVKKGQEQMVYRLTKALYGLRQAP 518
            K+AFLNGEL+EEVYV QP GF   GQE  VYRL KALYGLRQAP
Sbjct: 1033 KSAFLNGELIEEVYVVQPPGFEIDGQENKVYRLDKALYGLRQAP 1076


>ref|NP_001068460.1| Os11g0682500 [Oryza sativa Japonica Group]
            gi|113645682|dbj|BAF28823.1| Os11g0682500, partial [Oryza
            sativa Japonica Group]
          Length = 1457

 Score =  231 bits (588), Expect = 6e-59
 Identities = 111/164 (67%), Positives = 134/164 (81%)
 Frame = +3

Query: 27   DELMLLKIEGPTSYHEAKEEKEWQKAMELEFETIEKNGTWTLTNLPPGHKPIGLKWVYKQ 206
            +ELM++  E P ++ +A+ +++W++AM  E  +IE+N TW L +LP GH+PIGLKWVYK 
Sbjct: 941  EELMMVSGEEPATFAQAERDEDWRRAMLDEISSIEENKTWRLVDLPSGHRPIGLKWVYKL 1000

Query: 207  KKDPEGNVVKHKARRVAKGYVQRKGINYDEVLTPVARLDSVRLLLALAAKEGWRVHHLDV 386
            KKD +G VVKHKAR VAKGYVQR GI++DEV  PVARLDSVRLLLALAA+EGW VHH+DV
Sbjct: 1001 KKDAQGVVVKHKARLVAKGYVQRAGIDFDEVFAPVARLDSVRLLLALAAQEGWMVHHMDV 1060

Query: 387  KAAFLNGELLEEVYVTQPEGFVKKGQEQMVYRLTKALYGLRQAP 518
            K+AFLNGEL+EEVYV QP GF   GQE  VYRL KALYGLRQAP
Sbjct: 1061 KSAFLNGELIEEVYVVQPPGFEIDGQENKVYRLDKALYGLRQAP 1104


>gb|AAP53887.2| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 1805

 Score =  231 bits (588), Expect = 6e-59
 Identities = 111/164 (67%), Positives = 134/164 (81%)
 Frame = +3

Query: 27   DELMLLKIEGPTSYHEAKEEKEWQKAMELEFETIEKNGTWTLTNLPPGHKPIGLKWVYKQ 206
            +ELM++  E P ++ +A+ +++W++AM  E  +IE+N TW L +LP GH+PIGLKWVYK 
Sbjct: 1109 EELMMVSGEEPATFGQAERDEDWRRAMLDEISSIEENKTWRLVDLPSGHRPIGLKWVYKL 1168

Query: 207  KKDPEGNVVKHKARRVAKGYVQRKGINYDEVLTPVARLDSVRLLLALAAKEGWRVHHLDV 386
            KKD +G VVKHKAR VAKGYVQR GI++DEV  PVARLDSVRLLLALAA+EGW VHH+DV
Sbjct: 1169 KKDAQGVVVKHKARLVAKGYVQRAGIDFDEVFAPVARLDSVRLLLALAAQEGWMVHHMDV 1228

Query: 387  KAAFLNGELLEEVYVTQPEGFVKKGQEQMVYRLTKALYGLRQAP 518
            K+AFLNGEL+EEVYV QP GF   GQE  VYRL KALYGLRQAP
Sbjct: 1229 KSAFLNGELIEEVYVVQPPGFEIDGQENKVYRLDKALYGLRQAP 1272


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