BLASTX nr result

ID: Bupleurum21_contig00028968 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00028968
         (567 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003633429.1| PREDICTED: uncharacterized protein LOC100852...   147   2e-33
emb|CBI25316.3| unnamed protein product [Vitis vinifera]              141   6e-32
ref|XP_003535782.1| PREDICTED: uncharacterized protein LOC100817...   116   3e-24
ref|XP_002311130.1| predicted protein [Populus trichocarpa] gi|2...   115   4e-24
ref|XP_003555628.1| PREDICTED: uncharacterized protein LOC100803...   112   3e-23

>ref|XP_003633429.1| PREDICTED: uncharacterized protein LOC100852618 [Vitis vinifera]
          Length = 324

 Score =  147 bits (370), Expect = 2e-33
 Identities = 82/190 (43%), Positives = 115/190 (60%), Gaps = 3/190 (1%)
 Frame = -2

Query: 566 RHDE-FTRDISEDCTSPIVSSSRPTYQRFISRFDRSNRYLSNIQSKNLPQIRSKSPVRFE 390
           RH E F R + +D   P+ +  +P ++     F + NR  S+IQ +  P+I SKSP+R  
Sbjct: 26  RHSEKFIRGLRDDIVEPVFTRQQPPFEGVEGHFVQGNRNFSSIQRRGPPRIHSKSPMR-- 83

Query: 389 AHPDGPWSSPRRGSPDGLNEFQELTQKRSKTTCGMEMPRSPGHRSFGLERVSRRCDSPSY 210
           +   GPWSSPRR SPDG N   ELT +RS     M+  RSP    F  E V+RR  SP +
Sbjct: 84  SGSPGPWSSPRRRSPDGFNGHPELTHRRSPAVYRMDRMRSPDRPCFPEEIVARRHGSPPF 143

Query: 209 LAQPSPNFLNVDTRR-MDRPRSTNPDKRIPSNRNIPKNTGRLDIVDPRERIDNEEYCG-P 36
           L +PS +  ++D+ R    PRS  P++R PS R + +N+ R DI++PRER D++E+ G P
Sbjct: 144 LPRPSNDLRDMDSARDHGPPRSVIPNRRSPSGRILLRNSRRFDIIEPRERTDSDEFFGPP 203

Query: 35  VHSGSVHELG 6
           +HSG  HELG
Sbjct: 204 MHSGRFHELG 213


>emb|CBI25316.3| unnamed protein product [Vitis vinifera]
          Length = 530

 Score =  141 bits (356), Expect = 6e-32
 Identities = 78/183 (42%), Positives = 110/183 (60%), Gaps = 2/183 (1%)
 Frame = -2

Query: 548 RDISEDCTSPIVSSSRPTYQRFISRFDRSNRYLSNIQSKNLPQIRSKSPVRFEAHPDGPW 369
           R   +D   P+ +  +P ++     F + NR  S+IQ +  P+I SKSP+R  +   GPW
Sbjct: 208 RSPGDDIVEPVFTRQQPPFEGVEGHFVQGNRNFSSIQRRGPPRIHSKSPMR--SGSPGPW 265

Query: 368 SSPRRGSPDGLNEFQELTQKRSKTTCGMEMPRSPGHRSFGLERVSRRCDSPSYLAQPSPN 189
           SSPRR SPDG N   ELT +RS     M+  RSP    F  E V+RR  SP +L +PS +
Sbjct: 266 SSPRRRSPDGFNGHPELTHRRSPAVYRMDRMRSPDRPCFPEEIVARRHGSPPFLPRPSND 325

Query: 188 FLNVDTRR-MDRPRSTNPDKRIPSNRNIPKNTGRLDIVDPRERIDNEEYCG-PVHSGSVH 15
             ++D+ R    PRS  P++R PS R + +N+ R DI++PRER D++E+ G P+HSG  H
Sbjct: 326 LRDMDSARDHGPPRSVIPNRRSPSGRILLRNSRRFDIIEPRERTDSDEFFGPPMHSGRFH 385

Query: 14  ELG 6
           ELG
Sbjct: 386 ELG 388


>ref|XP_003535782.1| PREDICTED: uncharacterized protein LOC100817471 [Glycine max]
          Length = 1396

 Score =  116 bits (290), Expect = 3e-24
 Identities = 75/194 (38%), Positives = 108/194 (55%), Gaps = 8/194 (4%)
 Frame = -2

Query: 566  RHDE-FTRDISEDCTSPIVSSSRPTYQRFISRFDRSNRYLSNIQSKNLPQIRSKSPVRFE 390
            RH+E F R + ED    + +  + T++    RF R +R  S++Q +  PQIRSKSP+R  
Sbjct: 1077 RHNEKFMRSLPEDNMDAMFTRPQ-TFEGMDGRFTRGSRNFSSMQRRGPPQIRSKSPIRSR 1135

Query: 389  AHPDGPWSSP-----RRGSPDGLNEFQELTQKRSKTTCGMEMPRSPGHRSFGLERVSRRC 225
            +   GPWSSP     RR SPDG     ELT +RS     ++  RSP    F  ERV RR 
Sbjct: 1136 SRSPGPWSSPRRRSPRRRSPDGFGGHPELTHRRS-PFYRVDRMRSPDRPVFPAERVVRRH 1194

Query: 224  DSPSYLAQPSPNFLNVDTRRMDRPRSTNPDKRIPSNRNIPKNTGRLDIVDPRERIDNEE- 48
             SPS++++PS +  ++D+ R         D   P +  I     R D+VDPR+R+DN++ 
Sbjct: 1195 GSPSFMSRPSNDMRDMDSAR---------DHGHPRSGRILIRNRRFDVVDPRDRVDNDDE 1245

Query: 47   -YCGPVHSGSVHEL 9
             + GP+HSG + EL
Sbjct: 1246 YFGGPMHSGRLLEL 1259


>ref|XP_002311130.1| predicted protein [Populus trichocarpa] gi|222850950|gb|EEE88497.1|
            predicted protein [Populus trichocarpa]
          Length = 1370

 Score =  115 bits (289), Expect = 4e-24
 Identities = 74/189 (39%), Positives = 98/189 (51%), Gaps = 2/189 (1%)
 Frame = -2

Query: 566  RHDEFTRDISEDCTSPIVSSSRPTYQRFISRFDRSNRYLSNIQSKNLPQIRSKSPVRFEA 387
            RH E  R   +D T       +P+Y+     F +  R  S++  + LPQ RSKSP+R  +
Sbjct: 1028 RHTENMRGFPDDGTEQAFRRPQPSYEGLDGHFVQGTRNYSSVHRRALPQFRSKSPIR--S 1085

Query: 386  HPDGPWSSPRRGSPDGLNEFQELTQKRSKTTCGMEMPRSPGHRSFGLERVSRRCDSPSYL 207
               GPWSS RR SPDG     EL+ +RS     M   RSP H  F  E V RR  SP +L
Sbjct: 1086 RSPGPWSSARRRSPDGFGGTSELSNRRS-PIYSMGRIRSPDHPGFPREMVVRRHGSPPFL 1144

Query: 206  AQPSPNFLNVDTRRMDRPRSTN-PDKRIPSNRNIPKNTGRLDIVDPRERIDNEEYC-GPV 33
            ++P       DTR  D   S +    R  + R   +N+ R  I DPRER D++E+  GP+
Sbjct: 1145 SRPP------DTRETDPGHSRSIISNRGQTGRVFLRNSRRFGITDPRERADSDEFFGGPI 1198

Query: 32   HSGSVHELG 6
            HSG  H+LG
Sbjct: 1199 HSGRFHDLG 1207


>ref|XP_003555628.1| PREDICTED: uncharacterized protein LOC100803295 [Glycine max]
          Length = 1378

 Score =  112 bits (281), Expect = 3e-23
 Identities = 71/192 (36%), Positives = 107/192 (55%), Gaps = 7/192 (3%)
 Frame = -2

Query: 563  HDEFTRDISEDCTSPIVSSSRPTYQRFISRFDRSNRYLSNIQSKNLPQIRSKSPVRFEAH 384
            +D+F R + ED    + + S+ T++    RF R +R  S++Q +  P+IRSKSP+R  + 
Sbjct: 1078 NDKFMRGLPEDNMDAMFTRSQ-TFEGMDGRFTRGSRNFSSMQRRGPPRIRSKSPIRSRSR 1136

Query: 383  PDGPWSSP-----RRGSPDGLNEFQELTQKRSKTTCGMEMPRSPGHRSFGLERVSRRCDS 219
              GPWSSP     RR SPDG     EL+ +RS     ++  RSP    F  ERV RR  S
Sbjct: 1137 SPGPWSSPRRRSPRRRSPDGFGGHPELSHRRS-PFYRVDRMRSPDRPVFPAERVVRRHGS 1195

Query: 218  PSYLAQPSPNFLNVDTRRMDRPRSTNPDKRIPSNRNIPKNTGRLDIVDPRERIDNEE--Y 45
            PS++++PS +  ++D+ R         D   P +  I     R D+VDPR+R +N++  +
Sbjct: 1196 PSFMSRPSNDMRDIDSAR---------DHGHPRSGRILIRNRRFDVVDPRDRAENDDEYF 1246

Query: 44   CGPVHSGSVHEL 9
             GP+HSG + EL
Sbjct: 1247 GGPMHSGRLLEL 1258


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