BLASTX nr result

ID: Bupleurum21_contig00028952 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00028952
         (492 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002317313.1| predicted protein [Populus trichocarpa] gi|2...    81   1e-13
gb|AFN53716.1| putative DUF584 protein [Linum usitatissimum]           78   7e-13
ref|NP_565785.1| uncharacterized protein [Arabidopsis thaliana] ...    78   7e-13
ref|XP_002522299.1| conserved hypothetical protein [Ricinus comm...    76   3e-12
ref|XP_002881332.1| hypothetical protein ARALYDRAFT_482377 [Arab...    75   4e-12

>ref|XP_002317313.1| predicted protein [Populus trichocarpa] gi|222860378|gb|EEE97925.1|
           predicted protein [Populus trichocarpa]
          Length = 123

 Score = 80.9 bits (198), Expect = 1e-13
 Identities = 50/127 (39%), Positives = 69/127 (54%)
 Frame = +3

Query: 3   QESDIIFQDNVSNSYEDANSSAICVGVCSNYKKSRNDDEYFKRKKESVPINIPQVHFDNG 182
           QES++IF D+     +  N   +  GV SN  K     +  +++  SVP++IP   F   
Sbjct: 6   QESEVIFSDHEHGCKKYFNYQEM--GVFSNNNKKVKKKK--QKQSSSVPVSIPNREFQ-- 59

Query: 183 LGYHXXXXXXXXXXXXXGAITPPHVILGRRIVRKMAFSVSIGNGRALKGRQLSEIRDSIL 362
                              + PPH+I+ RRI  KMAFSV  GNGR LKGR LSE+R+SIL
Sbjct: 60  ----LSDSDDFEEDYGGDDLVPPHIIVERRIAGKMAFSVRTGNGRTLKGRDLSEVRNSIL 115

Query: 363 RLTGFID 383
           R+TGF++
Sbjct: 116 RMTGFLE 122


>gb|AFN53716.1| putative DUF584 protein [Linum usitatissimum]
          Length = 114

 Score = 78.2 bits (191), Expect = 7e-13
 Identities = 40/86 (46%), Positives = 54/86 (62%)
 Frame = +3

Query: 126 KRKKESVPINIPQVHFDNGLGYHXXXXXXXXXXXXXGAITPPHVILGRRIVRKMAFSVSI 305
           +++K SVP+NIP+ +                       + PPHVILGRR+  KMAFSV  
Sbjct: 35  RKQKSSVPVNIPRNNV-------FRFGDSEEEYEDSDELVPPHVILGRRVAGKMAFSVCT 87

Query: 306 GNGRALKGRQLSEIRDSILRLTGFID 383
           GNGR LKGR LS++R+SILR+TGF++
Sbjct: 88  GNGRTLKGRDLSQVRNSILRMTGFLE 113


>ref|NP_565785.1| uncharacterized protein [Arabidopsis thaliana]
           gi|3337365|gb|AAC27410.1| expressed protein [Arabidopsis
           thaliana] gi|21555794|gb|AAM63935.1| unknown
           [Arabidopsis thaliana] gi|26451952|dbj|BAC43068.1|
           unknown protein [Arabidopsis thaliana]
           gi|28416871|gb|AAO42966.1| At2g34340 [Arabidopsis
           thaliana] gi|330253866|gb|AEC08960.1| uncharacterized
           protein [Arabidopsis thaliana]
          Length = 136

 Score = 78.2 bits (191), Expect = 7e-13
 Identities = 47/130 (36%), Positives = 71/130 (54%), Gaps = 4/130 (3%)
 Frame = +3

Query: 6   ESDIIFQDNVSNSYEDANSSAICVGVCSNYKKSRNDDEYFKRK---KESVPINIPQVHFD 176
           ES+++F D +S+     N + +  G     KK+R        K     S+P++IP+  F 
Sbjct: 7   ESEVVFSDGLSSVLHKENENRL-FGSDMERKKTRRIKRTTTEKASLSSSLPVSIPENIFR 65

Query: 177 NGLGYHXXXXXXXXXXXXXGAITPPHVILGRRIVR-KMAFSVSIGNGRALKGRQLSEIRD 353
             +G               G + PPH+++GRRI   +MAFSV  G+GR LKGR LS +R+
Sbjct: 66  RYVGKEEDEYSEEEYSEGGGEMIPPHIMIGRRIQGGQMAFSVCSGSGRTLKGRDLSRVRN 125

Query: 354 SILRLTGFID 383
           S+LRLTGF++
Sbjct: 126 SVLRLTGFLE 135


>ref|XP_002522299.1| conserved hypothetical protein [Ricinus communis]
           gi|223538552|gb|EEF40157.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 121

 Score = 75.9 bits (185), Expect = 3e-12
 Identities = 49/128 (38%), Positives = 65/128 (50%), Gaps = 1/128 (0%)
 Frame = +3

Query: 3   QESDIIFQDNVSNSYEDANSSAICVGVCSNYKKSRNDDEYFKRKKESVPINIPQVHFDNG 182
           +ES++IF +    S    N        CS   K +      K+ + S P+NIP   F   
Sbjct: 6   EESEVIFSEEHDKSSLCRNRETEYDDSCSRKGKKKKQ----KKSRSSGPVNIPSNMFQ-- 59

Query: 183 LGYHXXXXXXXXXXXXXGAITPPHVILGRRIVRK-MAFSVSIGNGRALKGRQLSEIRDSI 359
                              + PPHVI+GRRI  K MAFS+  GNGR LKGR LS++R+SI
Sbjct: 60  -------LTTDTDDQFDDELVPPHVIIGRRIEGKLMAFSLCSGNGRTLKGRDLSQVRNSI 112

Query: 360 LRLTGFID 383
           LRLTGF++
Sbjct: 113 LRLTGFLE 120


>ref|XP_002881332.1| hypothetical protein ARALYDRAFT_482377 [Arabidopsis lyrata subsp.
           lyrata] gi|297327171|gb|EFH57591.1| hypothetical protein
           ARALYDRAFT_482377 [Arabidopsis lyrata subsp. lyrata]
          Length = 134

 Score = 75.5 bits (184), Expect = 4e-12
 Identities = 49/129 (37%), Positives = 69/129 (53%), Gaps = 3/129 (2%)
 Frame = +3

Query: 6   ESDIIFQDNVSNSYEDANSSAICVGVCSNYKKSR--NDDEYFKRKKESVPINIPQVHFDN 179
           ES+I+F D  S+ +   N   +  G     KK R        K    S+P+NIP+  F  
Sbjct: 7   ESEIVFSDGFSSVHHKENKKRL-FGSDMEMKKKRWIKMTTTDKALSSSLPVNIPENMFRR 65

Query: 180 GLGYHXXXXXXXXXXXXXGAITPPHVILGRRIVR-KMAFSVSIGNGRALKGRQLSEIRDS 356
            +G               G + PPH+++GRRI   +MAFSV  G+GR LKGR LS +R+S
Sbjct: 66  YVGKEEDDYSKEEYSDV-GEMVPPHIMVGRRIQGGQMAFSVCSGSGRTLKGRDLSRVRNS 124

Query: 357 ILRLTGFID 383
           +LRLTGF++
Sbjct: 125 VLRLTGFLE 133


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