BLASTX nr result

ID: Bupleurum21_contig00028944 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00028944
         (290 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004149426.1| PREDICTED: zinc finger CCCH domain-containin...    79   3e-13
ref|XP_002522169.1| RING finger protein 113A, putative [Ricinus ...    79   3e-13
ref|XP_003525380.1| PREDICTED: zinc finger CCCH domain-containin...    77   1e-12
ref|XP_002320858.1| predicted protein [Populus trichocarpa] gi|2...    77   1e-12
ref|XP_003625944.1| Zinc finger CCCH domain-containing protein [...    77   1e-12

>ref|XP_004149426.1| PREDICTED: zinc finger CCCH domain-containing protein 1-like
           [Cucumis sativus]
          Length = 322

 Score = 79.3 bits (194), Expect = 3e-13
 Identities = 32/33 (96%), Positives = 32/33 (96%)
 Frame = -3

Query: 288 HYFCEHCALKHHAKNKKCFVCNTPTLGIFNTAH 190
           HYFCEHCALKHHAKNKKCFVCN PTLGIFNTAH
Sbjct: 280 HYFCEHCALKHHAKNKKCFVCNQPTLGIFNTAH 312


>ref|XP_002522169.1| RING finger protein 113A, putative [Ricinus communis]
           gi|223538607|gb|EEF40210.1| RING finger protein 113A,
           putative [Ricinus communis]
          Length = 325

 Score = 79.3 bits (194), Expect = 3e-13
 Identities = 32/33 (96%), Positives = 32/33 (96%)
 Frame = -3

Query: 288 HYFCEHCALKHHAKNKKCFVCNTPTLGIFNTAH 190
           HYFCEHCALKHHAKNKKCFVCN PTLGIFNTAH
Sbjct: 282 HYFCEHCALKHHAKNKKCFVCNQPTLGIFNTAH 314


>ref|XP_003525380.1| PREDICTED: zinc finger CCCH domain-containing protein 1-like
           [Glycine max]
          Length = 329

 Score = 77.4 bits (189), Expect = 1e-12
 Identities = 31/33 (93%), Positives = 31/33 (93%)
 Frame = -3

Query: 288 HYFCEHCALKHHAKNKKCFVCNTPTLGIFNTAH 190
           HYFCEHCALKHHAKNKKCFVCN PTLGIFN AH
Sbjct: 286 HYFCEHCALKHHAKNKKCFVCNQPTLGIFNVAH 318


>ref|XP_002320858.1| predicted protein [Populus trichocarpa] gi|222861631|gb|EEE99173.1|
           predicted protein [Populus trichocarpa]
          Length = 323

 Score = 77.4 bits (189), Expect = 1e-12
 Identities = 31/33 (93%), Positives = 31/33 (93%)
 Frame = -3

Query: 288 HYFCEHCALKHHAKNKKCFVCNTPTLGIFNTAH 190
           HYFCEHCALKHHAKNKKCFVCN PTLGIFN AH
Sbjct: 279 HYFCEHCALKHHAKNKKCFVCNEPTLGIFNAAH 311


>ref|XP_003625944.1| Zinc finger CCCH domain-containing protein [Medicago truncatula]
           gi|355500959|gb|AES82162.1| Zinc finger CCCH
           domain-containing protein [Medicago truncatula]
          Length = 387

 Score = 77.4 bits (189), Expect = 1e-12
 Identities = 31/33 (93%), Positives = 31/33 (93%)
 Frame = -3

Query: 288 HYFCEHCALKHHAKNKKCFVCNTPTLGIFNTAH 190
           HYFCEHCALKHHAKNKKCFVCN PTLGIFN AH
Sbjct: 345 HYFCEHCALKHHAKNKKCFVCNQPTLGIFNVAH 377


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