BLASTX nr result

ID: Bupleurum21_contig00028933 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00028933
         (927 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI40267.3| unnamed protein product [Vitis vinifera]              345   9e-93
ref|XP_002524923.1| LIM domain kinase, putative [Ricinus communi...   344   1e-92
ref|XP_002300237.1| predicted protein [Populus trichocarpa] gi|2...   341   1e-91
emb|CBI33770.3| unnamed protein product [Vitis vinifera]              339   6e-91
ref|XP_002278529.1| PREDICTED: probable LRR receptor-like serine...   337   2e-90

>emb|CBI40267.3| unnamed protein product [Vitis vinifera]
          Length = 715

 Score =  345 bits (885), Expect = 9e-93
 Identities = 184/306 (60%), Positives = 222/306 (72%), Gaps = 1/306 (0%)
 Frame = +1

Query: 13   TASEDMSGSESEDHRKLSGINAEEIKKYKMDKSLVIVDGETKLEAETLLKASAYILGSSG 192
            T +E  +GSE   HR     N +E+ K   + S+V VDGET+LE ETLLKASAYILG++G
Sbjct: 370  TETETETGSEG--HRDDG--NKKEMMK-NGEGSVVTVDGETQLELETLLKASAYILGTTG 424

Query: 193  GSIVYKAVLEDGVAFAVRRIGECGVERLKEFETQVKAIAKLRHPNLVKVRGFYWGEDEKL 372
             SIVYKAVLEDG A AVRRIGE  VE+ K+FE QV+ IAKLRHPNLV+VRGFYWG DEKL
Sbjct: 425  ASIVYKAVLEDGTALAVRRIGESRVEKFKDFENQVRLIAKLRHPNLVRVRGFYWGSDEKL 484

Query: 373  LIYDYISNGSLASAGHKRFGSLPSHLPFQTRLNIAKGVARGLAYIHDKKHVHSNIKPSNI 552
            +IYDY+SNGSLAS GH++ GS P H+P + R  IAKGVARGLAYIH+KKHVH N+KPSNI
Sbjct: 485  IIYDYVSNGSLASTGHRKMGSSPIHMPLELRFRIAKGVARGLAYIHEKKHVHGNLKPSNI 544

Query: 553  LLTTDMEPVISDLGLHWLISGKNKYKTDNSTRHFGSKRCMSSSEGPQDHPSCSSPYIEPN 732
            LLT +MEP+I+D GL   +SG   +K D S  HF  +R  +  + PQD+P+  +      
Sbjct: 545  LLTPEMEPIIADFGLDRFLSGDYTHKDDASGGHFSRQRSTTFHDHPQDYPTAGTS----- 599

Query: 733  GFIGCTSPYHAPESLKSLKPNSKWDVYSYGIVLLELLTGKVFSDRELSQWTGGLYDM-DK 909
               G  SPYH PE L +LKPN +WDVYS+GIVLLELLTG+VF DREL Q   G   M ++
Sbjct: 600  --AGILSPYHPPEWLGTLKPNPRWDVYSFGIVLLELLTGRVFLDRELGQLKAGGSGMEER 657

Query: 910  TRVLMM 927
             RVL M
Sbjct: 658  DRVLRM 663


>ref|XP_002524923.1| LIM domain kinase, putative [Ricinus communis]
            gi|223535758|gb|EEF37420.1| LIM domain kinase, putative
            [Ricinus communis]
          Length = 785

 Score =  344 bits (883), Expect = 1e-92
 Identities = 178/306 (58%), Positives = 224/306 (73%), Gaps = 1/306 (0%)
 Frame = +1

Query: 13   TASEDMSGSESEDHRKLSGINAEEIKKYKMDKSLVIVDGETKLEAETLLKASAYILGSSG 192
            T+S+D   +   DH K+   N E  ++     +LV VDGE +LE ETLLKASAYILG++G
Sbjct: 425  TSSDD---NNDNDHPKVQENNQEHREQSSKGGTLVTVDGEKELELETLLKASAYILGATG 481

Query: 193  GSIVYKAVLEDGVAFAVRRIGECGVERLKEFETQVKAIAKLRHPNLVKVRGFYWGEDEKL 372
             SI+YKAVLEDG + AVRRIGE  VER ++FETQV+ IAKL HPNLV++RGFYWG DEKL
Sbjct: 482  SSIMYKAVLEDGTSLAVRRIGENHVERFRDFETQVRVIAKLVHPNLVRIRGFYWGADEKL 541

Query: 373  LIYDYISNGSLASAGHKRFGSLPSHLPFQTRLNIAKGVARGLAYIHDKKHVHSNIKPSNI 552
            +IYD++ NGSLASA +++ GS P HLP++ RL IAKGVARGL+Y+HDKK VH N+KPSNI
Sbjct: 542  IIYDFVPNGSLASARYRKVGSSPCHLPWEARLKIAKGVARGLSYLHDKKQVHGNLKPSNI 601

Query: 553  LLTTDMEPVISDLGLHWLISGKNKYKTDNSTRHFGSKRCMSSSEGPQDHPSCSSPYIEPN 732
            LL +DMEP I D GL  L++G +  K   STR+FGSKR  +S +  Q+     SP   P+
Sbjct: 602  LLGSDMEPRIGDFGLERLVTGDSSSKAGGSTRNFGSKRSSASRDSFQEFSIGPSPSPSPS 661

Query: 733  -GFIGCTSPYHAPESLKSLKPNSKWDVYSYGIVLLELLTGKVFSDRELSQWTGGLYDMDK 909
               IG  SPYHAPESL+SLKPN KWDV+S+G++LLELLTGKV    EL Q + G+   DK
Sbjct: 662  PSLIGGLSPYHAPESLRSLKPNPKWDVFSFGVILLELLTGKVIVVDELGQGSNGITVDDK 721

Query: 910  TRVLMM 927
            +R + M
Sbjct: 722  SRAIRM 727


>ref|XP_002300237.1| predicted protein [Populus trichocarpa] gi|222847495|gb|EEE85042.1|
            predicted protein [Populus trichocarpa]
          Length = 757

 Score =  341 bits (875), Expect = 1e-91
 Identities = 179/305 (58%), Positives = 217/305 (71%)
 Frame = +1

Query: 13   TASEDMSGSESEDHRKLSGINAEEIKKYKMDKSLVIVDGETKLEAETLLKASAYILGSSG 192
            T S+D   +E  ++   S  N E+      D  LV++DGET+LE ETLLKASAY+LG+SG
Sbjct: 422  TTSDDDQDNEDTNNANCSESNQEK------DSKLVVLDGETELELETLLKASAYVLGTSG 475

Query: 193  GSIVYKAVLEDGVAFAVRRIGECGVERLKEFETQVKAIAKLRHPNLVKVRGFYWGEDEKL 372
             SIVYKAVL DG AFAVRRIGE GVER ++FE QV+ IAKL+HPNLVK+ GFYWG DEKL
Sbjct: 476  RSIVYKAVLGDGTAFAVRRIGESGVER-RDFENQVRLIAKLKHPNLVKICGFYWGGDEKL 534

Query: 373  LIYDYISNGSLASAGHKRFGSLPSHLPFQTRLNIAKGVARGLAYIHDKKHVHSNIKPSNI 552
            ++YDY+ NGSLA+AG+++ GS PSHLP + R  IAKGVARGLA+IH KKHVH +IKP+NI
Sbjct: 535  VVYDYVCNGSLATAGYRKPGSSPSHLPLEVRFKIAKGVARGLAFIHGKKHVHGSIKPNNI 594

Query: 553  LLTTDMEPVISDLGLHWLISGKNKYKTDNSTRHFGSKRCMSSSEGPQDHPSCSSPYIEPN 732
            LL  DMEP+ISD GL  L+ G N  K  +S+RHF S+                S Y   N
Sbjct: 595  LLNLDMEPIISDFGLDRLVLGNNSNKASSSSRHFSSQ----------------SHYAPSN 638

Query: 733  GFIGCTSPYHAPESLKSLKPNSKWDVYSYGIVLLELLTGKVFSDRELSQWTGGLYDMDKT 912
                 + PY APESLK+ KP+ KWDVYS+GIVLLELLTG+VFSD +LSQWT G    DK 
Sbjct: 639  SSAASSLPYQAPESLKNPKPSPKWDVYSFGIVLLELLTGRVFSDGDLSQWTAGSIMEDKN 698

Query: 913  RVLMM 927
            RVL +
Sbjct: 699  RVLRL 703


>emb|CBI33770.3| unnamed protein product [Vitis vinifera]
          Length = 552

 Score =  339 bits (869), Expect = 6e-91
 Identities = 175/296 (59%), Positives = 212/296 (71%)
 Frame = +1

Query: 40   ESEDHRKLSGINAEEIKKYKMDKSLVIVDGETKLEAETLLKASAYILGSSGGSIVYKAVL 219
            + ED  + +G + EE    +     V VDGE +LE ETLLKASAYILG++G SI+YKAVL
Sbjct: 207  DEEDSTETTGSDGEE----EQTMQTVTVDGEKELELETLLKASAYILGATGSSIMYKAVL 262

Query: 220  EDGVAFAVRRIGECGVERLKEFETQVKAIAKLRHPNLVKVRGFYWGEDEKLLIYDYISNG 399
            EDG   AVRRIGE GVER ++FE QVK IAKL HPNLV++RGFYWG DEKL+IYD++ NG
Sbjct: 263  EDGTTLAVRRIGESGVERFRDFENQVKVIAKLVHPNLVRIRGFYWGVDEKLVIYDFVPNG 322

Query: 400  SLASAGHKRFGSLPSHLPFQTRLNIAKGVARGLAYIHDKKHVHSNIKPSNILLTTDMEPV 579
            SLASA +++ GS P H+P++ RL +AKG ARGL Y+HDKKHVH N+KPSNILL  DMEP 
Sbjct: 323  SLASARYRKVGSSPCHMPWEVRLKVAKGAARGLTYLHDKKHVHGNLKPSNILLGIDMEPK 382

Query: 580  ISDLGLHWLISGKNKYKTDNSTRHFGSKRCMSSSEGPQDHPSCSSPYIEPNGFIGCTSPY 759
            I D GL  L+SG+  YK   S R+FGSKR  +S +  QD P   SP   P+      SPY
Sbjct: 383  IGDFGLERLVSGETSYKAGGSARNFGSKRSTASRDSFQDMPVGPSPSPSPSSL--GVSPY 440

Query: 760  HAPESLKSLKPNSKWDVYSYGIVLLELLTGKVFSDRELSQWTGGLYDMDKTRVLMM 927
            HAPESL+SLKPN KWDV+S+G++LLELLTGKV    +L     GL   DK RVL M
Sbjct: 441  HAPESLRSLKPNPKWDVFSFGVILLELLTGKVIVSDDLGL---GLASEDKGRVLRM 493


>ref|XP_002278529.1| PREDICTED: probable LRR receptor-like serine/threonine-protein kinase
            At4g37250-like [Vitis vinifera]
          Length = 781

 Score =  337 bits (864), Expect = 2e-90
 Identities = 171/273 (62%), Positives = 204/273 (74%)
 Frame = +1

Query: 109  SLVIVDGETKLEAETLLKASAYILGSSGGSIVYKAVLEDGVAFAVRRIGECGVERLKEFE 288
            +LV VDGE +LE ETLLKASAYILG++G SI+YKAVLEDG   AVRRIGE GVER ++FE
Sbjct: 455  ALVTVDGEKELELETLLKASAYILGATGSSIMYKAVLEDGTTLAVRRIGESGVERFRDFE 514

Query: 289  TQVKAIAKLRHPNLVKVRGFYWGEDEKLLIYDYISNGSLASAGHKRFGSLPSHLPFQTRL 468
             QVK IAKL HPNLV++RGFYWG DEKL+IYD++ NGSLASA +++ GS P H+P++ RL
Sbjct: 515  NQVKVIAKLVHPNLVRIRGFYWGVDEKLVIYDFVPNGSLASARYRKVGSSPCHMPWEVRL 574

Query: 469  NIAKGVARGLAYIHDKKHVHSNIKPSNILLTTDMEPVISDLGLHWLISGKNKYKTDNSTR 648
             +AKG ARGL Y+HDKKHVH N+KPSNILL  DMEP I D GL  L+SG+  YK   S R
Sbjct: 575  KVAKGAARGLTYLHDKKHVHGNLKPSNILLGIDMEPKIGDFGLERLVSGETSYKAGGSAR 634

Query: 649  HFGSKRCMSSSEGPQDHPSCSSPYIEPNGFIGCTSPYHAPESLKSLKPNSKWDVYSYGIV 828
            +FGSKR  +S +  QD P   SP   P+      SPYHAPESL+SLKPN KWDV+S+G++
Sbjct: 635  NFGSKRSTASRDSFQDMPVGPSPSPSPSSL--GVSPYHAPESLRSLKPNPKWDVFSFGVI 692

Query: 829  LLELLTGKVFSDRELSQWTGGLYDMDKTRVLMM 927
            LLELLTGKV    +L     GL   DK RVL M
Sbjct: 693  LLELLTGKVIVSDDLGL---GLASEDKGRVLRM 722


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