BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00028931
         (291 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002511392.1| pentatricopeptide repeat-containing protein,...   144   1e-32
ref|XP_002264386.1| PREDICTED: putative pentatricopeptide repeat...   143   1e-32
emb|CAN64813.1| hypothetical protein VITISV_024998 [Vitis vinifera]   143   1e-32
ref|XP_002892165.1| pentatricopeptide repeat-containing protein ...   141   5e-32
ref|XP_004139961.1| PREDICTED: putative pentatricopeptide repeat...   137   1e-30

>ref|XP_002511392.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223550507|gb|EEF51994.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 441

 Score =  144 bits (362), Expect = 1e-32
 Identities = 69/96 (71%), Positives = 79/96 (82%)
 Frame = -2

Query: 290 NDIDGHPHLKSGLVEAYGRCGCLDDACTVFQSLEERDVVAWSSLISAYAFHGDAKTALEM 111
           NDID HP L SGL++AYGRCGCL +A  VF  ++ERDVVAWSSLISAYA HG+AK ALE+
Sbjct: 226 NDIDRHPQLGSGLLDAYGRCGCLINASNVFCGMKERDVVAWSSLISAYALHGEAKNALEI 285

Query: 110 FAQMESAKVKPDEVAFLGVLKACSHAGLPDEAKMYF 3
           F QME AKV+PD++ FL VLKACSHAGL DEA  YF
Sbjct: 286 FRQMELAKVQPDDITFLAVLKACSHAGLADEALDYF 321



 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 26/79 (32%), Positives = 45/79 (56%)
 Frame = -2

Query: 275 HPHLKSGLVEAYGRCGCLDDACTVFQSLEERDVVAWSSLISAYAFHGDAKTALEMFAQME 96
           +P + S LV+ YG+C C+  A  +F  + +R+VV W+++IS Y      + AL+MF  ME
Sbjct: 97  NPFVASALVDMYGKCACIFSARKLFDEIPQRNVVVWNAMISLYTHSNRVRDALDMFDAME 156

Query: 95  SAKVKPDEVAFLGVLKACS 39
              ++P+   F  ++   S
Sbjct: 157 ---IEPNVSTFNALIYGLS 172


>ref|XP_002264386.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g03510 [Vitis vinifera] gi|298205226|emb|CBI17285.3|
           unnamed protein product [Vitis vinifera]
          Length = 430

 Score =  143 bits (361), Expect = 1e-32
 Identities = 72/98 (73%), Positives = 80/98 (81%), Gaps = 2/98 (2%)
 Frame = -2

Query: 290 NDIDGHPHLKSGLVEAYGRCGCLDDACTVFQSLE--ERDVVAWSSLISAYAFHGDAKTAL 117
           N ID HPHL+S LVEAYGRCGC+ ++  VFQS+   ERDVVAWSSLISAYA HGDA+TAL
Sbjct: 210 NGIDPHPHLRSCLVEAYGRCGCIVNSQCVFQSISMSERDVVAWSSLISAYALHGDARTAL 269

Query: 116 EMFAQMESAKVKPDEVAFLGVLKACSHAGLPDEAKMYF 3
           E F QME AKV+PD + FLGVLKACSHAGL DEA  YF
Sbjct: 270 ETFEQMEMAKVQPDGITFLGVLKACSHAGLADEALGYF 307


>emb|CAN64813.1| hypothetical protein VITISV_024998 [Vitis vinifera]
          Length = 513

 Score =  143 bits (361), Expect = 1e-32
 Identities = 72/98 (73%), Positives = 80/98 (81%), Gaps = 2/98 (2%)
 Frame = -2

Query: 290 NDIDGHPHLKSGLVEAYGRCGCLDDACTVFQSLE--ERDVVAWSSLISAYAFHGDAKTAL 117
           N ID HPHL+S LVEAYGRCGC+ ++  VFQS+   ERDVVAWSSLISAYA HGDA+TAL
Sbjct: 210 NGIDPHPHLRSCLVEAYGRCGCIVNSQCVFQSISMSERDVVAWSSLISAYALHGDARTAL 269

Query: 116 EMFAQMESAKVKPDEVAFLGVLKACSHAGLPDEAKMYF 3
           E F QME AKV+PD + FLGVLKACSHAGL DEA  YF
Sbjct: 270 ETFEQMEMAKVQPDGITFLGVLKACSHAGLADEALGYF 307


>ref|XP_002892165.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297338007|gb|EFH68424.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 429

 Score =  141 bits (356), Expect = 5e-32
 Identities = 68/96 (70%), Positives = 79/96 (82%)
 Frame = -2

Query: 290 NDIDGHPHLKSGLVEAYGRCGCLDDACTVFQSLEERDVVAWSSLISAYAFHGDAKTALEM 111
           N I+ HP LKSGLVEAYGRCGC+     VF+S+ +RDVVAWSSLISAYA HGDA++AL  
Sbjct: 211 NLIEPHPQLKSGLVEAYGRCGCIVYVQLVFESMTDRDVVAWSSLISAYALHGDAESALRT 270

Query: 110 FAQMESAKVKPDEVAFLGVLKACSHAGLPDEAKMYF 3
           F +MESAKV PD++AFL VLKACSHAGL DEA +YF
Sbjct: 271 FQEMESAKVTPDDIAFLNVLKACSHAGLADEALLYF 306


>ref|XP_004139961.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g03510-like [Cucumis sativus]
          Length = 391

 Score =  137 bits (344), Expect = 1e-30
 Identities = 66/96 (68%), Positives = 75/96 (78%)
 Frame = -2

Query: 290 NDIDGHPHLKSGLVEAYGRCGCLDDACTVFQSLEERDVVAWSSLISAYAFHGDAKTALEM 111
           NDI  H  L SGLVEAYGRCGCL  A  VF ++ ERDVVAWSSLISA+A HG+A TAL +
Sbjct: 173 NDIGAHLQLSSGLVEAYGRCGCLSYAHNVFDNMTERDVVAWSSLISAHALHGEASTALNI 232

Query: 110 FAQMESAKVKPDEVAFLGVLKACSHAGLPDEAKMYF 3
           F QMES KV+PDE+ F+GVLKACSH GL +EA  YF
Sbjct: 233 FQQMESCKVQPDEITFIGVLKACSHVGLANEALDYF 268