BLASTX nr result

ID: Bupleurum21_contig00028930 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00028930
         (627 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002530188.1| conserved hypothetical protein [Ricinus comm...   267   1e-69
ref|XP_003532461.1| PREDICTED: F-box/LRR-repeat protein At4g2942...   249   3e-64
ref|XP_004147091.1| PREDICTED: F-box/LRR-repeat protein At4g2942...   243   3e-62
ref|NP_194671.1| F-box/LRR-repeat protein [Arabidopsis thaliana]...   242   5e-62
dbj|BAC42265.1| unknown protein [Arabidopsis thaliana]                242   5e-62

>ref|XP_002530188.1| conserved hypothetical protein [Ricinus communis]
           gi|223530307|gb|EEF32202.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 460

 Score =  267 bits (683), Expect = 1e-69
 Identities = 138/213 (64%), Positives = 167/213 (78%), Gaps = 5/213 (2%)
 Frame = -2

Query: 626 LSRLNDSTQLARCRCVSKTLNTLS-RDVRSIYLHCSFDRYLKSRSPATMFQVTQFKTIFN 450
           L+RL DST+LARCR VSKT N L   D+RSI L C+  RYLKSRSP T  Q+T FK IFN
Sbjct: 13  LTRLTDSTELARCRLVSKTFNKLIFSDIRSINLTCTLSRYLKSRSPNTKDQITPFKRIFN 72

Query: 449 DLIDDLSEIGVDSVCIGVEKSMRGLLYEDVEDD--CDDLYLTESNFVREWLV--KVGEGL 282
            L++    + VDSV IGVEKS+ G+ Y+DVE+D   DDLYL+E  FV+EWL+  +V   L
Sbjct: 73  RLVNRSDSLVVDSVTIGVEKSLCGITYDDVEEDEWSDDLYLSEVEFVKEWLLLPRVCREL 132

Query: 281 KSISVSDFWVQACWRRSHVLPLFSSYCHNLLELEVKNTWLSVEGLNPMPMLTSLTLEYIR 102
           K +S+SDFW+QACWRRS +L L SS CH LLELEVKN+WLSV+GL PMP+LTSLTLE IR
Sbjct: 133 KFLSISDFWIQACWRRSQILALVSSCCHGLLELEVKNSWLSVDGLIPMPVLTSLTLESIR 192

Query: 101 LDDEDLNRLNECFPGLEVLNLIGVGGLIEPKIH 3
           LDDE+L+++N CFP L+VLNL+GVGGL EPKIH
Sbjct: 193 LDDENLSKVNHCFPCLKVLNLVGVGGLREPKIH 225


>ref|XP_003532461.1| PREDICTED: F-box/LRR-repeat protein At4g29420-like [Glycine max]
          Length = 453

 Score =  249 bits (636), Expect = 3e-64
 Identities = 123/208 (59%), Positives = 155/208 (74%)
 Frame = -2

Query: 626 LSRLNDSTQLARCRCVSKTLNTLSRDVRSIYLHCSFDRYLKSRSPATMFQVTQFKTIFND 447
           LSR  D+T +ARCR VSK+LN  S +VR + L CS  RYLKSRSP T   VT FKT+  +
Sbjct: 16  LSRFTDTTDVARCRVVSKSLNAASYEVRWLNLVCSMSRYLKSRSPETKHLVTPFKTVITN 75

Query: 446 LIDDLSEIGVDSVCIGVEKSMRGLLYEDVEDDCDDLYLTESNFVREWLVKVGEGLKSISV 267
           L+     +  +SV +GV++++ G+ ++DVED+ DDLYLT+ NF+REWL  V + LKS SV
Sbjct: 76  LVRRSGNL--ESVSLGVDRALGGVSFDDVEDEADDLYLTDMNFIREWLPSVSDALKSFSV 133

Query: 266 SDFWVQACWRRSHVLPLFSSYCHNLLELEVKNTWLSVEGLNPMPMLTSLTLEYIRLDDED 87
           SDFWVQ+CWRRS  L L SS C NL++L V+N WLSV+GL  MP LT LTLE++RLDDED
Sbjct: 134 SDFWVQSCWRRSEALSLISSTCRNLVKLVVRNAWLSVDGLCLMPTLTYLTLEFVRLDDED 193

Query: 86  LNRLNECFPGLEVLNLIGVGGLIEPKIH 3
           L+R+N CFP L  LNLIGVGGL EPKI+
Sbjct: 194 LSRINACFPNLTQLNLIGVGGLKEPKIN 221


>ref|XP_004147091.1| PREDICTED: F-box/LRR-repeat protein At4g29420-like [Cucumis
           sativus] gi|449503313|ref|XP_004161940.1| PREDICTED:
           F-box/LRR-repeat protein At4g29420-like [Cucumis
           sativus]
          Length = 449

 Score =  243 bits (619), Expect = 3e-62
 Identities = 125/209 (59%), Positives = 154/209 (73%), Gaps = 2/209 (0%)
 Frame = -2

Query: 626 LSRLNDSTQLARCRCVSKTLNTLSRDVRSIYLHCSFDRYLKSRSPATMFQVTQFKTIFND 447
           L+RL DS  LARCR  SK++N LSRDVRS+ L CS DRYLKSR+  T   VT FK I   
Sbjct: 13  LNRLADSADLARCRVASKSINVLSRDVRSVNLFCSLDRYLKSRAAETKLLVTPFKVILKT 72

Query: 446 LIDDLSEIGVDSVCIGVEKSMRGLLYE--DVEDDCDDLYLTESNFVREWLVKVGEGLKSI 273
           L+++   + +DSV IGVEKS+  + YE  DVED  DDL+LT+  + +EWL  +G+ L S+
Sbjct: 73  LVNEF--LALDSVSIGVEKSLGRISYEHDDVEDWSDDLFLTDVGYAKEWLPSIGKNLTSL 130

Query: 272 SVSDFWVQACWRRSHVLPLFSSYCHNLLELEVKNTWLSVEGLNPMPMLTSLTLEYIRLDD 93
           S+ DFWVQ+CWR+S +L L + YC NLLELE+KN WLSV+GL+ M  L  LTLE+IRLDD
Sbjct: 131 SIVDFWVQSCWRQSKILALITLYCCNLLELELKNAWLSVDGLHRMNSLKYLTLEFIRLDD 190

Query: 92  EDLNRLNECFPGLEVLNLIGVGGLIEPKI 6
           EDL+ LN  FP LEVLNLIGVGGL EPKI
Sbjct: 191 EDLSELNNNFPHLEVLNLIGVGGLNEPKI 219


>ref|NP_194671.1| F-box/LRR-repeat protein [Arabidopsis thaliana]
           gi|75264516|sp|Q9M0E1.1|FBL77_ARATH RecName:
           Full=F-box/LRR-repeat protein At4g29420
           gi|7269841|emb|CAB79700.1| hypothetical protein
           [Arabidopsis thaliana] gi|109946621|gb|ABG48489.1|
           At4g29420 [Arabidopsis thaliana]
           gi|332660229|gb|AEE85629.1| F-box/LRR-repeat protein
           [Arabidopsis thaliana]
          Length = 446

 Score =  242 bits (617), Expect = 5e-62
 Identities = 121/209 (57%), Positives = 162/209 (77%), Gaps = 1/209 (0%)
 Frame = -2

Query: 626 LSRLNDSTQLARCRCVSKTLNTLSRDVRSIYLHCSFDRYLKSRSPATMFQVTQFKTIFND 447
           LSR+NDS  LARCR  SKTLN+LSR+VR++ L C++ RYLKSRS   +  VT FKTIF  
Sbjct: 13  LSRINDSESLARCRVASKTLNSLSREVRAVNLICTWSRYLKSRS---IVVVTPFKTIFRS 69

Query: 446 LIDDLSEIGVDSVCIGVEKSMRGLLYEDV-EDDCDDLYLTESNFVREWLVKVGEGLKSIS 270
           LI++ S+I   S+ +GV+K+++G+ ++D  E+D  DLYLT+  FV+EWL +V E L+++S
Sbjct: 70  LIENSSKIR--SISVGVDKALKGMSFDDFNEEDSKDLYLTDVEFVKEWLPRVREDLENLS 127

Query: 269 VSDFWVQACWRRSHVLPLFSSYCHNLLELEVKNTWLSVEGLNPMPMLTSLTLEYIRLDDE 90
           +SDFW+Q+CWR+S +L L SS C  L++LEVKN WLSV GL  MP L  LTLE+IRLDDE
Sbjct: 128 ISDFWIQSCWRKSDILALISSNCSKLVKLEVKNAWLSVVGLTEMPNLRYLTLEFIRLDDE 187

Query: 89  DLNRLNECFPGLEVLNLIGVGGLIEPKIH 3
           +L ++N+CFP L+ LNLIGVGGL EP+IH
Sbjct: 188 NLEKVNDCFPFLQELNLIGVGGLKEPRIH 216


>dbj|BAC42265.1| unknown protein [Arabidopsis thaliana]
          Length = 446

 Score =  242 bits (617), Expect = 5e-62
 Identities = 121/209 (57%), Positives = 162/209 (77%), Gaps = 1/209 (0%)
 Frame = -2

Query: 626 LSRLNDSTQLARCRCVSKTLNTLSRDVRSIYLHCSFDRYLKSRSPATMFQVTQFKTIFND 447
           LSR+NDS  LARCR  SKTLN+LSR+VR++ L C++ RYLKSRS   +  VT FKTIF  
Sbjct: 13  LSRINDSESLARCRVASKTLNSLSREVRAVNLICTWSRYLKSRS---IVVVTPFKTIFRS 69

Query: 446 LIDDLSEIGVDSVCIGVEKSMRGLLYEDV-EDDCDDLYLTESNFVREWLVKVGEGLKSIS 270
           LI++ S+I   S+ +GV+K+++G+ ++D  E+D  DLYLT+  FV+EWL +V E L+++S
Sbjct: 70  LIENSSKIR--SISVGVDKALKGMSFDDFNEEDSKDLYLTDVEFVKEWLPRVREDLENLS 127

Query: 269 VSDFWVQACWRRSHVLPLFSSYCHNLLELEVKNTWLSVEGLNPMPMLTSLTLEYIRLDDE 90
           +SDFW+Q+CWR+S +L L SS C  L++LEVKN WLSV GL  MP L  LTLE+IRLDDE
Sbjct: 128 ISDFWIQSCWRKSDILALISSNCSKLVKLEVKNAWLSVVGLTEMPNLRYLTLEFIRLDDE 187

Query: 89  DLNRLNECFPGLEVLNLIGVGGLIEPKIH 3
           +L ++N+CFP L+ LNLIGVGGL EP+IH
Sbjct: 188 NLEKVNDCFPFLQELNLIGVGGLKEPRIH 216


Top