BLASTX nr result

ID: Bupleurum21_contig00028925 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00028925
         (503 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002509639.1| conserved hypothetical protein [Ricinus comm...    75   7e-12
ref|XP_002281385.1| PREDICTED: uncharacterized protein LOC100241...    73   3e-11
ref|XP_004166247.1| PREDICTED: uncharacterized LOC101211719 [Cuc...    64   1e-08
ref|XP_004133904.1| PREDICTED: uncharacterized protein LOC101211...    64   1e-08
ref|XP_002303541.1| predicted protein [Populus trichocarpa] gi|2...    64   1e-08

>ref|XP_002509639.1| conserved hypothetical protein [Ricinus communis]
           gi|223549538|gb|EEF51026.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 108

 Score = 74.7 bits (182), Expect = 7e-12
 Identities = 45/90 (50%), Positives = 55/90 (61%)
 Frame = +2

Query: 59  MCISSTKSTSSHNFHVLTKTARGSKRNKIQIYGLIRRXXXXXXXXXXXXXXNLKLYMENI 238
           MCI+  +      F+   K  R SK+ K+Q+ GL RR              NLKLY+EN 
Sbjct: 1   MCINRIEKFPPPPFYPAKKKQR-SKKPKVQVLGLTRRRCQEEEGKDMELK-NLKLYLENQ 58

Query: 239 IIFEENEKLRKKASLLHQENLYLLSEFQKR 328
            I EENEKLRKKA+LLHQENL L+SEFQK+
Sbjct: 59  SIVEENEKLRKKANLLHQENLALISEFQKK 88


>ref|XP_002281385.1| PREDICTED: uncharacterized protein LOC100241009 [Vitis vinifera]
           gi|297742657|emb|CBI34806.3| unnamed protein product
           [Vitis vinifera]
          Length = 99

 Score = 72.8 bits (177), Expect = 3e-11
 Identities = 42/86 (48%), Positives = 53/86 (61%)
 Frame = +2

Query: 128 SKRNKIQIYGLIRRXXXXXXXXXXXXXXNLKLYMENIIIFEENEKLRKKASLLHQENLYL 307
           +KR+K+Q++ L RR              NLKLY+EN  I EENEKLRKKA+LLHQENL L
Sbjct: 15  TKRSKVQVHRLTRRRRCEVQVEKDMELKNLKLYLENRNIMEENEKLRKKATLLHQENLAL 74

Query: 308 LSEFQKRLISKPDHISTTLSQLFRDQ 385
           +SEFQ +     +  STTL  +   Q
Sbjct: 75  MSEFQTK-FPHFNRFSTTLFLVLNKQ 99


>ref|XP_004166247.1| PREDICTED: uncharacterized LOC101211719 [Cucumis sativus]
          Length = 115

 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 39/88 (44%), Positives = 48/88 (54%), Gaps = 6/88 (6%)
 Frame = +2

Query: 122 RGSKRNKIQIYGLIRRXXXXXXXXXXXXXX------NLKLYMENIIIFEENEKLRKKASL 283
           R  +R  +++Y L+RR                    NLKLYMEN  I EENE+LRKKA L
Sbjct: 17  RQRRRRPVRVYSLLRRMRFAKEEANSAGVKVEMEIKNLKLYMENQSIIEENERLRKKAFL 76

Query: 284 LHQENLYLLSEFQKRLISKPDHISTTLS 367
           LH+EN  LLS+ Q     KP H S+ LS
Sbjct: 77  LHKENQVLLSQLQNFSHYKPPHSSSDLS 104


>ref|XP_004133904.1| PREDICTED: uncharacterized protein LOC101211719 [Cucumis sativus]
          Length = 115

 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 39/88 (44%), Positives = 48/88 (54%), Gaps = 6/88 (6%)
 Frame = +2

Query: 122 RGSKRNKIQIYGLIRRXXXXXXXXXXXXXX------NLKLYMENIIIFEENEKLRKKASL 283
           R  +R  +++Y L+RR                    NLKLYMEN  I EENE+LRKKA L
Sbjct: 17  RQRRRRPVRVYSLLRRMRFAKEEANSAGVKVEMEIKNLKLYMENQSIIEENERLRKKAFL 76

Query: 284 LHQENLYLLSEFQKRLISKPDHISTTLS 367
           LH+EN  LLS+ Q     KP H S+ LS
Sbjct: 77  LHKENQVLLSQLQNFSHYKPPHSSSDLS 104


>ref|XP_002303541.1| predicted protein [Populus trichocarpa] gi|222840973|gb|EEE78520.1|
           predicted protein [Populus trichocarpa]
          Length = 60

 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 36/56 (64%), Positives = 40/56 (71%)
 Frame = +2

Query: 212 NLKLYMENIIIFEENEKLRKKASLLHQENLYLLSEFQKRLISKPDHISTTLSQLFR 379
           NLKLY+EN  I EENEKLRKKASLLHQENL L+SE QK+     D  S TL  L +
Sbjct: 5   NLKLYLENQSIVEENEKLRKKASLLHQENLALMSELQKK-FPHLDRFSNTLLLLHK 59


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