BLASTX nr result

ID: Bupleurum21_contig00028915 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00028915
         (950 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002297620.1| predicted protein [Populus trichocarpa] gi|2...    81   4e-13
ref|XP_002303987.1| predicted protein [Populus trichocarpa] gi|2...    78   3e-12
gb|AFK47464.1| unknown [Medicago truncatula]                           78   4e-12
ref|XP_003629931.1| hypothetical protein MTR_8g088460 [Medicago ...    78   4e-12
gb|AFK48162.1| unknown [Medicago truncatula]                           76   1e-11

>ref|XP_002297620.1| predicted protein [Populus trichocarpa] gi|222844878|gb|EEE82425.1|
           predicted protein [Populus trichocarpa]
          Length = 110

 Score = 80.9 bits (198), Expect = 4e-13
 Identities = 40/74 (54%), Positives = 52/74 (70%), Gaps = 2/74 (2%)
 Frame = -3

Query: 891 MVFNSKLVVKVAKTSADVWQYMACL--PETIHNQHLLDLVLCFPLQQFGRLALAFWSFFC 718
           MVFNS +V+ VA  SADVWQ +AC+   + + +  LLDLV CFPLQQ GRLAL  W+F C
Sbjct: 1   MVFNSLIVLSVAHVSADVWQQIACIRFQDRVSSHQLLDLVCCFPLQQLGRLALFVWTFLC 60

Query: 717 VPTSPNSYYLYHSY 676
           +P  P+S+   +SY
Sbjct: 61  LP-PPDSFLSSYSY 73


>ref|XP_002303987.1| predicted protein [Populus trichocarpa] gi|222841419|gb|EEE78966.1|
           predicted protein [Populus trichocarpa]
          Length = 113

 Score = 78.2 bits (191), Expect = 3e-12
 Identities = 38/76 (50%), Positives = 52/76 (68%), Gaps = 2/76 (2%)
 Frame = -3

Query: 891 MVFNSKLVVKVAKTSADVWQYMAC--LPETIHNQHLLDLVLCFPLQQFGRLALAFWSFFC 718
           MVFNS +V+ VA  SADVWQ +AC  L + + +  LLDLV CFPLQQ GR +L  W+F C
Sbjct: 1   MVFNSLIVLSVAHKSADVWQQIACMGLQDQVSSHQLLDLVCCFPLQQLGRFSLYIWTFLC 60

Query: 717 VPTSPNSYYLYHSYSN 670
           +P  P+S+   ++Y +
Sbjct: 61  LP-PPDSFLSSYTYQS 75


>gb|AFK47464.1| unknown [Medicago truncatula]
          Length = 106

 Score = 77.8 bits (190), Expect = 4e-12
 Identities = 34/67 (50%), Positives = 49/67 (73%)
 Frame = -3

Query: 891 MVFNSKLVVKVAKTSADVWQYMACLPETIHNQHLLDLVLCFPLQQFGRLALAFWSFFCVP 712
           MV N+++VV+VA+ SA  WQ+++C+ + I++  LLDL+ CFPL Q GRL L   SFFC+P
Sbjct: 1   MVLNTQVVVRVARVSAQTWQWLSCIHDPINSDQLLDLLFCFPLHQLGRLTLCLCSFFCLP 60

Query: 711 TSPNSYY 691
             P S+Y
Sbjct: 61  -QPYSFY 66


>ref|XP_003629931.1| hypothetical protein MTR_8g088460 [Medicago truncatula]
           gi|355523953|gb|AET04407.1| hypothetical protein
           MTR_8g088460 [Medicago truncatula]
          Length = 120

 Score = 77.8 bits (190), Expect = 4e-12
 Identities = 34/67 (50%), Positives = 49/67 (73%)
 Frame = -3

Query: 891 MVFNSKLVVKVAKTSADVWQYMACLPETIHNQHLLDLVLCFPLQQFGRLALAFWSFFCVP 712
           MV N+++VV+VA+ SA  WQ+++C+ + I++  LLDL+ CFPL Q GRL L   SFFC+P
Sbjct: 1   MVLNTQVVVRVARVSAQTWQWLSCIHDPINSDQLLDLLFCFPLHQLGRLTLCLCSFFCLP 60

Query: 711 TSPNSYY 691
             P S+Y
Sbjct: 61  -QPYSFY 66


>gb|AFK48162.1| unknown [Medicago truncatula]
          Length = 106

 Score = 76.3 bits (186), Expect = 1e-11
 Identities = 33/67 (49%), Positives = 48/67 (71%)
 Frame = -3

Query: 891 MVFNSKLVVKVAKTSADVWQYMACLPETIHNQHLLDLVLCFPLQQFGRLALAFWSFFCVP 712
           MV N+++VV+VA+ S   WQ+++C+ + I++  LLDL+ CFPL Q GRL L   SFFC+P
Sbjct: 1   MVLNTQVVVRVARVSVQTWQWLSCIHDPINSDQLLDLLFCFPLHQLGRLTLCLCSFFCLP 60

Query: 711 TSPNSYY 691
             P S+Y
Sbjct: 61  -QPYSFY 66


Top