BLASTX nr result

ID: Bupleurum21_contig00028907 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00028907
         (347 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN71438.1| hypothetical protein VITISV_011330 [Vitis vinifera]   157   1e-36
gb|ABN08841.1| RNA-directed DNA polymerase (Reverse transcriptas...   152   4e-35
gb|EEC84982.1| hypothetical protein OsI_32248 [Oryza sativa Indi...   148   5e-34
gb|EAZ08016.1| hypothetical protein OsI_30282 [Oryza sativa Indi...   147   9e-34
gb|EEE59033.1| hypothetical protein OsJ_10782 [Oryza sativa Japo...   146   2e-33

>emb|CAN71438.1| hypothetical protein VITISV_011330 [Vitis vinifera]
          Length = 1484

 Score =  157 bits (396), Expect = 1e-36
 Identities = 73/113 (64%), Positives = 92/113 (81%)
 Frame = +3

Query: 9   LISENQSAFVPNRSITDNVVVAFEIIHHMRRKTGGQEGEVALKLDISKAYDRVDWRYLRH 188
           LI+E+QS FVP ++IT+NVVVAFE+IH+M+RKT G+ G+VALK+DISKAYDR+ W YL+ 
Sbjct: 153 LINESQSTFVPAKAITBNVVVAFELIHYMKRKTHGKVGDVALKIDISKAYDRIRWDYLKA 212

Query: 189 RMHSLGFCNKWINWIMRCVTTVSYDVCVNGSVVGPIIPKRGLRQGDPLSPYLF 347
            M  +GF +KW+ WI+ CV+ VSY V VNG +VGP  P R LRQGDPLSPYLF
Sbjct: 213 IMLRMGFDSKWMEWIILCVSIVSYSVSVNGELVGPFYPGRELRQGDPLSPYLF 265


>gb|ABN08841.1| RNA-directed DNA polymerase (Reverse transcriptase) [Medicago
           truncatula]
          Length = 462

 Score =  152 bits (383), Expect = 4e-35
 Identities = 70/108 (64%), Positives = 85/108 (78%)
 Frame = +3

Query: 24  QSAFVPNRSITDNVVVAFEIIHHMRRKTGGQEGEVALKLDISKAYDRVDWRYLRHRMHSL 203
           +SAFVP RSI DN +VA EI+H+M+ K  G+  +VALKLDISKAYDR+DW YLR  M  +
Sbjct: 199 KSAFVPERSILDNAMVAIEIVHYMKAKAKGKSEDVALKLDISKAYDRLDWDYLRDIMTQM 258

Query: 204 GFCNKWINWIMRCVTTVSYDVCVNGSVVGPIIPKRGLRQGDPLSPYLF 347
           GF ++W++WIM CV TV Y V VNG+ VGPI+P R LRQGDPLSPYLF
Sbjct: 259 GFSSRWVSWIMLCVETVDYSVLVNGASVGPIVPGRDLRQGDPLSPYLF 306


>gb|EEC84982.1| hypothetical protein OsI_32248 [Oryza sativa Indica Group]
           gi|222630794|gb|EEE62926.1| hypothetical protein
           OsJ_17731 [Oryza sativa Japonica Group]
          Length = 893

 Score =  148 bits (373), Expect = 5e-34
 Identities = 70/115 (60%), Positives = 86/115 (74%)
 Frame = +3

Query: 3   PTLISENQSAFVPNRSITDNVVVAFEIIHHMRRKTGGQEGEVALKLDISKAYDRVDWRYL 182
           P +IS NQSAFVP R ITDNV++A+E+ H M+ K  G+EG  ALKLD+SKAYDRV+W +L
Sbjct: 205 PDIISPNQSAFVPQRLITDNVLLAYEMTHFMQTKRTGREGYAALKLDMSKAYDRVEWSFL 264

Query: 183 RHRMHSLGFCNKWINWIMRCVTTVSYDVCVNGSVVGPIIPKRGLRQGDPLSPYLF 347
              M  LGF   W+  IMRCV+TV+Y + VNG +   IIP RGLRQGDP+SPYLF
Sbjct: 265 EKMMVRLGFAEGWVKLIMRCVSTVTYRIKVNGDLTDQIIPSRGLRQGDPISPYLF 319


>gb|EAZ08016.1| hypothetical protein OsI_30282 [Oryza sativa Indica Group]
          Length = 632

 Score =  147 bits (371), Expect = 9e-34
 Identities = 70/115 (60%), Positives = 87/115 (75%)
 Frame = +3

Query: 3   PTLISENQSAFVPNRSITDNVVVAFEIIHHMRRKTGGQEGEVALKLDISKAYDRVDWRYL 182
           P +IS NQSAFVP R ITDNV++A+E+ H ++ K  G +   ALKLD+SKAYDRV+W +L
Sbjct: 91  PEIISLNQSAFVPGRMITDNVLLAYELTHFLQNKRRGSDKFAALKLDMSKAYDRVEWEFL 150

Query: 183 RHRMHSLGFCNKWINWIMRCVTTVSYDVCVNGSVVGPIIPKRGLRQGDPLSPYLF 347
           R  M  LGFC +WIN +M  V+TVSY + VNG +   IIP+RGLRQGDPLSPYLF
Sbjct: 151 RRMMGKLGFCQEWINIVMGFVSTVSYRIKVNGDLTEQIIPQRGLRQGDPLSPYLF 205


>gb|EEE59033.1| hypothetical protein OsJ_10782 [Oryza sativa Japonica Group]
          Length = 850

 Score =  146 bits (369), Expect = 2e-33
 Identities = 64/113 (56%), Positives = 84/113 (74%)
 Frame = +3

Query: 9   LISENQSAFVPNRSITDNVVVAFEIIHHMRRKTGGQEGEVALKLDISKAYDRVDWRYLRH 188
           +IS  QSAF+P R ITDN ++AFE IHH++++T   +   A KLD++KAYDRVDW +LR 
Sbjct: 255 IISVTQSAFIPERLITDNALIAFECIHHIQKETSAGKQFCAYKLDLAKAYDRVDWDFLRG 314

Query: 189 RMHSLGFCNKWINWIMRCVTTVSYDVCVNGSVVGPIIPKRGLRQGDPLSPYLF 347
            +  +GFC+ W+ W+M CVTTV Y V  NG+++ P  P RGLRQGDPLSPYLF
Sbjct: 315 ALTKVGFCSTWVEWVMACVTTVKYSVSFNGNLLEPFSPSRGLRQGDPLSPYLF 367


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