BLASTX nr result

ID: Bupleurum21_contig00028849 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00028849
         (483 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI20740.3| unnamed protein product [Vitis vinifera]              139   2e-43
ref|XP_002280293.2| PREDICTED: endoribonuclease Dicer homolog 3a...   139   2e-43
ref|XP_004158269.1| PREDICTED: LOW QUALITY PROTEIN: endoribonucl...   139   1e-42
ref|XP_004144277.1| PREDICTED: endoribonuclease Dicer homolog 3a...   139   1e-42
ref|XP_003603236.1| Endoribonuclease Dicer-like protein [Medicag...   130   3e-39

>emb|CBI20740.3| unnamed protein product [Vitis vinifera]
          Length = 1688

 Score =  139 bits (350), Expect(2) = 2e-43
 Identities = 68/92 (73%), Positives = 79/92 (85%)
 Frame = +1

Query: 1    HASDDQEANRGYC**RLEFLGDSVLDLLITWHLYQSHKDIDPGELTDLRSASVNNENFAE 180
            HA++ QE   GYC  RLEFLGDSVLD+LITWHLYQSH+DIDPGELTDLRSASVNNE+FA+
Sbjct: 1289 HATE-QELGVGYCYQRLEFLGDSVLDVLITWHLYQSHRDIDPGELTDLRSASVNNESFAQ 1347

Query: 181  AAIRRDLHLHLQHCSGLLSSQITEFARYVSHS 276
             A+RR+L  HLQHCSGLL  QI E+A+Y+S S
Sbjct: 1348 VAVRRNLQQHLQHCSGLLLGQIKEYAKYLSGS 1379



 Score = 61.6 bits (148), Expect(2) = 2e-43
 Identities = 29/33 (87%), Positives = 33/33 (100%)
 Frame = +2

Query: 383  QALGDLVESIAGAILIDSKLNLDEVWRIFKPIL 481
            +ALGDLVESIAGAILID+KLNL+EVWRIFKP+L
Sbjct: 1393 KALGDLVESIAGAILIDTKLNLNEVWRIFKPLL 1425


>ref|XP_002280293.2| PREDICTED: endoribonuclease Dicer homolog 3a-like [Vitis vinifera]
          Length = 1648

 Score =  139 bits (350), Expect(2) = 2e-43
 Identities = 68/92 (73%), Positives = 79/92 (85%)
 Frame = +1

Query: 1    HASDDQEANRGYC**RLEFLGDSVLDLLITWHLYQSHKDIDPGELTDLRSASVNNENFAE 180
            HA++ QE   GYC  RLEFLGDSVLD+LITWHLYQSH+DIDPGELTDLRSASVNNE+FA+
Sbjct: 1279 HATE-QELGVGYCYQRLEFLGDSVLDVLITWHLYQSHRDIDPGELTDLRSASVNNESFAQ 1337

Query: 181  AAIRRDLHLHLQHCSGLLSSQITEFARYVSHS 276
             A+RR+L  HLQHCSGLL  QI E+A+Y+S S
Sbjct: 1338 VAVRRNLQQHLQHCSGLLLGQIKEYAKYLSGS 1369



 Score = 61.6 bits (148), Expect(2) = 2e-43
 Identities = 29/33 (87%), Positives = 33/33 (100%)
 Frame = +2

Query: 383  QALGDLVESIAGAILIDSKLNLDEVWRIFKPIL 481
            +ALGDLVESIAGAILID+KLNL+EVWRIFKP+L
Sbjct: 1383 KALGDLVESIAGAILIDTKLNLNEVWRIFKPLL 1415


>ref|XP_004158269.1| PREDICTED: LOW QUALITY PROTEIN: endoribonuclease Dicer homolog
            3a-like [Cucumis sativus]
          Length = 1639

 Score =  139 bits (351), Expect(2) = 1e-42
 Identities = 66/93 (70%), Positives = 77/93 (82%)
 Frame = +1

Query: 7    SDDQEANRGYC**RLEFLGDSVLDLLITWHLYQSHKDIDPGELTDLRSASVNNENFAEAA 186
            + DQE    YC  RLEFLGDSVLDLLITWH YQ++ DIDPGELTDLRSASVNNENFA+ A
Sbjct: 1276 TSDQEIGVNYCYQRLEFLGDSVLDLLITWHYYQNYSDIDPGELTDLRSASVNNENFAQVA 1335

Query: 187  IRRDLHLHLQHCSGLLSSQITEFARYVSHSRSS 285
            +RR+L  HLQHCSGLL SQITE+ +Y+S S+ +
Sbjct: 1336 VRRNLQQHLQHCSGLLMSQITEYVKYLSESQDT 1368



 Score = 58.9 bits (141), Expect(2) = 1e-42
 Identities = 26/33 (78%), Positives = 32/33 (96%)
 Frame = +2

Query: 383  QALGDLVESIAGAILIDSKLNLDEVWRIFKPIL 481
            + LGD+VESIAGAILID+KLNLDEVW+I+KP+L
Sbjct: 1379 KVLGDMVESIAGAILIDTKLNLDEVWKIYKPLL 1411


>ref|XP_004144277.1| PREDICTED: endoribonuclease Dicer homolog 3a-like [Cucumis sativus]
          Length = 1359

 Score =  139 bits (351), Expect(2) = 1e-42
 Identities = 66/93 (70%), Positives = 77/93 (82%)
 Frame = +1

Query: 7    SDDQEANRGYC**RLEFLGDSVLDLLITWHLYQSHKDIDPGELTDLRSASVNNENFAEAA 186
            + DQE    YC  RLEFLGDSVLDLLITWH YQ++ DIDPGELTDLRSASVNNENFA+ A
Sbjct: 1006 TSDQEIGVNYCYQRLEFLGDSVLDLLITWHYYQNYSDIDPGELTDLRSASVNNENFAQVA 1065

Query: 187  IRRDLHLHLQHCSGLLSSQITEFARYVSHSRSS 285
            +RR+L  HLQHCSGLL SQITE+ +Y+S S+ +
Sbjct: 1066 VRRNLQQHLQHCSGLLMSQITEYVKYLSESQDT 1098



 Score = 58.9 bits (141), Expect(2) = 1e-42
 Identities = 26/33 (78%), Positives = 32/33 (96%)
 Frame = +2

Query: 383  QALGDLVESIAGAILIDSKLNLDEVWRIFKPIL 481
            + LGD+VESIAGAILID+KLNLDEVW+I+KP+L
Sbjct: 1109 KVLGDMVESIAGAILIDTKLNLDEVWKIYKPLL 1141


>ref|XP_003603236.1| Endoribonuclease Dicer-like protein [Medicago truncatula]
            gi|355492284|gb|AES73487.1| Endoribonuclease Dicer-like
            protein [Medicago truncatula]
          Length = 1758

 Score =  130 bits (326), Expect(2) = 3e-39
 Identities = 63/86 (73%), Positives = 72/86 (83%)
 Frame = +1

Query: 13   DQEANRGYC**RLEFLGDSVLDLLITWHLYQSHKDIDPGELTDLRSASVNNENFAEAAIR 192
            + E   G C  RLEFLGDSVLDLLITWHL+QSH +IDPGELTDLRSASVNNENFA+AA+R
Sbjct: 1347 ESEHGTGCCYERLEFLGDSVLDLLITWHLFQSHTEIDPGELTDLRSASVNNENFAQAAVR 1406

Query: 193  RDLHLHLQHCSGLLSSQITEFARYVS 270
            R+LH HL H SGLL SQI E+A+ +S
Sbjct: 1407 RNLHQHLLHSSGLLQSQILEYAKVIS 1432



 Score = 57.0 bits (136), Expect(2) = 3e-39
 Identities = 25/33 (75%), Positives = 32/33 (96%)
 Frame = +2

Query: 383  QALGDLVESIAGAILIDSKLNLDEVWRIFKPIL 481
            +ALGDLVESIAGAILID+KL+LD+VW++F P+L
Sbjct: 1448 KALGDLVESIAGAILIDTKLDLDQVWKVFNPLL 1480