BLASTX nr result

ID: Bupleurum21_contig00028846 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00028846
         (530 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002518741.1| conserved hypothetical protein [Ricinus comm...   133   2e-29
ref|XP_002298728.1| predicted protein [Populus trichocarpa] gi|2...   126   2e-27
ref|XP_004140806.1| PREDICTED: uncharacterized protein LOC101203...   125   4e-27
ref|XP_003607953.1| hypothetical protein MTR_4g085850 [Medicago ...   111   6e-23
gb|ADE76236.1| unknown [Picea sitchensis]                              55   6e-06

>ref|XP_002518741.1| conserved hypothetical protein [Ricinus communis]
           gi|223542122|gb|EEF43666.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 445

 Score =  133 bits (334), Expect = 2e-29
 Identities = 70/141 (49%), Positives = 94/141 (66%), Gaps = 8/141 (5%)
 Frame = -2

Query: 400 NPNSIPNQFLHLNHFLSSADIAATAAVFSRKRKRXXXXXXXXXXXETQ------PTYRVD 239
           N N   N F  ++H LSS + AA+ ++ +  +KR            T       P +R+ 
Sbjct: 39  NSNCYANLFPLIHHLLSSQETAASLSILNLSKKRKRTHFSEPDSESTHEDKSHGPFHRLS 98

Query: 238 --SPIPTNPDSFKQFFKMKASTFEWLSTLLEPLLECRDPVDSPINLSAEIRLGVGLYRLA 65
             + +  NPDSF+ FFKMKASTFEWLS LLEPLL+CRDP+ SP++LSAE+RLGVGL+RLA
Sbjct: 99  ELARVVQNPDSFRTFFKMKASTFEWLSGLLEPLLDCRDPIGSPLSLSAELRLGVGLFRLA 158

Query: 64  TGSDYPEISTRFGVSQPVSRF 2
           TGS+Y EI+ RFGV++  +RF
Sbjct: 159 TGSNYSEIADRFGVTESAARF 179


>ref|XP_002298728.1| predicted protein [Populus trichocarpa] gi|222845986|gb|EEE83533.1|
           predicted protein [Populus trichocarpa]
          Length = 433

 Score =  126 bits (316), Expect = 2e-27
 Identities = 75/176 (42%), Positives = 105/176 (59%), Gaps = 15/176 (8%)
 Frame = -2

Query: 484 MDSRALAXXXXXXXXXXXXXXXXIFPPQNPNSIPNQFLH--LNHFLSSADIAATAAVF-- 317
           M+S+ LA                +FP  + NS  +  L   + H+LS  ++A + ++F  
Sbjct: 1   MESKKLAALLSSLVSELLVLVLLLFPSDSYNSNSHGILFRIIRHYLSCQELATSLSLFPI 60

Query: 316 SRKRKRXXXXXXXXXXXETQPTYRVD-----------SPIPTNPDSFKQFFKMKASTFEW 170
           S+KRKR            ++PT+              S +  NPDSFK  F+M++STFEW
Sbjct: 61  SKKRKRTQLREAG-----SEPTHEDRDLERGSRLGELSRVAPNPDSFKTTFRMRSSTFEW 115

Query: 169 LSTLLEPLLECRDPVDSPINLSAEIRLGVGLYRLATGSDYPEISTRFGVSQPVSRF 2
           LS LLEPLLECRDP+ +PINLS+E+RLG+GL+RLATGS Y EI+ RFGV++ V+RF
Sbjct: 116 LSGLLEPLLECRDPIGTPINLSSELRLGIGLFRLATGSSYIEIAGRFGVTESVTRF 171


>ref|XP_004140806.1| PREDICTED: uncharacterized protein LOC101203312 [Cucumis sativus]
           gi|449501700|ref|XP_004161442.1| PREDICTED:
           uncharacterized LOC101203312 [Cucumis sativus]
          Length = 386

 Score =  125 bits (314), Expect = 4e-27
 Identities = 80/170 (47%), Positives = 94/170 (55%), Gaps = 9/170 (5%)
 Frame = -2

Query: 484 MDSRALAXXXXXXXXXXXXXXXXIFPPQNP-----NSIPNQFLHLN---HFLSSADIAAT 329
           MDS  LA                +FP  NP     NS P+   + N   HFL S D AA+
Sbjct: 1   MDSPRLAALLSSLISQLLLLLFLLFPSSNPHSLFSNSAPDSSFYANLFAHFLFSQDFAAS 60

Query: 328 AAVFSRKRKRXXXXXXXXXXXETQPTYRVDSPIPTN-PDSFKQFFKMKASTFEWLSTLLE 152
               S  RKR            +    RV     T  PDSF+  F+M +STFEWLS LLE
Sbjct: 61  LPFLSVSRKRKRTNRSDHLELGSSHG-RVHHLFRTRTPDSFRNHFRMTSSTFEWLSGLLE 119

Query: 151 PLLECRDPVDSPINLSAEIRLGVGLYRLATGSDYPEISTRFGVSQPVSRF 2
           PLLECRDPV SP++LS EIRLGVGLYRLATG D+  IS +FGVS+ V+RF
Sbjct: 120 PLLECRDPVGSPLDLSVEIRLGVGLYRLATGCDFSTISDQFGVSESVARF 169


>ref|XP_003607953.1| hypothetical protein MTR_4g085850 [Medicago truncatula]
           gi|355509008|gb|AES90150.1| hypothetical protein
           MTR_4g085850 [Medicago truncatula]
          Length = 399

 Score =  111 bits (278), Expect = 6e-23
 Identities = 72/168 (42%), Positives = 92/168 (54%), Gaps = 7/168 (4%)
 Frame = -2

Query: 484 MDSRALAXXXXXXXXXXXXXXXXIFPPQN--PNSIP----NQFLHLNHFLSSADIAATAA 323
           M+SR LA                IFPP +  PNS+P      F  ++HFL S   A T  
Sbjct: 1   MESRKLAALLSSLVSQLLLILLLIFPPNSFPPNSLPPNSTETFSLIHHFLFSQQTAVTTT 60

Query: 322 VFSRKRKRXXXXXXXXXXXETQPTYRVDSPIPTNPDSFKQFFKMKASTFEWLSTLLEPLL 143
           + SRKRKR                      IP NPD F   F M +STFEWL+ LLEPLL
Sbjct: 61  LLSRKRKRYHHRL-----------------IP-NPDWFPTTFLMTSSTFEWLTNLLEPLL 102

Query: 142 ECRDPVD-SPINLSAEIRLGVGLYRLATGSDYPEISTRFGVSQPVSRF 2
           ECRDP    P+NL+A +RLG+GL+RLA+GSDY +I+ +F V+  V++F
Sbjct: 103 ECRDPAYLLPLNLTAGVRLGIGLFRLASGSDYQQIANQFNVTVSVAKF 150


>gb|ADE76236.1| unknown [Picea sitchensis]
          Length = 368

 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 30/70 (42%), Positives = 41/70 (58%)
 Frame = -2

Query: 214 SFKQFFKMKASTFEWLSTLLEPLLECRDPVDSPINLSAEIRLGVGLYRLATGSDYPEIST 35
           SFK  F+M  +TFEWL    EPL      V    ++    R+G+GL+RLATGS Y  +S 
Sbjct: 31  SFKANFRMSPTTFEWLCKQFEPL------VTKTNDVGVFERVGMGLFRLATGSTYQAVSQ 84

Query: 34  RFGVSQPVSR 5
           RF  ++P +R
Sbjct: 85  RFVSTEPTAR 94


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