BLASTX nr result

ID: Bupleurum21_contig00028837 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00028837
         (390 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI27434.3| unnamed protein product [Vitis vinifera]               61   8e-08
ref|XP_002329248.1| predicted protein [Populus trichocarpa] gi|2...    60   2e-07

>emb|CBI27434.3| unnamed protein product [Vitis vinifera]
          Length = 452

 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 46/131 (35%), Positives = 75/131 (57%), Gaps = 2/131 (1%)
 Frame = +3

Query: 3   FLEPVAANSL--KLTTSIENLVHLTLLKIEFCNLHQIQYVLCLIQSSPILQDLYIEVDPG 176
           FLE +A  ++  +L     NL  L L +++F NL +I   LCLI SSP L++L +    G
Sbjct: 302 FLEFLALGNVPKRLPILFNNLKVLHLDEMDFSNLDEILCSLCLITSSPNLEELRVVAYAG 361

Query: 177 EDMWNEAMVEQYLLLPDLSRILAGQLETVRIEGMKGSKAELQFVKLLLASTPLLRWMKLE 356
            D+  +A+VE Y    +LS     +L+ V++E +   + EL+F+K +LAS+P L  M++ 
Sbjct: 362 -DIARDAVVE-YFGTQNLSHHSLKRLQKVKMEEISNFEPELEFIKFILASSPSLEEMEVL 419

Query: 357 HTLDDPKEELR 389
            + D   E+ R
Sbjct: 420 RSEDTVGEDER 430


>ref|XP_002329248.1| predicted protein [Populus trichocarpa] gi|222870702|gb|EEF07833.1|
           predicted protein [Populus trichocarpa]
          Length = 429

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 39/119 (32%), Positives = 67/119 (56%), Gaps = 2/119 (1%)
 Frame = +3

Query: 3   FLEPVAANSL--KLTTSIENLVHLTLLKIEFCNLHQIQYVLCLIQSSPILQDLYIEVDPG 176
           FLE +A   +  +L T   +L+ L L +I F +L  I   + +++SSP L+DL + V P 
Sbjct: 283 FLEFLANKDVPERLPTPFNSLLALELKEIRFASLKGIAASISILRSSPNLEDLLVTVYPC 342

Query: 177 EDMWNEAMVEQYLLLPDLSRILAGQLETVRIEGMKGSKAELQFVKLLLASTPLLRWMKL 353
           +D+ N  M    +     S     QL+ V+I G+ G++ E +F++L+LA +P+L  M +
Sbjct: 343 DDISNPVM--DLVTAQLQSDFYFNQLKVVKIRGINGTRIEWEFLRLILAHSPVLESMTI 399


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