BLASTX nr result

ID: Bupleurum21_contig00028824 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00028824
         (658 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002513593.1| mitochondrial carrier protein, putative [Ric...   177   2e-42
ref|NP_567790.1| manganese tracking factor for mitochondrial SOD...   170   2e-40
ref|XP_004145920.1| PREDICTED: solute carrier family 25 member 3...   166   4e-39
ref|XP_002869530.1| mitochondrial substrate carrier family prote...   166   5e-39
ref|XP_004160368.1| PREDICTED: solute carrier family 25 member 3...   165   8e-39

>ref|XP_002513593.1| mitochondrial carrier protein, putative [Ricinus communis]
           gi|223547501|gb|EEF48996.1| mitochondrial carrier
           protein, putative [Ricinus communis]
          Length = 416

 Score =  177 bits (449), Expect = 2e-42
 Identities = 94/167 (56%), Positives = 113/167 (67%)
 Frame = -3

Query: 503 VVDSKGMQNPWIESDVEKSSGVKFDGQCVSLISDSMLVGQGTESASMPLCKLSTDKSTSG 324
           +VD++  QNPW+    E S   + +G  + L+S+S+++  G E          ++ S   
Sbjct: 1   MVDTERTQNPWVSITEEASKVEEINGHDL-LMSESVVI-DGKEPGIYAHEPHQSNNSKPD 58

Query: 323 GNLGLTERXXXXXXXXXXXXXIVNPLDLAKTRLQAQAAGVQYSHPLSNLTSRMAFFGPNM 144
             LG  ER             +VNPLD+AKTRLQAQAAGV YSHPLSN+ SRMA+FGPNM
Sbjct: 59  WKLGFGERAFSAAGAAFLSAILVNPLDVAKTRLQAQAAGVPYSHPLSNIVSRMAYFGPNM 118

Query: 143 MFADLRCSTSCTRAGVHGTVSICPPDCFQYKGTLDVLYKIIRQEGLS 3
           MFADLRCS SC RAGVHGTVSICPPDCFQYKGTLDV YKIIRQEG +
Sbjct: 119 MFADLRCSPSCARAGVHGTVSICPPDCFQYKGTLDVFYKIIRQEGFA 165


>ref|NP_567790.1| manganese tracking factor for mitochondrial SOD2 [Arabidopsis
           thaliana] gi|16226567|gb|AAL16202.1|AF428433_1
           AT4g27940/T13J8_50 [Arabidopsis thaliana]
           gi|21553497|gb|AAM62590.1| unknown [Arabidopsis
           thaliana] gi|21928061|gb|AAM78059.1| AT4g27940/T13J8_50
           [Arabidopsis thaliana] gi|332660011|gb|AEE85411.1|
           manganese tracking factor for mitochondrial SOD2
           [Arabidopsis thaliana]
          Length = 413

 Score =  170 bits (430), Expect = 2e-40
 Identities = 92/166 (55%), Positives = 103/166 (62%)
 Frame = -3

Query: 503 VVDSKGMQNPWIESDVEKSSGVKFDGQCVSLISDSMLVGQGTESASMPLCKLSTDKSTSG 324
           +V+++  +N WI S+   SS           I+D M    G   AS P      DK  S 
Sbjct: 1   MVEAERAENSWIASETSPSSSPVVIESSDFSITDGMRDVSGFGIASRP----QLDKGLSE 56

Query: 323 GNLGLTERXXXXXXXXXXXXXIVNPLDLAKTRLQAQAAGVQYSHPLSNLTSRMAFFGPNM 144
            N+G TER              +NPLD+ KTRLQAQAAG+ YSHPLSN   RMAFFGPNM
Sbjct: 57  NNIGFTERVFSAAGAAVLSAVTLNPLDVVKTRLQAQAAGMSYSHPLSNSIGRMAFFGPNM 116

Query: 143 MFADLRCSTSCTRAGVHGTVSICPPDCFQYKGTLDVLYKIIRQEGL 6
           MFADLRCS SC RAGV GTVSICPPDCFQYKGT DV  KIIRQEGL
Sbjct: 117 MFADLRCSPSCARAGVEGTVSICPPDCFQYKGTFDVFTKIIRQEGL 162


>ref|XP_004145920.1| PREDICTED: solute carrier family 25 member 39-like [Cucumis
           sativus]
          Length = 421

 Score =  166 bits (420), Expect = 4e-39
 Identities = 95/159 (59%), Positives = 108/159 (67%), Gaps = 2/159 (1%)
 Frame = -3

Query: 473 WIESDVE--KSSGVKFDGQCVSLISDSMLVGQGTESASMPLCKLSTDKSTSGGNLGLTER 300
           WI SD E  +   V  D   + ++SD +   + + S S P    S D +T+   LGL ER
Sbjct: 18  WIGSDEEARRIERVGRDSSMLVVVSDEV---RFSASQSQP----SNDTATNE-KLGLGER 69

Query: 299 XXXXXXXXXXXXXIVNPLDLAKTRLQAQAAGVQYSHPLSNLTSRMAFFGPNMMFADLRCS 120
                        IVNPLD+AKTRLQAQAAGV YSHPLS+ TSRMAFFGPN MFADLRCS
Sbjct: 70  AFSAAGAAFLSAVIVNPLDVAKTRLQAQAAGVPYSHPLSDWTSRMAFFGPNTMFADLRCS 129

Query: 119 TSCTRAGVHGTVSICPPDCFQYKGTLDVLYKIIRQEGLS 3
            SC RAGVHGTV+ICPPDCFQYKGTLDV YKIIRQEG +
Sbjct: 130 PSCARAGVHGTVAICPPDCFQYKGTLDVFYKIIRQEGFA 168


>ref|XP_002869530.1| mitochondrial substrate carrier family protein [Arabidopsis lyrata
           subsp. lyrata] gi|297315366|gb|EFH45789.1| mitochondrial
           substrate carrier family protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 417

 Score =  166 bits (419), Expect = 5e-39
 Identities = 90/168 (53%), Positives = 108/168 (64%), Gaps = 1/168 (0%)
 Frame = -3

Query: 503 VVDSKGMQNPWIESDVEKSSG-VKFDGQCVSLISDSMLVGQGTESASMPLCKLSTDKSTS 327
           +V+++  +N WI S++  SS     + +  S+I DS   G    S      +   +K  S
Sbjct: 1   MVEAERAENSWIASEMSSSSSPAAIESRDFSII-DSTNGGIRDVSGFGIASRPQLEKGLS 59

Query: 326 GGNLGLTERXXXXXXXXXXXXXIVNPLDLAKTRLQAQAAGVQYSHPLSNLTSRMAFFGPN 147
             N+G TER              +NPLD+ KTRLQAQAAG+ YSHPLSN   RMAFFGPN
Sbjct: 60  ENNIGFTERVFSAAGAAVLSAVTLNPLDVVKTRLQAQAAGMSYSHPLSNSIGRMAFFGPN 119

Query: 146 MMFADLRCSTSCTRAGVHGTVSICPPDCFQYKGTLDVLYKIIRQEGLS 3
           MMFADLRCS SC+RAGV GTVSICPPDCFQYKGT DV  KIIRQEGL+
Sbjct: 120 MMFADLRCSPSCSRAGVQGTVSICPPDCFQYKGTFDVFTKIIRQEGLA 167


>ref|XP_004160368.1| PREDICTED: solute carrier family 25 member 39-like [Cucumis
           sativus]
          Length = 421

 Score =  165 bits (417), Expect = 8e-39
 Identities = 93/159 (58%), Positives = 107/159 (67%), Gaps = 2/159 (1%)
 Frame = -3

Query: 473 WIESDVE--KSSGVKFDGQCVSLISDSMLVGQGTESASMPLCKLSTDKSTSGGNLGLTER 300
           WI SD E  +   V  D   + ++SD +   + + S S P    +T++      LGL ER
Sbjct: 18  WIGSDEEARRIERVGRDSSMLVVVSDEV---RFSASQSQPSNVTATNEK-----LGLGER 69

Query: 299 XXXXXXXXXXXXXIVNPLDLAKTRLQAQAAGVQYSHPLSNLTSRMAFFGPNMMFADLRCS 120
                        IVNPLD+AKTRLQAQAAGV YSHPLS+ TSRMAFFGPN MFADLRCS
Sbjct: 70  AFSAAGAAFLSAVIVNPLDVAKTRLQAQAAGVPYSHPLSDWTSRMAFFGPNTMFADLRCS 129

Query: 119 TSCTRAGVHGTVSICPPDCFQYKGTLDVLYKIIRQEGLS 3
            SC RAGVHGTV+ICPPDCFQYKGTLDV YKIIRQEG +
Sbjct: 130 PSCARAGVHGTVAICPPDCFQYKGTLDVFYKIIRQEGFA 168


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