BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00028820
         (339 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002510452.1| pentatricopeptide repeat-containing protein,...    89   5e-16
ref|XP_002280968.2| PREDICTED: pentatricopeptide repeat-containi...    82   3e-14
ref|XP_004168675.1| PREDICTED: pentatricopeptide repeat-containi...    67   2e-09
ref|XP_004152769.1| PREDICTED: pentatricopeptide repeat-containi...    67   2e-09
ref|XP_003544296.1| PREDICTED: pentatricopeptide repeat-containi...    66   3e-09

>ref|XP_002510452.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223551153|gb|EEF52639.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 1218

 Score = 88.6 bits (218), Expect = 5e-16
 Identities = 46/99 (46%), Positives = 61/99 (61%), Gaps = 5/99 (5%)
 Frame = -2

Query: 287 IVPIKWTPPNSIPTKHYILCQFSSKPNKIAT-----FTDAHLNNLCTNGRLSEAIATLNS 123
           I+PI    P SIP +   L  FS+KP K +       TD+HLN LC  GRL+EA++ L  
Sbjct: 5   IMPIIKKSPISIPNEQDTLSAFSTKPTKSSVPFTKKITDSHLNYLCKKGRLNEAVSALEL 64

Query: 122 FSQAGLKVKPQTFTRLINSCIDSKSIDLGRKLHENLHLL 6
            +Q G KV P+TF  L+ SCID  S+ LGRK+H + HL+
Sbjct: 65  IAQHGSKVSPKTFISLLQSCIDCNSVTLGRKVHAHFHLV 103


>ref|XP_002280968.2| PREDICTED: pentatricopeptide repeat-containing protein
           At1g19720-like [Vitis vinifera]
          Length = 1545

 Score = 82.4 bits (202), Expect = 3e-14
 Identities = 46/110 (41%), Positives = 62/110 (56%), Gaps = 16/110 (14%)
 Frame = -2

Query: 287 IVPIKWTPPNSIPTKHYILCQFSSK----------------PNKIATFTDAHLNNLCTNG 156
           I+P K  PP + P+K     + SS+                P      TDAHLN+LC NG
Sbjct: 5   ILPCKSRPPLATPSKQGTSFECSSRIIQPRVSFTKIHQPLTPKLKPKVTDAHLNHLCKNG 64

Query: 155 RLSEAIATLNSFSQAGLKVKPQTFTRLINSCIDSKSIDLGRKLHENLHLL 6
           RL++AIA L++ +Q G  VKP T+ +L+ SCID  S +LGRKLH  + LL
Sbjct: 65  RLADAIACLDAIAQGGSNVKPNTYMQLLQSCIDQGSAELGRKLHARIGLL 114


>ref|XP_004168675.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g19720-like, partial [Cucumis sativus]
          Length = 1090

 Score = 66.6 bits (161), Expect = 2e-09
 Identities = 40/104 (38%), Positives = 57/104 (54%), Gaps = 11/104 (10%)
 Frame = -2

Query: 284 VPIKWTPPNSIPTKHYIL--CQFSSKPNKIATF---------TDAHLNNLCTNGRLSEAI 138
           +P +  PP S P         +FSSKP K + F          D HL+ LC+NG L EAI
Sbjct: 6   IPCQTNPPISGPASVIKPRPLKFSSKPIKTSIFFTYKLTSKFNDDHLSYLCSNGLLREAI 65

Query: 137 ATLNSFSQAGLKVKPQTFTRLINSCIDSKSIDLGRKLHENLHLL 6
             ++S S+ G K+   T+  L+ +CID  SI+LGR+LH  + L+
Sbjct: 66  TAIDSISKRGSKLSTNTYINLLQTCIDVGSIELGRELHVRMGLV 109


>ref|XP_004152769.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g19720-like [Cucumis sativus]
          Length = 1463

 Score = 66.6 bits (161), Expect = 2e-09
 Identities = 40/104 (38%), Positives = 57/104 (54%), Gaps = 11/104 (10%)
 Frame = -2

Query: 284 VPIKWTPPNSIPTKHYIL--CQFSSKPNKIATF---------TDAHLNNLCTNGRLSEAI 138
           +P +  PP S P         +FSSKP K + F          D HL+ LC+NG L EAI
Sbjct: 6   IPCQTNPPISGPASVIKPRPLKFSSKPIKTSIFFTYKLTSKFNDDHLSYLCSNGLLREAI 65

Query: 137 ATLNSFSQAGLKVKPQTFTRLINSCIDSKSIDLGRKLHENLHLL 6
             ++S S+ G K+   T+  L+ +CID  SI+LGR+LH  + L+
Sbjct: 66  TAIDSISKRGSKLSTNTYINLLQTCIDVGSIELGRELHVRMGLV 109


>ref|XP_003544296.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g19720-like [Glycine max]
          Length = 945

 Score = 65.9 bits (159), Expect = 3e-09
 Identities = 31/61 (50%), Positives = 41/61 (67%)
 Frame = -2

Query: 188 DAHLNNLCTNGRLSEAIATLNSFSQAGLKVKPQTFTRLINSCIDSKSIDLGRKLHENLHL 9
           D  LN LC NG LSEA+A L+S +Q G KV+P TF  L+ +CID   I +GR+LH  + L
Sbjct: 53  DTQLNQLCANGSLSEAVAILDSLAQQGSKVRPITFMNLLQACIDKDCILVGRELHTRIGL 112

Query: 8   L 6
           +
Sbjct: 113 V 113