BLASTX nr result
ID: Bupleurum21_contig00028806
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Bupleurum21_contig00028806
(387 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002280093.1| PREDICTED: protein Brevis radix-like 4-like ... 189 2e-46
ref|XP_004141066.1| PREDICTED: protein Brevis radix-like 4-like ... 186 1e-45
ref|XP_002309199.1| predicted protein [Populus trichocarpa] gi|2... 185 3e-45
ref|XP_002276168.1| PREDICTED: protein Brevis radix-like 2 isofo... 180 9e-44
emb|CAN69466.1| hypothetical protein VITISV_042553 [Vitis vinifera] 179 2e-43
>ref|XP_002280093.1| PREDICTED: protein Brevis radix-like 4-like [Vitis vinifera]
Length = 371
Score = 189 bits (480), Expect = 2e-46
Identities = 91/101 (90%), Positives = 98/101 (97%)
Frame = +2
Query: 2 GLTATPKLSSISGTKTETSSMDASIRTSSSREADRSGELSISNASDLENEWVEQDEPGVY 181
GLT+TPKLSSISG KTETSSMDASIRTSSSREADRSGELS+SNASDLE EWVE+DEPGVY
Sbjct: 268 GLTSTPKLSSISGAKTETSSMDASIRTSSSREADRSGELSVSNASDLETEWVEEDEPGVY 327
Query: 182 ITIRALPGGARELRRVRFSRDKFGEMHARLWWEENRSRIHK 304
ITIRALPGG RELRRVRFSR++FGEMHARLWWEENR+RIH+
Sbjct: 328 ITIRALPGGTRELRRVRFSRERFGEMHARLWWEENRARIHE 368
Score = 65.1 bits (157), Expect = 6e-09
Identities = 41/97 (42%), Positives = 52/97 (53%), Gaps = 6/97 (6%)
Frame = +2
Query: 26 SSISGTKTETSSMDASIRTSSSRE---ADRSGELSISNASDLENE---WVEQDEPGVYIT 187
SS S T M+A ++ SS E A SG S ENE WV Q EPGV IT
Sbjct: 91 SSSSTTPRWGKEMEARLKGLSSGEGTPASASGRRVESVVFVEENEPKEWVAQVEPGVLIT 150
Query: 188 IRALPGGARELRRVRFSRDKFGEMHARLWWEENRSRI 298
+LP G +L+R+RFSR+ F + A+ WW EN R+
Sbjct: 151 FVSLPRGGNDLKRIRFSREMFNKWQAQRWWAENYDRV 187
>ref|XP_004141066.1| PREDICTED: protein Brevis radix-like 4-like [Cucumis sativus]
gi|449488067|ref|XP_004157931.1| PREDICTED: protein
Brevis radix-like 4-like [Cucumis sativus]
Length = 371
Score = 186 bits (473), Expect = 1e-45
Identities = 90/101 (89%), Positives = 99/101 (98%)
Frame = +2
Query: 2 GLTATPKLSSISGTKTETSSMDASIRTSSSREADRSGELSISNASDLENEWVEQDEPGVY 181
GLT+TPKLSSISG KTETSS+DAS+R+SSSR+ADRSGELSISNASDLE+EWVEQDEPGVY
Sbjct: 268 GLTSTPKLSSISGAKTETSSIDASMRSSSSRDADRSGELSISNASDLESEWVEQDEPGVY 327
Query: 182 ITIRALPGGARELRRVRFSRDKFGEMHARLWWEENRSRIHK 304
ITIRALPGG RELRRVRFSR+KFGEMHARLWWEENR+RIH+
Sbjct: 328 ITIRALPGGKRELRRVRFSREKFGEMHARLWWEENRARIHE 368
Score = 67.8 bits (164), Expect = 9e-10
Identities = 40/104 (38%), Positives = 55/104 (52%), Gaps = 8/104 (7%)
Frame = +2
Query: 11 ATPKLSSISGTKTET--SSMDASIRTSSSRE------ADRSGELSISNASDLENEWVEQD 166
A + S+S TKT T M+A ++ SS E + R + + EWV Q
Sbjct: 85 AYKRSGSLSSTKTRTWGKEMEARLKGISSGEGTPNSLSGRRVDPVVYVEESEPKEWVAQV 144
Query: 167 EPGVYITIRALPGGARELRRVRFSRDKFGEMHARLWWEENRSRI 298
EPGV IT +LP G +L+R+RFSRD F + A+ WW EN R+
Sbjct: 145 EPGVLITFVSLPRGGNDLKRIRFSRDVFNKWQAQRWWAENYDRV 188
>ref|XP_002309199.1| predicted protein [Populus trichocarpa] gi|222855175|gb|EEE92722.1|
predicted protein [Populus trichocarpa]
Length = 377
Score = 185 bits (470), Expect = 3e-45
Identities = 89/101 (88%), Positives = 97/101 (96%)
Frame = +2
Query: 2 GLTATPKLSSISGTKTETSSMDASIRTSSSREADRSGELSISNASDLENEWVEQDEPGVY 181
G T+TPKLSSISG KTETSSMDASIR+SSSREADRSGELSISNASD+E EWVEQDEPGVY
Sbjct: 274 GFTSTPKLSSISGAKTETSSMDASIRSSSSREADRSGELSISNASDMETEWVEQDEPGVY 333
Query: 182 ITIRALPGGARELRRVRFSRDKFGEMHARLWWEENRSRIHK 304
ITIRALPGG RELRRVRFSR++FGEMHAR+WWEENR+RIH+
Sbjct: 334 ITIRALPGGKRELRRVRFSRERFGEMHARVWWEENRARIHE 374
Score = 63.5 bits (153), Expect = 2e-08
Identities = 28/50 (56%), Positives = 34/50 (68%)
Frame = +2
Query: 149 EWVEQDEPGVYITIRALPGGARELRRVRFSRDKFGEMHARLWWEENRSRI 298
EWV Q EPGV IT +LP G +L+R+RFSRD F + A+ WW EN RI
Sbjct: 144 EWVAQVEPGVLITFVSLPRGGNDLKRIRFSRDMFNKWQAQRWWAENYDRI 193
>ref|XP_002276168.1| PREDICTED: protein Brevis radix-like 2 isoform 2 [Vitis vinifera]
gi|297743026|emb|CBI35893.3| unnamed protein product
[Vitis vinifera]
Length = 371
Score = 180 bits (457), Expect = 9e-44
Identities = 87/101 (86%), Positives = 95/101 (94%)
Frame = +2
Query: 2 GLTATPKLSSISGTKTETSSMDASIRTSSSREADRSGELSISNASDLENEWVEQDEPGVY 181
GL +TPKLSSISG KTETSS+DAS+RTSSSREADRSGELSISNASD+E EWVEQDEPGVY
Sbjct: 268 GLASTPKLSSISGAKTETSSIDASVRTSSSREADRSGELSISNASDMETEWVEQDEPGVY 327
Query: 182 ITIRALPGGARELRRVRFSRDKFGEMHARLWWEENRSRIHK 304
ITIRALP G RELRRVRFSR++FGEMHARLWWEENR+RI +
Sbjct: 328 ITIRALPDGTRELRRVRFSRERFGEMHARLWWEENRARIQE 368
Score = 62.0 bits (149), Expect = 5e-08
Identities = 32/97 (32%), Positives = 49/97 (50%)
Frame = +2
Query: 8 TATPKLSSISGTKTETSSMDASIRTSSSREADRSGELSISNASDLENEWVEQDEPGVYIT 187
++TP+L G + E S S + E + D EW+ Q EPGV IT
Sbjct: 95 SSTPRLL---GKEMEARSKRLSSGEGTPASVSGRAESVVFMEEDEPKEWIAQVEPGVLIT 151
Query: 188 IRALPGGARELRRVRFSRDKFGEMHARLWWEENRSRI 298
++P G +L+R+RFSR+ F + A+ WW EN ++
Sbjct: 152 FVSMPQGGNDLKRIRFSREIFNKWQAQRWWAENYDKV 188
>emb|CAN69466.1| hypothetical protein VITISV_042553 [Vitis vinifera]
Length = 363
Score = 179 bits (454), Expect = 2e-43
Identities = 86/101 (85%), Positives = 95/101 (94%)
Frame = +2
Query: 2 GLTATPKLSSISGTKTETSSMDASIRTSSSREADRSGELSISNASDLENEWVEQDEPGVY 181
GL +TPKLSSISG KT+TSS+DAS+RTSSSREADRSGELSISNASD+E EWVEQDEPGVY
Sbjct: 260 GLASTPKLSSISGAKTDTSSIDASVRTSSSREADRSGELSISNASDMETEWVEQDEPGVY 319
Query: 182 ITIRALPGGARELRRVRFSRDKFGEMHARLWWEENRSRIHK 304
ITIRALP G RELRRVRFSR++FGEMHARLWWEENR+RI +
Sbjct: 320 ITIRALPDGTRELRRVRFSRERFGEMHARLWWEENRARIQE 360
Score = 62.0 bits (149), Expect = 5e-08
Identities = 32/97 (32%), Positives = 49/97 (50%)
Frame = +2
Query: 8 TATPKLSSISGTKTETSSMDASIRTSSSREADRSGELSISNASDLENEWVEQDEPGVYIT 187
++TP+L G + E S S + E + D EW+ Q EPGV IT
Sbjct: 95 SSTPRLL---GKEMEARSKRLSSGEGTPASVSGRAESVVFMEEDEPKEWIAQVEPGVLIT 151
Query: 188 IRALPGGARELRRVRFSRDKFGEMHARLWWEENRSRI 298
++P G +L+R+RFSR+ F + A+ WW EN ++
Sbjct: 152 FVSMPQGGNDLKRIRFSREIFNKWQAQRWWAENYDKV 188