BLASTX nr result

ID: Bupleurum21_contig00028800 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00028800
         (304 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002301544.1| predicted protein [Populus trichocarpa] gi|2...    90   2e-16
ref|XP_002333208.1| predicted protein [Populus trichocarpa] gi|2...    82   3e-14
ref|XP_002519312.1| ATP-binding cassette transporter, putative [...    82   5e-14
ref|XP_002334346.1| predicted protein [Populus trichocarpa] gi|2...    80   2e-13
ref|XP_002314994.1| predicted protein [Populus trichocarpa] gi|2...    80   2e-13

>ref|XP_002301544.1| predicted protein [Populus trichocarpa] gi|222843270|gb|EEE80817.1|
            predicted protein [Populus trichocarpa]
          Length = 1368

 Score = 89.7 bits (221), Expect = 2e-16
 Identities = 42/58 (72%), Positives = 47/58 (81%)
 Frame = -3

Query: 272  NDEQDLLNILGSMFIFLQFLGTYNCTSVLSIIATERNIVYRERFAGMYSAWIYSFAQV 99
            N EQD  NILGS+FIFLQF G  NC+SV+  +ATER IVYRERFAGMYS+W YS AQV
Sbjct: 1139 NGEQDFFNILGSIFIFLQFAGIANCSSVMPFVATERTIVYRERFAGMYSSWAYSSAQV 1196


>ref|XP_002333208.1| predicted protein [Populus trichocarpa] gi|222835114|gb|EEE73549.1|
            predicted protein [Populus trichocarpa]
          Length = 1406

 Score = 82.4 bits (202), Expect = 3e-14
 Identities = 36/57 (63%), Positives = 45/57 (78%)
 Frame = -3

Query: 269  DEQDLLNILGSMFIFLQFLGTYNCTSVLSIIATERNIVYRERFAGMYSAWIYSFAQV 99
            +EQDL NI+GSM+  + F G  NC+SVL  + TER ++YRERFAGMYS+W YSFAQV
Sbjct: 1178 NEQDLFNIVGSMYALIVFFGINNCSSVLPFVTTERTVLYRERFAGMYSSWAYSFAQV 1234


>ref|XP_002519312.1| ATP-binding cassette transporter, putative [Ricinus communis]
           gi|223541627|gb|EEF43176.1| ATP-binding cassette
           transporter, putative [Ricinus communis]
          Length = 275

 Score = 82.0 bits (201), Expect = 5e-14
 Identities = 37/56 (66%), Positives = 47/56 (83%)
 Frame = -3

Query: 266 EQDLLNILGSMFIFLQFLGTYNCTSVLSIIATERNIVYRERFAGMYSAWIYSFAQV 99
           EQDL+NILGS +I + FLG  NC++VL  +ATER ++YRE+FAG+YSAW YSFAQV
Sbjct: 214 EQDLINILGSTYIAVIFLGINNCSTVLPYVATERTVLYREKFAGVYSAWAYSFAQV 269


>ref|XP_002334346.1| predicted protein [Populus trichocarpa] gi|222871385|gb|EEF08516.1|
           predicted protein [Populus trichocarpa]
          Length = 381

 Score = 80.1 bits (196), Expect = 2e-13
 Identities = 36/58 (62%), Positives = 46/58 (79%)
 Frame = -3

Query: 272 NDEQDLLNILGSMFIFLQFLGTYNCTSVLSIIATERNIVYRERFAGMYSAWIYSFAQV 99
           N+EQDL+NILGSM+I + FLG  NC++V+  +ATER + YRE+FA MYS W YS AQV
Sbjct: 152 NNEQDLINILGSMYIAVIFLGINNCSTVVPYVATERTVFYREKFAAMYSPWAYSLAQV 209


>ref|XP_002314994.1| predicted protein [Populus trichocarpa] gi|222864034|gb|EEF01165.1|
            predicted protein [Populus trichocarpa]
          Length = 1362

 Score = 80.1 bits (196), Expect = 2e-13
 Identities = 36/58 (62%), Positives = 46/58 (79%)
 Frame = -3

Query: 272  NDEQDLLNILGSMFIFLQFLGTYNCTSVLSIIATERNIVYRERFAGMYSAWIYSFAQV 99
            N+EQDL+NILGSM+I + FLG  NC++V+  +ATER + YRE+FA MYS W YS AQV
Sbjct: 1133 NNEQDLINILGSMYIAVIFLGINNCSTVVPYVATERTVFYREKFAAMYSPWAYSLAQV 1190


Top