BLASTX nr result

ID: Bupleurum21_contig00028748 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00028748
         (490 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002320784.1| predicted protein [Populus trichocarpa] gi|2...    86   4e-15
ref|XP_002882035.1| hypothetical protein ARALYDRAFT_483720 [Arab...    84   9e-15
gb|AAA57124.1| DNA-binding protein [Arabidopsis thaliana]              84   1e-14
ref|NP_182106.1| Remorin [Arabidopsis thaliana] gi|75099946|sp|O...    84   1e-14
ref|XP_002511833.1| Remorin, putative [Ricinus communis] gi|2235...    81   8e-14

>ref|XP_002320784.1| predicted protein [Populus trichocarpa] gi|222861557|gb|EEE99099.1|
           predicted protein [Populus trichocarpa]
          Length = 193

 Score = 85.5 bits (210), Expect = 4e-15
 Identities = 49/99 (49%), Positives = 63/99 (63%), Gaps = 10/99 (10%)
 Frame = -1

Query: 268 MATEQPHKVEIESPAVQAPAPEKVDSVPKVEEDKTVLPP----------ANEPKALAVTE 119
           MA ++  KVE E+P   AP   K D    V ++K ++PP          A+E KALAV E
Sbjct: 1   MAEQEVKKVETETPVTPAPVETKSD----VADEKAIVPPPPAAEEKEKVADELKALAVVE 56

Query: 118 KTPVSEEKTTGGSQDRDVALAGLEKEKRLSVLKAWEESE 2
           KT  + +K +GGS DRD+ALA LEKEKRLS +KAWE+SE
Sbjct: 57  KTEPAPKKISGGSIDRDIALADLEKEKRLSFIKAWEDSE 95


>ref|XP_002882035.1| hypothetical protein ARALYDRAFT_483720 [Arabidopsis lyrata subsp.
           lyrata] gi|297327874|gb|EFH58294.1| hypothetical protein
           ARALYDRAFT_483720 [Arabidopsis lyrata subsp. lyrata]
          Length = 190

 Score = 84.3 bits (207), Expect = 9e-15
 Identities = 51/93 (54%), Positives = 62/93 (66%), Gaps = 4/93 (4%)
 Frame = -1

Query: 268 MATEQP-HKVEIESPAVQAPAPEKVDSVPKVEEDKTVLPPANEPKALAVTEKTPVSE--- 101
           MA EQ   K ++ESPAV APA E   +  +V ++K   PP  E KALAV EK P+ E   
Sbjct: 1   MAEEQKTSKADVESPAVLAPATEPTPAPVEVADEKIHNPPPVESKALAVVEK-PIEEHTP 59

Query: 100 EKTTGGSQDRDVALAGLEKEKRLSVLKAWEESE 2
           +KT+ GS DRDV LA LEKEK+ S +KAWEESE
Sbjct: 60  KKTSSGSADRDVILADLEKEKKTSFIKAWEESE 92


>gb|AAA57124.1| DNA-binding protein [Arabidopsis thaliana]
          Length = 190

 Score = 84.0 bits (206), Expect = 1e-14
 Identities = 51/93 (54%), Positives = 62/93 (66%), Gaps = 4/93 (4%)
 Frame = -1

Query: 268 MATEQP-HKVEIESPAVQAPAPEKVDSVPKVEEDKTVLPPANEPKALAVTEKTPVSE--- 101
           MA EQ   KV++ESPAV APA E   +  +V ++K   PP  E KALAV EK P+ E   
Sbjct: 1   MAEEQKTSKVDVESPAVLAPAKEPTPAPVEVADEKIHNPPPVESKALAVVEK-PIEEHTP 59

Query: 100 EKTTGGSQDRDVALAGLEKEKRLSVLKAWEESE 2
           +K + GS DRDV LA LEKEK+ S +KAWEESE
Sbjct: 60  KKASSGSADRDVILADLEKEKKTSFIKAWEESE 92


>ref|NP_182106.1| Remorin [Arabidopsis thaliana] gi|75099946|sp|O80837.1|REMO_ARATH
           RecName: Full=Remorin; AltName: Full=DNA-binding protein
           gi|3386612|gb|AAC28542.1| remorin [Arabidopsis thaliana]
           gi|15028387|gb|AAK76670.1| putative remorin protein
           [Arabidopsis thaliana] gi|19310659|gb|AAL85060.1|
           putative remorin protein [Arabidopsis thaliana]
           gi|330255511|gb|AEC10605.1| Remorin [Arabidopsis
           thaliana]
          Length = 190

 Score = 84.0 bits (206), Expect = 1e-14
 Identities = 51/93 (54%), Positives = 62/93 (66%), Gaps = 4/93 (4%)
 Frame = -1

Query: 268 MATEQP-HKVEIESPAVQAPAPEKVDSVPKVEEDKTVLPPANEPKALAVTEKTPVSE--- 101
           MA EQ   KV++ESPAV APA E   +  +V ++K   PP  E KALAV EK P+ E   
Sbjct: 1   MAEEQKTSKVDVESPAVLAPAKEPTPAPVEVADEKIHNPPPVESKALAVVEK-PIEEHTP 59

Query: 100 EKTTGGSQDRDVALAGLEKEKRLSVLKAWEESE 2
           +K + GS DRDV LA LEKEK+ S +KAWEESE
Sbjct: 60  KKASSGSADRDVILADLEKEKKTSFIKAWEESE 92


>ref|XP_002511833.1| Remorin, putative [Ricinus communis] gi|223549013|gb|EEF50502.1|
           Remorin, putative [Ricinus communis]
          Length = 188

 Score = 81.3 bits (199), Expect = 8e-14
 Identities = 50/94 (53%), Positives = 61/94 (64%), Gaps = 5/94 (5%)
 Frame = -1

Query: 268 MATEQPHKVEIESPAVQAPAPEKVDSVPKVEEDKTVLP-PANEP---KALAVTEKTPVS- 104
           MA ++  K+E ESP   APA  K D    V  DK  +P P  +P   KALAV EK P S 
Sbjct: 1   MAEQEAKKLEAESPVAPAPAEAKSD----VAHDKATVPTPEEKPDDSKALAVVEKVPESG 56

Query: 103 EEKTTGGSQDRDVALAGLEKEKRLSVLKAWEESE 2
            +KT+GGS DRD+ALA +EKEKR S +KAWE+SE
Sbjct: 57  PKKTSGGSLDRDIALAEVEKEKRNSFIKAWEDSE 90


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