BLASTX nr result

ID: Bupleurum21_contig00028744 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00028744
         (278 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002274710.2| PREDICTED: uncharacterized protein LOC100247...    73   3e-11
emb|CBI25045.3| unnamed protein product [Vitis vinifera]               73   3e-11
ref|XP_002307610.1| predicted protein [Populus trichocarpa] gi|2...    72   6e-11
ref|XP_002300818.1| predicted protein [Populus trichocarpa] gi|2...    61   1e-07
ref|XP_003590573.1| JmjC domain-containing protein D [Medicago t...    57   1e-06

>ref|XP_002274710.2| PREDICTED: uncharacterized protein LOC100247818 [Vitis vinifera]
          Length = 508

 Score = 72.8 bits (177), Expect = 3e-11
 Identities = 36/75 (48%), Positives = 51/75 (68%), Gaps = 1/75 (1%)
 Frame = +2

Query: 2   HELEPLAVQSLHALVSLDHDRVNIADQSQSADPSTSNVYAVGEKGACK-LNVKDAYHLED 178
           HE+EPLA+Q+LH LV+L HD V +AD+++    ++ N   V  K   K +   D +HLED
Sbjct: 334 HEVEPLALQALHKLVALVHDSVKVADRTEPVHSTSGNDSDVKVKSEQKRIVASDLFHLED 393

Query: 179 DPVANIIWKLKPLTL 223
           DP+A I+W L+PLTL
Sbjct: 394 DPLAKILWTLEPLTL 408


>emb|CBI25045.3| unnamed protein product [Vitis vinifera]
          Length = 219

 Score = 72.8 bits (177), Expect = 3e-11
 Identities = 36/75 (48%), Positives = 51/75 (68%), Gaps = 1/75 (1%)
 Frame = +2

Query: 2   HELEPLAVQSLHALVSLDHDRVNIADQSQSADPSTSNVYAVGEKGACK-LNVKDAYHLED 178
           HE+EPLA+Q+LH LV+L HD V +AD+++    ++ N   V  K   K +   D +HLED
Sbjct: 45  HEVEPLALQALHKLVALVHDSVKVADRTEPVHSTSGNDSDVKVKSEQKRIVASDLFHLED 104

Query: 179 DPVANIIWKLKPLTL 223
           DP+A I+W L+PLTL
Sbjct: 105 DPLAKILWTLEPLTL 119


>ref|XP_002307610.1| predicted protein [Populus trichocarpa] gi|222857059|gb|EEE94606.1|
           predicted protein [Populus trichocarpa]
          Length = 224

 Score = 71.6 bits (174), Expect = 6e-11
 Identities = 38/75 (50%), Positives = 45/75 (60%), Gaps = 1/75 (1%)
 Frame = +2

Query: 2   HELEPLAVQSLHALVSLDHDRVNIADQSQSADPSTSNVYAVGEKGAC-KLNVKDAYHLED 178
           HELEP ++Q+LH LVS+ HDRVNI DQSQ    +  N   V  K  C K      + LED
Sbjct: 35  HELEPFSLQALHELVSVVHDRVNITDQSQCIQSTPPNDSKVSVKHECDKTLTSKLFFLED 94

Query: 179 DPVANIIWKLKPLTL 223
           DPVA I+W   P TL
Sbjct: 95  DPVAKILWTFDPSTL 109


>ref|XP_002300818.1| predicted protein [Populus trichocarpa] gi|222842544|gb|EEE80091.1|
           predicted protein [Populus trichocarpa]
          Length = 218

 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 36/77 (46%), Positives = 46/77 (59%), Gaps = 3/77 (3%)
 Frame = +2

Query: 2   HELEPLAVQSLHALVSLDHD--RVNIADQSQSADPSTSNVYAVGEKGACKLNVK-DAYHL 172
           HE EP ++Q+LH LVSL  D  RVNI DQSQ    + +N   V  K  C   +  + + L
Sbjct: 80  HEFEPRSLQALHELVSLVLDCVRVNITDQSQCIQSTPTNDSKVSMKDECDETLTTNLFFL 139

Query: 173 EDDPVANIIWKLKPLTL 223
           ED+PVA I+W L P TL
Sbjct: 140 EDNPVAKILWTLDPRTL 156


>ref|XP_003590573.1| JmjC domain-containing protein D [Medicago truncatula]
           gi|355479621|gb|AES60824.1| JmjC domain-containing
           protein D [Medicago truncatula]
          Length = 539

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 32/73 (43%), Positives = 43/73 (58%)
 Frame = +2

Query: 5   ELEPLAVQSLHALVSLDHDRVNIADQSQSADPSTSNVYAVGEKGACKLNVKDAYHLEDDP 184
           ELEP AVQ LH LVSL H+ V+ +   QS   S ++   +G     K+   +   L+DDP
Sbjct: 370 ELEPAAVQVLHELVSLVHNSVSASQDQQSLSTSINDYDLIGSDKYEKIATSE---LKDDP 426

Query: 185 VANIIWKLKPLTL 223
           VA I+W +KP TL
Sbjct: 427 VAKILWNVKPQTL 439


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