BLASTX nr result

ID: Bupleurum21_contig00028735 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00028735
         (366 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002273772.1| PREDICTED: mannan endo-1,4-beta-mannosidase ...   115   4e-24
emb|CBI21857.3| unnamed protein product [Vitis vinifera]              115   4e-24
gb|ABD47731.1| (1-4)-beta-mannan endohydrolase [Eucalyptus globu...   108   4e-22
ref|XP_002330687.1| predicted protein [Populus trichocarpa] gi|2...   104   6e-21
gb|ABK95966.1| unknown [Populus trichocarpa]                          104   6e-21

>ref|XP_002273772.1| PREDICTED: mannan endo-1,4-beta-mannosidase 2-like [Vitis vinifera]
          Length = 437

 Score =  115 bits (288), Expect = 4e-24
 Identities = 51/76 (67%), Positives = 63/76 (82%)
 Frame = -3

Query: 364 VFDIIYKSATKKGSGAGSFAWQFFVGGMEDMNDEFGIVPWQRPSTYKLITEQSCRLARIQ 185
           VFD++Y+SA K G+GAGSF WQF VGGME+ ND+FGIVPW+RP+TY+LITE +CRLARIQ
Sbjct: 360 VFDVMYQSARKNGAGAGSFVWQFLVGGMEEYNDDFGIVPWERPATYRLITEHTCRLARIQ 419

Query: 184 GVMPWQTQYLKHLCSK 137
           G +  Q   LK LCS+
Sbjct: 420 GGLAQQKASLKDLCSR 435


>emb|CBI21857.3| unnamed protein product [Vitis vinifera]
          Length = 432

 Score =  115 bits (288), Expect = 4e-24
 Identities = 51/76 (67%), Positives = 63/76 (82%)
 Frame = -3

Query: 364 VFDIIYKSATKKGSGAGSFAWQFFVGGMEDMNDEFGIVPWQRPSTYKLITEQSCRLARIQ 185
           VFD++Y+SA K G+GAGSF WQF VGGME+ ND+FGIVPW+RP+TY+LITE +CRLARIQ
Sbjct: 355 VFDVMYQSARKNGAGAGSFVWQFLVGGMEEYNDDFGIVPWERPATYRLITEHTCRLARIQ 414

Query: 184 GVMPWQTQYLKHLCSK 137
           G +  Q   LK LCS+
Sbjct: 415 GGLAQQKASLKDLCSR 430


>gb|ABD47731.1| (1-4)-beta-mannan endohydrolase [Eucalyptus globulus subsp.
           globulus]
          Length = 182

 Score =  108 bits (270), Expect = 4e-22
 Identities = 49/76 (64%), Positives = 62/76 (81%)
 Frame = -3

Query: 364 VFDIIYKSATKKGSGAGSFAWQFFVGGMEDMNDEFGIVPWQRPSTYKLITEQSCRLARIQ 185
           ++D+IYKSA K+G+GAGSF WQF+VGGME  ND+FGIVPW+RP TYKLIT+ SCR+ARI+
Sbjct: 108 IYDVIYKSAKKQGAGAGSFVWQFWVGGMEKYNDDFGIVPWERPETYKLITQHSCRMARIR 167

Query: 184 GVMPWQTQYLKHLCSK 137
           G    +   LK LCS+
Sbjct: 168 GSAELKGN-LKELCSQ 182


>ref|XP_002330687.1| predicted protein [Populus trichocarpa] gi|222872291|gb|EEF09422.1|
           predicted protein [Populus trichocarpa]
          Length = 435

 Score =  104 bits (260), Expect = 6e-21
 Identities = 46/74 (62%), Positives = 60/74 (81%)
 Frame = -3

Query: 364 VFDIIYKSATKKGSGAGSFAWQFFVGGMEDMNDEFGIVPWQRPSTYKLITEQSCRLARIQ 185
           +FDIIYKS+ +K +GAG+  WQ FV GM+D ND+FGIVPW+R ST +++T+QSCRLARI 
Sbjct: 359 IFDIIYKSSKRKRAGAGALIWQLFVEGMDDFNDDFGIVPWERESTNRILTDQSCRLARIH 418

Query: 184 GVMPWQTQYLKHLC 143
           G+ P Q +YLK LC
Sbjct: 419 GISP-QNKYLKELC 431


>gb|ABK95966.1| unknown [Populus trichocarpa]
          Length = 435

 Score =  104 bits (260), Expect = 6e-21
 Identities = 46/74 (62%), Positives = 60/74 (81%)
 Frame = -3

Query: 364 VFDIIYKSATKKGSGAGSFAWQFFVGGMEDMNDEFGIVPWQRPSTYKLITEQSCRLARIQ 185
           +FDIIYKS+ +K +GAG+  WQ FV GM+D ND+FGIVPW+R ST +++T+QSCRLARI 
Sbjct: 359 IFDIIYKSSKRKRAGAGALIWQLFVEGMDDFNDDFGIVPWERESTNRILTDQSCRLARIH 418

Query: 184 GVMPWQTQYLKHLC 143
           G+ P Q +YLK LC
Sbjct: 419 GISP-QNKYLKELC 431


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