BLASTX nr result

ID: Bupleurum21_contig00028715 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00028715
         (338 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAP45178.2| Zinc knuckle family protein [Solanum bulbocastanum]     59   5e-07
ref|NP_001175275.1| Os07g0583500 [Oryza sativa Japonica Group] g...    57   2e-06
gb|EEC82339.1| hypothetical protein OsI_26638 [Oryza sativa Indi...    57   2e-06
ref|XP_002444513.1| hypothetical protein SORBIDRAFT_07g023090 [S...    56   3e-06
ref|XP_002444098.1| hypothetical protein SORBIDRAFT_07g007680 [S...    56   3e-06

>gb|AAP45178.2| Zinc knuckle family protein [Solanum bulbocastanum]
          Length = 558

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 31/96 (32%), Positives = 54/96 (56%), Gaps = 3/96 (3%)
 Frame = +3

Query: 57  DSDVEKMACNSSDDEKTGCLIFDEENDMEEPYFE--AGMMFATVKIFRDAVRKQAIVERR 230
           D ++  +  +S DD     ++F+ + D+E+P FE    M+F++ K F+ A    A++ ++
Sbjct: 17  DDELMSLQGDSDDDNSKRFIVFNAKRDLEDPKFEFTLSMIFSSSKEFKWAAEGSAVMMKK 76

Query: 231 PIKQCRNYGIRAKFICEP-PCKWHIYASKMQNSDTY 335
            IK  +N   RA+ IC+   CKW IYASK    + +
Sbjct: 77  DIKFKKNESSRARAICKVLNCKWFIYASKANEDEPF 112


>ref|NP_001175275.1| Os07g0583500 [Oryza sativa Japonica Group]
           gi|255677923|dbj|BAH94003.1| Os07g0583500 [Oryza sativa
           Japonica Group]
          Length = 998

 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 35/100 (35%), Positives = 52/100 (52%), Gaps = 2/100 (2%)
 Frame = +3

Query: 18  KDDGVESDSTEYYDSDVEKMACNSSDDEKTGCLIFDEEN--DMEEPYFEAGMMFATVKIF 191
           K   V +D +E   SD E++   S DD+    L F   N  D+  P F+ GM+F++V++ 
Sbjct: 688 KGKKVVADLSEGDTSDDEQLHLPSDDDDDEFNLKFKSFNPEDINNPIFKVGMVFSSVELV 747

Query: 192 RDAVRKQAIVERRPIKQCRNYGIRAKFICEPPCKWHIYAS 311
           R A+ + ++  R  IK  RN   R K  C   C W+ YAS
Sbjct: 748 RKAISEYSMKNRVDIKMPRNDRTRIKAHCAEGCPWNFYAS 787


>gb|EEC82339.1| hypothetical protein OsI_26638 [Oryza sativa Indica Group]
          Length = 217

 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 35/100 (35%), Positives = 52/100 (52%), Gaps = 2/100 (2%)
 Frame = +3

Query: 18  KDDGVESDSTEYYDSDVEKMACNSSDDEKTGCLIFDEEN--DMEEPYFEAGMMFATVKIF 191
           K   V +D +E   SD E++   S DD+    L F   N  D+  P F+ GM+F++V++ 
Sbjct: 94  KGKKVVADLSEGDTSDDEQLHLPSDDDDDEFNLKFKSFNPEDINNPIFKVGMVFSSVELV 153

Query: 192 RDAVRKQAIVERRPIKQCRNYGIRAKFICEPPCKWHIYAS 311
           R A+ + ++  R  IK  RN   R K  C   C W+ YAS
Sbjct: 154 RKAISEYSMKNRVDIKMPRNDRTRIKAHCAEGCPWNFYAS 193


>ref|XP_002444513.1| hypothetical protein SORBIDRAFT_07g023090 [Sorghum bicolor]
           gi|241940863|gb|EES14008.1| hypothetical protein
           SORBIDRAFT_07g023090 [Sorghum bicolor]
          Length = 861

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 33/95 (34%), Positives = 50/95 (52%), Gaps = 2/95 (2%)
 Frame = +3

Query: 57  DSDVEKMACNSSDDEKTGCLIFDE--ENDMEEPYFEAGMMFATVKIFRDAVRKQAIVERR 230
           D+D E +    SD E    L F    E DM+ P F  G++FA V+  RDA+ + ++  R 
Sbjct: 132 DTDDEGLDLPESDGEGDVRLRFSSFSEEDMQNPTFHVGLVFADVQKLRDAITEYSVRNRV 191

Query: 231 PIKQCRNYGIRAKFICEPPCKWHIYASKMQNSDTY 335
            IK  RN   R K  C   C W++YAS  + ++++
Sbjct: 192 EIKMPRNEKGRLKAHCAEGCPWNLYASLDKRTNSF 226


>ref|XP_002444098.1| hypothetical protein SORBIDRAFT_07g007680 [Sorghum bicolor]
           gi|241940448|gb|EES13593.1| hypothetical protein
           SORBIDRAFT_07g007680 [Sorghum bicolor]
          Length = 626

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 33/95 (34%), Positives = 50/95 (52%), Gaps = 2/95 (2%)
 Frame = +3

Query: 57  DSDVEKMACNSSDDEKTGCLIFDE--ENDMEEPYFEAGMMFATVKIFRDAVRKQAIVERR 230
           D+D E +    SD E    L F    E DM+ P F  G++FA V+  RDA+ + ++  R 
Sbjct: 235 DTDDEGLDLPESDGEGDVRLRFSSFSEEDMQNPTFHVGLVFADVQKLRDAITEYSVRNRV 294

Query: 231 PIKQCRNYGIRAKFICEPPCKWHIYASKMQNSDTY 335
            IK  RN   R K  C   C W++YAS  + ++++
Sbjct: 295 EIKMPRNEKGRLKAHCAEGCPWNLYASLDKRTNSF 329


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