BLASTX nr result

ID: Bupleurum21_contig00028713 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00028713
         (294 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN68159.1| hypothetical protein VITISV_006519 [Vitis vinifera]   124   6e-27
emb|CBI25075.3| unnamed protein product [Vitis vinifera]              114   6e-24
ref|XP_002522045.1| conserved hypothetical protein [Ricinus comm...    97   2e-18
ref|XP_002300297.1| predicted protein [Populus trichocarpa] gi|2...    83   2e-14
ref|XP_004155487.1| PREDICTED: uncharacterized LOC101210501, par...    83   3e-14

>emb|CAN68159.1| hypothetical protein VITISV_006519 [Vitis vinifera]
          Length = 789

 Score =  124 bits (312), Expect = 6e-27
 Identities = 62/97 (63%), Positives = 73/97 (75%)
 Frame = -3

Query: 292 PMVKGKQVASKYMTTPRNKRNPSQQTSFRSVQNPRPTNTAVPKTRLVAKALVFQSPKKAM 113
           P VK   V  K +TTPRNK+ P  + SFRSV+NP+ T  AVPK R+VAKALVF SPKK  
Sbjct: 130 PEVKQSSVVVKALTTPRNKKYPQNRNSFRSVRNPKATTIAVPKNRVVAKALVFHSPKKPR 189

Query: 112 PAETSVEAHTPVTKLCEGMKGLEITSQRKRFLGYSGK 2
             +TS+E HTPV+K+C+GMK LEITSQRKR LGYS K
Sbjct: 190 QKKTSLELHTPVSKICQGMKQLEITSQRKRVLGYSVK 226


>emb|CBI25075.3| unnamed protein product [Vitis vinifera]
          Length = 531

 Score =  114 bits (286), Expect = 6e-24
 Identities = 56/90 (62%), Positives = 68/90 (75%)
 Frame = -3

Query: 292 PMVKGKQVASKYMTTPRNKRNPSQQTSFRSVQNPRPTNTAVPKTRLVAKALVFQSPKKAM 113
           P VK   V  K +TTPRNK+ P  + SFRSV+NP+ T  AVPK R+VAKALVF SPKK  
Sbjct: 130 PEVKQSSVVVKALTTPRNKKYPQNRNSFRSVRNPKATTIAVPKNRVVAKALVFHSPKKPR 189

Query: 112 PAETSVEAHTPVTKLCEGMKGLEITSQRKR 23
             +TS+E HTPV+K+C+GMK LEITSQRK+
Sbjct: 190 QKKTSLELHTPVSKICQGMKQLEITSQRKQ 219


>ref|XP_002522045.1| conserved hypothetical protein [Ricinus communis]
           gi|223538644|gb|EEF40245.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 694

 Score = 96.7 bits (239), Expect = 2e-18
 Identities = 49/90 (54%), Positives = 64/90 (71%)
 Frame = -3

Query: 283 KGKQVASKYMTTPRNKRNPSQQTSFRSVQNPRPTNTAVPKTRLVAKALVFQSPKKAMPAE 104
           K   V +K +TTPR K+  S   +FRSV+NP+ T TA+ K RLVAKALVF SPKK++  +
Sbjct: 148 KQPSVIAKALTTPRTKKQLSNLDAFRSVRNPKTTATAMSKNRLVAKALVFHSPKKSVKTK 207

Query: 103 TSVEAHTPVTKLCEGMKGLEITSQRKRFLG 14
           +S+E  TPV  LC+GMK LEIT  +K+ LG
Sbjct: 208 SSIELKTPVKTLCDGMKKLEITGAKKQRLG 237


>ref|XP_002300297.1| predicted protein [Populus trichocarpa] gi|222847555|gb|EEE85102.1|
           predicted protein [Populus trichocarpa]
          Length = 742

 Score = 83.2 bits (204), Expect = 2e-14
 Identities = 47/93 (50%), Positives = 61/93 (65%), Gaps = 1/93 (1%)
 Frame = -3

Query: 292 PMVKGKQ-VASKYMTTPRNKRNPSQQTSFRSVQNPRPTNTAVPKTRLVAKALVFQSPKKA 116
           P V+ KQ V SK +TTPRNK+  S   +F SV+NP+ T  AVP +R+VAKAL   SPKK+
Sbjct: 138 PNVRAKQSVVSKALTTPRNKKRLSNPDAFCSVRNPKATAVAVPNSRVVAKALF--SPKKS 195

Query: 115 MPAETSVEAHTPVTKLCEGMKGLEITSQRKRFL 17
              +TS+E  T V K+C G+K LEI   +K  L
Sbjct: 196 TRTKTSIELDTTVKKICAGIKNLEIADGKKHAL 228


>ref|XP_004155487.1| PREDICTED: uncharacterized LOC101210501, partial [Cucumis sativus]
          Length = 292

 Score = 82.8 bits (203), Expect = 3e-14
 Identities = 45/92 (48%), Positives = 55/92 (59%)
 Frame = -3

Query: 286 VKGKQVASKYMTTPRNKRNPSQQTSFRSVQNPRPTNTAVPKTRLVAKALVFQSPKKAMPA 107
           VK KQ  +K MTTPRN++  S   +F SV+N +  +   PKT  VAKAL FQSPKK    
Sbjct: 137 VKPKQTHAKAMTTPRNRKLNSNTNAFLSVKNSKTISAEEPKTTKVAKALFFQSPKKDTKK 196

Query: 106 ETSVEAHTPVTKLCEGMKGLEITSQRKRFLGY 11
            TS E +T V  +C  MK LEI S  K  LG+
Sbjct: 197 RTSTEVNTSVKTICAAMKKLEINSANKNVLGH 228


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