BLASTX nr result

ID: Bupleurum21_contig00028686 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00028686
         (732 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002273919.1| PREDICTED: 60S ribosomal protein L24, mitoch...   200   2e-49
emb|CAN79404.1| hypothetical protein VITISV_028074 [Vitis vinifera]   200   2e-49
gb|ACU23921.1| unknown [Glycine max]                                  191   1e-46
ref|XP_004146126.1| PREDICTED: uncharacterized protein LOC101212...   189   4e-46
ref|XP_003538044.1| PREDICTED: 39S ribosomal protein L28, mitoch...   189   7e-46

>ref|XP_002273919.1| PREDICTED: 60S ribosomal protein L24, mitochondrial [Vitis
           vinifera] gi|302142683|emb|CBI19886.3| unnamed protein
           product [Vitis vinifera]
          Length = 216

 Score =  200 bits (509), Expect = 2e-49
 Identities = 97/134 (72%), Positives = 107/134 (79%)
 Frame = +1

Query: 1   QYGNNVSEKGGNTTRRFWKPNVQEKRLFSYILDRHVRVKVTTHAIRCIDKAGGIDEYLLK 180
           Q+GN VSE GGN TRR WKPNVQEKRLFSYILDRH+RVKVTTHA+RCIDKAGGIDEYLLK
Sbjct: 50  QFGNRVSEDGGNKTRRSWKPNVQEKRLFSYILDRHIRVKVTTHALRCIDKAGGIDEYLLK 109

Query: 181 TPYHKMDTEMGLLWKAKIEKMYEELGEKEVVFFSAXXXXXXXXXXXXLDIAKKTHRRDAR 360
           TPYHKMDTEMGL WKAKIEKMYEELGE +VVFFS             L +A++  RR+AR
Sbjct: 110 TPYHKMDTEMGLFWKAKIEKMYEELGEMDVVFFSPEDEVKFEQGFKELKLAERAARREAR 169

Query: 361 RKIYGWSGNTKQIK 402
           R IYG SG   Q++
Sbjct: 170 RHIYGGSGKQVQLE 183


>emb|CAN79404.1| hypothetical protein VITISV_028074 [Vitis vinifera]
          Length = 1084

 Score =  200 bits (509), Expect = 2e-49
 Identities = 97/134 (72%), Positives = 107/134 (79%)
 Frame = +1

Query: 1   QYGNNVSEKGGNTTRRFWKPNVQEKRLFSYILDRHVRVKVTTHAIRCIDKAGGIDEYLLK 180
           Q+GN VSE GGN TRR WKPNVQEKRLFSYILDRH+RVKVTTHA+RCIDKAGGIDEYLLK
Sbjct: 50  QFGNRVSEDGGNKTRRSWKPNVQEKRLFSYILDRHIRVKVTTHALRCIDKAGGIDEYLLK 109

Query: 181 TPYHKMDTEMGLLWKAKIEKMYEELGEKEVVFFSAXXXXXXXXXXXXLDIAKKTHRRDAR 360
           TPYHKMDTEMGL WKAKIEKMYEELGE +VVFFS             L +A++  RR+AR
Sbjct: 110 TPYHKMDTEMGLFWKAKIEKMYEELGEMDVVFFSPEDEVKFEQGFKELKLAERAARREAR 169

Query: 361 RKIYGWSGNTKQIK 402
           R IYG SG   Q++
Sbjct: 170 RHIYGGSGKQVQLE 183


>gb|ACU23921.1| unknown [Glycine max]
          Length = 235

 Score =  191 bits (485), Expect = 1e-46
 Identities = 93/132 (70%), Positives = 107/132 (81%)
 Frame = +1

Query: 1   QYGNNVSEKGGNTTRRFWKPNVQEKRLFSYILDRHVRVKVTTHAIRCIDKAGGIDEYLLK 180
           Q+GN VSE GGN +RR WKPNVQEKRLFSYILDRHVRVKVTTHA+RCIDKAGGIDEYLLK
Sbjct: 54  QFGNRVSEDGGNKSRRTWKPNVQEKRLFSYILDRHVRVKVTTHALRCIDKAGGIDEYLLK 113

Query: 181 TPYHKMDTEMGLLWKAKIEKMYEELGEKEVVFFSAXXXXXXXXXXXXLDIAKKTHRRDAR 360
           TPYHKMDTEMG+LWKAKIEK+YEELG KEVVFFS             L ++++  R++ R
Sbjct: 114 TPYHKMDTEMGILWKAKIEKLYEELGNKEVVFFSPEDEVKFEQEFEDLKLSEREARKEVR 173

Query: 361 RKIYGWSGNTKQ 396
           RK+Y  +G +KQ
Sbjct: 174 RKMY--TGMSKQ 183


>ref|XP_004146126.1| PREDICTED: uncharacterized protein LOC101212331 [Cucumis sativus]
           gi|449528875|ref|XP_004171427.1| PREDICTED:
           uncharacterized LOC101212331 [Cucumis sativus]
          Length = 221

 Score =  189 bits (481), Expect = 4e-46
 Identities = 90/134 (67%), Positives = 106/134 (79%)
 Frame = +1

Query: 1   QYGNNVSEKGGNTTRRFWKPNVQEKRLFSYILDRHVRVKVTTHAIRCIDKAGGIDEYLLK 180
           ++GN VSE GGN +RR WKPNVQEKRLFSYILDRH+RVKVTTHA+RCIDKAGGIDEYLLK
Sbjct: 54  RFGNRVSEDGGNKSRRNWKPNVQEKRLFSYILDRHIRVKVTTHALRCIDKAGGIDEYLLK 113

Query: 181 TPYHKMDTEMGLLWKAKIEKMYEELGEKEVVFFSAXXXXXXXXXXXXLDIAKKTHRRDAR 360
           TPYHKMDTE+GL WK+KIE +YEELG+ EVVFFS             L ++++  RR+AR
Sbjct: 114 TPYHKMDTELGLFWKSKIETLYEELGKMEVVFFSPEDEVKFEQRFKELKLSERAARREAR 173

Query: 361 RKIYGWSGNTKQIK 402
           R++YG S    QIK
Sbjct: 174 RQMYGSSAKLNQIK 187


>ref|XP_003538044.1| PREDICTED: 39S ribosomal protein L28, mitochondrial-like [Glycine
           max]
          Length = 235

 Score =  189 bits (479), Expect = 7e-46
 Identities = 90/134 (67%), Positives = 104/134 (77%)
 Frame = +1

Query: 1   QYGNNVSEKGGNTTRRFWKPNVQEKRLFSYILDRHVRVKVTTHAIRCIDKAGGIDEYLLK 180
           Q+GN VSE GGN +RR WKPNVQEKRLFSYILDRHVRVK+TTHA+RCIDKAGGIDEYL+K
Sbjct: 54  QFGNRVSEDGGNKSRRTWKPNVQEKRLFSYILDRHVRVKITTHALRCIDKAGGIDEYLMK 113

Query: 181 TPYHKMDTEMGLLWKAKIEKMYEELGEKEVVFFSAXXXXXXXXXXXXLDIAKKTHRRDAR 360
           TPYHKMDTEMG+LWKAKIEK+YEELG KEVVFFS             L + ++  R++ R
Sbjct: 114 TPYHKMDTEMGILWKAKIEKLYEELGNKEVVFFSPEDEAKFEQEFNDLKLTEREARKEVR 173

Query: 361 RKIYGWSGNTKQIK 402
           RK+Y      K I+
Sbjct: 174 RKMYTGMSKHKLIE 187


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