BLASTX nr result

ID: Bupleurum21_contig00028681 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00028681
         (359 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003632855.1| PREDICTED: dof zinc finger protein DOF1.7-li...    65   6e-09
ref|XP_003529737.1| PREDICTED: dof zinc finger protein DOF1.7-li...    62   5e-08
ref|XP_003533016.1| PREDICTED: dof zinc finger protein DOF1.7 [G...    57   2e-06

>ref|XP_003632855.1| PREDICTED: dof zinc finger protein DOF1.7-like [Vitis vinifera]
          Length = 216

 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 42/114 (36%), Positives = 60/114 (52%), Gaps = 4/114 (3%)
 Frame = +2

Query: 2   EKQEPSSASASVVKNQDCSLLESGGTFGSLLEVNNGNFGNMIEGLXXXXXXXXXXXXGLV 181
           +K EPS    +   +QD  +L+  G+F SLL  +NG FG+++E L               
Sbjct: 105 QKSEPSGIYVTAA-DQDRRMLDISGSFSSLL-ASNGQFGSLLESLNPTGSVRGVPLSAFS 162

Query: 182 ----SNLIRNPFVEFGNDKNSEGFMGAQNDEDLSCWSGTNGCLDLATYTSGSSF 331
               S+  R P +E  ++ NSE F+G Q   D +CW+G NG  DLA YT GS+F
Sbjct: 163 ETPNSDSGRTPAMELQSNGNSESFLGIQTG-DSNCWNGGNGWPDLAIYTPGSTF 215


>ref|XP_003529737.1| PREDICTED: dof zinc finger protein DOF1.7-like [Glycine max]
          Length = 211

 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 41/115 (35%), Positives = 59/115 (51%), Gaps = 8/115 (6%)
 Frame = +2

Query: 11  EPSSASASVVKNQDCSLLESGGTFGSLLEVNNGNFGNMIEGLXXXXXXXXXXXX------ 172
           +P+    + V      L   GG+F SLL  ++G+FG ++EGL                  
Sbjct: 98  DPTRICTNPVDQDQRVLNIGGGSFSSLL-ASSGHFGTLLEGLNPSGSGLKMGEFVEGVSS 156

Query: 173 --GLVSNLIRNPFVEFGNDKNSEGFMGAQNDEDLSCWSGTNGCLDLATYTSGSSF 331
             GL  +   NP ++  +++NSE F+G QN  D SCW+GT+G  DLA YT G SF
Sbjct: 157 DPGLNLDSGLNPDLQVQSNENSESFLGLQNG-DSSCWNGTHGWSDLAIYTPGPSF 210


>ref|XP_003533016.1| PREDICTED: dof zinc finger protein DOF1.7 [Glycine max]
          Length = 213

 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 47/129 (36%), Positives = 65/129 (50%), Gaps = 23/129 (17%)
 Frame = +2

Query: 14  PSSASASVVK-----------NQDCSLLE-SGGTFGSLLEVNNGNFGNMIEGLXXXXXXX 157
           PSS+S++V             +QD  +L   GG+F SLL  ++G+FG ++EGL       
Sbjct: 88  PSSSSSAVSDPDPTRNCTNPVDQDQRVLNIGGGSFSSLL-ASSGHFGTLLEGLNPTGSSL 146

Query: 158 XXXXXG----------LVSNLIRNPFVEF-GNDKNSEGFMGAQNDEDLSCWSGTNGCLDL 304
                G          LVS   +NP ++    +  SE F+G QN  D SCW+GT+G  DL
Sbjct: 147 KMGEFGEGVSSDPGLNLVSG--QNPGLQVQSTNGRSESFLGLQNG-DSSCWNGTHGWSDL 203

Query: 305 ATYTSGSSF 331
           A YT G SF
Sbjct: 204 AIYTPGPSF 212


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