BLASTX nr result

ID: Bupleurum21_contig00028671 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00028671
         (461 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI28248.3| unnamed protein product [Vitis vinifera]              110   2e-22
ref|XP_002282408.1| PREDICTED: CCR4-NOT transcription complex su...   110   2e-22
ref|XP_002531955.1| conserved hypothetical protein [Ricinus comm...   103   1e-20
ref|XP_003549742.1| PREDICTED: CCR4-NOT transcription complex su...   102   2e-20
ref|XP_002868420.1| binding protein [Arabidopsis lyrata subsp. l...   100   9e-20

>emb|CBI28248.3| unnamed protein product [Vitis vinifera]
          Length = 812

 Score =  110 bits (274), Expect = 2e-22
 Identities = 61/140 (43%), Positives = 79/140 (56%)
 Frame = +2

Query: 8   VLNQLMQKKQGDPKVIHNIAIVKNFLDGFVYPKKFLGALNDVKKQSEELANASRENVKGI 187
           VLNQL+QKK+ DPKV+HNIAI + F DG   PKK L  LN+VKK+SEELA+AS EN +  
Sbjct: 50  VLNQLLQKKEDDPKVLHNIAIAEYFRDGCSDPKKLLEVLNNVKKRSEELAHASGENAEA- 108

Query: 188 XXXXXXXXXXXXXXXXXXXXXXXXXXXXMVLNAEYETHVTSFNMAVTWFNLCVYSKSFSI 367
                                       MV   E++T V + N+A+ WF+L  Y K+ S+
Sbjct: 109 -ATNLGNKVGSKGTNTMALQFSAASSGSMVYTDEFDTSVATLNLAIVWFHLHEYGKALSV 167

Query: 368 LGPMYQNLAPISEGIAFRIC 427
           L  +YQN+ PI E  A  IC
Sbjct: 168 LESLYQNIEPIDETTALHIC 187


>ref|XP_002282408.1| PREDICTED: CCR4-NOT transcription complex subunit 10-like [Vitis
           vinifera]
          Length = 857

 Score =  110 bits (274), Expect = 2e-22
 Identities = 61/140 (43%), Positives = 79/140 (56%)
 Frame = +2

Query: 8   VLNQLMQKKQGDPKVIHNIAIVKNFLDGFVYPKKFLGALNDVKKQSEELANASRENVKGI 187
           VLNQL+QKK+ DPKV+HNIAI + F DG   PKK L  LN+VKK+SEELA+AS EN +  
Sbjct: 50  VLNQLLQKKEDDPKVLHNIAIAEYFRDGCSDPKKLLEVLNNVKKRSEELAHASGENAEA- 108

Query: 188 XXXXXXXXXXXXXXXXXXXXXXXXXXXXMVLNAEYETHVTSFNMAVTWFNLCVYSKSFSI 367
                                       MV   E++T V + N+A+ WF+L  Y K+ S+
Sbjct: 109 -ATNLGNKVGSKGTNTMALQFSAASSGSMVYTDEFDTSVATLNLAIVWFHLHEYGKALSV 167

Query: 368 LGPMYQNLAPISEGIAFRIC 427
           L  +YQN+ PI E  A  IC
Sbjct: 168 LESLYQNIEPIDETTALHIC 187


>ref|XP_002531955.1| conserved hypothetical protein [Ricinus communis]
           gi|223528401|gb|EEF30437.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 851

 Score =  103 bits (258), Expect = 1e-20
 Identities = 56/140 (40%), Positives = 76/140 (54%)
 Frame = +2

Query: 8   VLNQLMQKKQGDPKVIHNIAIVKNFLDGFVYPKKFLGALNDVKKQSEELANASRENVKGI 187
           VL QL QKK+ DPKV+HNIAI + F DG   PKK L  LN+VKK+SE+LA AS E V+  
Sbjct: 68  VLYQLKQKKEDDPKVLHNIAIAEYFRDGCSDPKKLLDVLNNVKKKSEQLAQASGEQVEAA 127

Query: 188 XXXXXXXXXXXXXXXXXXXXXXXXXXXXMVLNAEYETHVTSFNMAVTWFNLCVYSKSFSI 367
                                       +V   E++  V + N+A+ WF+L  Y+K+ S+
Sbjct: 128 NSAVNKATQGSKGSGATSHQFSAANGGTLVYMDEFDPAVATLNIAIIWFHLHEYTKALSV 187

Query: 368 LGPMYQNLAPISEGIAFRIC 427
           L P+Y N+ PI E  A  +C
Sbjct: 188 LEPLYHNIEPIDETTALHVC 207


>ref|XP_003549742.1| PREDICTED: CCR4-NOT transcription complex subunit 10-like [Glycine
           max]
          Length = 857

 Score =  102 bits (255), Expect = 2e-20
 Identities = 56/140 (40%), Positives = 78/140 (55%)
 Frame = +2

Query: 8   VLNQLMQKKQGDPKVIHNIAIVKNFLDGFVYPKKFLGALNDVKKQSEELANASRENVKGI 187
           VLNQL+QKKQGDPKV+HNIAIV  F DG   PKK L  +N +K++++ELA AS E  + +
Sbjct: 55  VLNQLLQKKQGDPKVLHNIAIVDFFRDGCSDPKKLLEVINGIKRKNDELALASEEQGESV 114

Query: 188 XXXXXXXXXXXXXXXXXXXXXXXXXXXXMVLNAEYETHVTSFNMAVTWFNLCVYSKSFSI 367
                                       M  + E+++ V   N+A+ WF+L  Y K+ S+
Sbjct: 115 NNVGNKVLGSKGSNASVHQFSGANSTSTMYTD-EFDSSVAMLNIAIVWFHLHDYVKTLSV 173

Query: 368 LGPMYQNLAPISEGIAFRIC 427
           L P++QN+ PI E  A  IC
Sbjct: 174 LEPLFQNIEPIDETTALHIC 193


>ref|XP_002868420.1| binding protein [Arabidopsis lyrata subsp. lyrata]
           gi|297314256|gb|EFH44679.1| binding protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 787

 Score =  100 bits (250), Expect = 9e-20
 Identities = 59/142 (41%), Positives = 80/142 (56%)
 Frame = +2

Query: 2   FTVLNQLMQKKQGDPKVIHNIAIVKNFLDGFVYPKKFLGALNDVKKQSEELANASRENVK 181
           F +L QL QKK  DPKV+HN+AI + F DG    +K L  LN VKKQSEELA+A+R+ ++
Sbjct: 48  FDILIQLDQKKHNDPKVLHNMAIAEYFKDGCSNSEKLLQGLNRVKKQSEELASAARDQLE 107

Query: 182 GIXXXXXXXXXXXXXXXXXXXXXXXXXXXXMVLNAEYETHVTSFNMAVTWFNLCVYSKSF 361
                                          V    +++ VT+ N+AVTWF+L  YSKSF
Sbjct: 108 A----------------------ANPGTNASVPKDHFDSTVTTLNIAVTWFHLHDYSKSF 145

Query: 362 SILGPMYQNLAPISEGIAFRIC 427
           SIL P++QN+  + E IA +IC
Sbjct: 146 SILEPLFQNIQRLDETIALQIC 167


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