BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00028661
         (583 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002519367.1| replication factor C / DNA polymerase III ga...    82   7e-14
ref|XP_004133740.1| PREDICTED: uncharacterized protein LOC101212...    82   9e-14
ref|XP_002328811.1| predicted protein [Populus trichocarpa] gi|2...    75   1e-11
gb|AFN58239.1| trichome branching-like protein [Gossypium arboreum]    64   1e-08
emb|CAN80768.1| hypothetical protein VITISV_013865 [Vitis vinifera]    64   1e-08

>ref|XP_002519367.1| replication factor C / DNA polymerase III gamma-tau subunit,
           putative [Ricinus communis] gi|223541434|gb|EEF42984.1|
           replication factor C / DNA polymerase III gamma-tau
           subunit, putative [Ricinus communis]
          Length = 1270

 Score = 82.0 bits (201), Expect = 7e-14
 Identities = 67/191 (35%), Positives = 92/191 (48%), Gaps = 16/191 (8%)
 Frame = -2

Query: 528 NLQDENDGSWSGKGKDKRVFLCNWKSQKSGSEKSMKSLGQIVR-YERRGKGDENEDGGXX 352
           N     D  +   GK+KRVFL NWK+QKS SEKS  +   +   YE R   D  +D    
Sbjct: 67  NSNSHMDSYFRNNGKEKRVFLYNWKTQKSSSEKSAIARNDLDEDYESRSVQDSVDDS--- 123

Query: 351 XXXXXXXXXXXXXDRRNGGRDSKTDTFFAD-RYAALLFGCKGTKLIPPVRRNTM--KRKV 181
                        D RN   DSK+DT+  D R ++++F C+   L+ P  R  M  K+K 
Sbjct: 124 -----------LSDARNAA-DSKSDTYLGDSRSSSMIFRCRDANLVSPSMRRAMGIKKKS 171

Query: 180 KRSARSAALWEHHLQQQIVLSK-----------NRREDSEGFVDQSDDT-GYFNSEDLRV 37
           K++     +   + Q++I L +             REDS   V+QSDDT  Y NSEDLR 
Sbjct: 172 KKTDTHLDILSRYQQKEINLRRLLKSHPSIALGLGREDS---VEQSDDTEDYSNSEDLRK 228

Query: 36  YSAESPFLARI 4
            S  SP L ++
Sbjct: 229 ISGASPLLIKL 239


>ref|XP_004133740.1| PREDICTED: uncharacterized protein LOC101212356 [Cucumis sativus]
           gi|449478091|ref|XP_004155220.1| PREDICTED:
           uncharacterized protein LOC101227259 [Cucumis sativus]
          Length = 1267

 Score = 81.6 bits (200), Expect = 9e-14
 Identities = 68/204 (33%), Positives = 96/204 (47%), Gaps = 19/204 (9%)
 Frame = -2

Query: 558 NGDKFTDSKVNLQDENDGSWSGKGKDKRVFLCNWKSQKSGSEKSMKSLGQIVRYERRGKG 379
           +G    D+ V L++EN        KDK+++L NWKS KS SEKS       ++ E     
Sbjct: 76  SGQSQLDAIVPLRNENRNP-----KDKKIYLYNWKSHKSSSEKS-----ATLQNEDHDGN 125

Query: 378 DENEDGGXXXXXXXXXXXXXXXDRRNGGRDSKTDTFFADRYAALLFGCKGTKLI----PP 211
           D+N DG                D RNGG DSK+DT+  D Y++++F C    L+    P 
Sbjct: 126 DDNNDGS--YSVPGVSLDGSLSDARNGG-DSKSDTYLGDLYSSMVFRCGDANLVSYSGPS 182

Query: 210 VRR-NTMKRKVKRSARSAALWEHH-------------LQQQIVLSKNRREDSEGFVDQSD 73
            +R +  K+K K+      +   H             L+    LS N  +D    ++QSD
Sbjct: 183 AKRTSAFKKKSKKHCSHLDVLSRHQQKGPGPLMGRKLLEGHPSLSINFSQDDS--IEQSD 240

Query: 72  DT-GYFNSEDLRVYSAESPFLARI 4
           DT  Y NSED R YSA SP L ++
Sbjct: 241 DTEDYSNSEDFRRYSAASPLLLKL 264


>ref|XP_002328811.1| predicted protein [Populus trichocarpa] gi|222839109|gb|EEE77460.1|
           predicted protein [Populus trichocarpa]
          Length = 1197

 Score = 74.7 bits (182), Expect = 1e-11
 Identities = 66/203 (32%), Positives = 94/203 (46%), Gaps = 14/203 (6%)
 Frame = -2

Query: 570 RSNSNGDKFTDSKVNLQDENDGSWSGKGKDKRVFLCNWKSQKSGSEKSMKSLGQIVRYER 391
           ++   G    ++  +L D +  S +  GKDKRVFL NWKSQKS SEKS  +         
Sbjct: 72  QNGGGGGSHNNNSAHL-DSHFKSGNNHGKDKRVFLYNWKSQKSSSEKSALA--------- 121

Query: 390 RGKGDENEDGGXXXXXXXXXXXXXXXDRRNGGRDSKTDTFFAD-RYAALLFGCKGTKLIP 214
             + D ++D                 D RN G DSK+DT+  + R AA++F C+   L+ 
Sbjct: 122 --RNDADDD--YESCSIQGSLDDSLSDARNAG-DSKSDTYLGETRSAAMIFRCRDANLVS 176

Query: 213 PVRRNTM---KRKVKRSARSAALWEHHLQQQIVLSKNRREDSEGF---------VDQSDD 70
           P  R  M   K+  K +AR   L  +  ++  +    +   S G          V+QSDD
Sbjct: 177 PSMRRAMGIKKKSKKTNARFDVLSRYQQKEMNLRRLLKGHPSMGLGLGLGRDDVVEQSDD 236

Query: 69  T-GYFNSEDLRVYSAESPFLARI 4
           T  Y NSE LR  S  SP L ++
Sbjct: 237 TEEYSNSEYLRKISGASPLLLKL 259


>gb|AFN58239.1| trichome branching-like protein [Gossypium arboreum]
          Length = 1223

 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 61/205 (29%), Positives = 98/205 (47%), Gaps = 17/205 (8%)
 Frame = -2

Query: 567 SNSNGDKFTD-SKVNLQDENDG-----SWSGKGKDKRVFLCNWKSQKSGSEKSMKSLGQI 406
           S SNG+   D S +  + E++G     + +G  KDKRVFL NW+SQKS S          
Sbjct: 56  SRSNGNAHLDLSLLPFRVESNGHGRITNSNGNEKDKRVFLYNWRSQKSSS---------- 105

Query: 405 VRYERRGKGDEN-EDGGXXXXXXXXXXXXXXXDRRNGGR---DSKTDTFFAD-RYAALLF 241
           V  +  G+ D++ +DG                +  +  R   DSK+DT   + R A++LF
Sbjct: 106 VNVDDDGEDDDDFDDGDDGDQSSSWIQGSVDENSLSDARKCGDSKSDTCLGESRSASMLF 165

Query: 240 GCKGTKLIPPVRRNTMK-----RKVKRSARSAALWEHHLQQQIVLSKNRREDSEGFVDQS 76
            C+   L+  V  +  +     +  K++  +  ++  + Q++  +++N        VDQS
Sbjct: 166 RCRDANLVSLVTPSAKRMLGANKNSKKNGSNFDVFSRYEQKKNGVNRN------SSVDQS 219

Query: 75  DDT-GYFNSEDLRVYSAESPFLARI 4
           DDT  Y NSED R  S  SP L ++
Sbjct: 220 DDTEDYSNSEDFRKISGASPLLLKL 244


>emb|CAN80768.1| hypothetical protein VITISV_013865 [Vitis vinifera]
          Length = 785

 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 56/179 (31%), Positives = 83/179 (46%), Gaps = 18/179 (10%)
 Frame = -2

Query: 486 KDKRVFLCNWKSQKSGSEKSMKSLGQIVRYERRGKGDENEDGGXXXXXXXXXXXXXXXDR 307
           + KRVFL NW+S    S+K+  S+         G+ +++EDG                  
Sbjct: 67  ESKRVFLYNWRS---ASQKAKSSVN--------GENEDDEDGVDGSSVDDSLSDW----- 110

Query: 306 RNGGRDSKTDTFFADR-----YAALLFGCKGTKLIPPVRRNTMKRKV-KRSARSAALWEH 145
              G DSK+DT+   R     +A+++F C+   L+   R + +K+K   ++  S AL  H
Sbjct: 111 -RNGVDSKSDTYIGGRRHRRHHASMIFRCRDANLVAMGRPSGIKKKKGSKNVHSIALLRH 169

Query: 144 HLQQQ-----IVLSKNRREDSEGF------VDQSDDTG-YFNSEDLRVYSAESPFLARI 4
             QQQ        S N +   EG       V+QSDDT  Y+NSED R     SP L+R+
Sbjct: 170 QQQQQQQQLNTARSGNSKRLLEGILGRDDSVEQSDDTEEYYNSEDFRRICEASPLLSRL 228