BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00028660
         (339 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002265372.1| PREDICTED: pentatricopeptide repeat-containi...   176   2e-42
emb|CAN73046.1| hypothetical protein VITISV_008668 [Vitis vinifera]   175   3e-42
ref|XP_003543024.1| PREDICTED: pentatricopeptide repeat-containi...   160   1e-37
gb|ABN08713.1| Pentatricopeptide repeat [Medicago truncatula]         156   1e-36
ref|XP_002329801.1| predicted protein [Populus trichocarpa] gi|2...   156   2e-36

>ref|XP_002265372.1| PREDICTED: pentatricopeptide repeat-containing protein At5g46100
           [Vitis vinifera] gi|296087974|emb|CBI35257.3| unnamed
           protein product [Vitis vinifera]
          Length = 503

 Score =  176 bits (445), Expect = 2e-42
 Identities = 80/112 (71%), Positives = 92/112 (82%)
 Frame = +1

Query: 4   CDALKFQEAANFLDEMVFGGVSPNRLTWSLHVRINNTVVRGLCETDSNRAFQLYLSMRTR 183
           CD  KF EAANFLDEMV GG+SPNRLTWSLHVRI+N VV+GLC    NRAFQLYLSMRTR
Sbjct: 342 CDICKFHEAANFLDEMVLGGISPNRLTWSLHVRIHNIVVQGLCTEHPNRAFQLYLSMRTR 401

Query: 184 GISVEAETFDIFVD*YCKKGDLHKAARIVKEMVVDGCIPSETTWNNIMTGFW 339
           GIS++A+TFD  V+ +C KGDLHKAA +V EMV+DGCIP E TWN ++  FW
Sbjct: 402 GISIDAKTFDSLVNYFCNKGDLHKAAHLVDEMVLDGCIPDEVTWNAVVCAFW 453


>emb|CAN73046.1| hypothetical protein VITISV_008668 [Vitis vinifera]
          Length = 477

 Score =  175 bits (444), Expect = 3e-42
 Identities = 80/112 (71%), Positives = 92/112 (82%)
 Frame = +1

Query: 4   CDALKFQEAANFLDEMVFGGVSPNRLTWSLHVRINNTVVRGLCETDSNRAFQLYLSMRTR 183
           CD  KF EAANFLDEMV GG+SPNRLTWSLHVRI+N VV+GLC    NRAFQLYLSMRTR
Sbjct: 342 CDICKFHEAANFLDEMVLGGISPNRLTWSLHVRIHNIVVQGLCTEHPNRAFQLYLSMRTR 401

Query: 184 GISVEAETFDIFVD*YCKKGDLHKAARIVKEMVVDGCIPSETTWNNIMTGFW 339
           GIS++A+TFD  V+ +C KGDLHKAA +V EMV+DGCIP E TWN ++  FW
Sbjct: 402 GISIDAKTFDSLVNYFCNKGDLHKAAHLVDEMVLDGCIPDEXTWNAVVCAFW 453


>ref|XP_003543024.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g46100-like [Glycine max]
          Length = 479

 Score =  160 bits (404), Expect = 1e-37
 Identities = 76/114 (66%), Positives = 91/114 (79%), Gaps = 1/114 (0%)
 Frame = +1

Query: 1   LCDALKFQEAANFLDEMVFGGVSPNRLTWSLHVRINNTVVRGLCET-DSNRAFQLYLSMR 177
           LC A  +QEAANF+DEMV GG+SPNR +WSLHVR++N VV+GLC   D  RAFQLYLSMR
Sbjct: 341 LCAAGSYQEAANFIDEMVLGGISPNRASWSLHVRMHNMVVQGLCNNVDPPRAFQLYLSMR 400

Query: 178 TRGISVEAETFDIFVD*YCKKGDLHKAARIVKEMVVDGCIPSETTWNNIMTGFW 339
           TR ISVE +TFD  V  +CK+GDLHKAARI++EMV+DGCIP E  WN ++ G W
Sbjct: 401 TRCISVEIDTFDCLVKCFCKRGDLHKAARILEEMVLDGCIPDEGVWNVVIGGLW 454


>gb|ABN08713.1| Pentatricopeptide repeat [Medicago truncatula]
          Length = 479

 Score =  156 bits (395), Expect = 1e-36
 Identities = 72/114 (63%), Positives = 89/114 (78%), Gaps = 1/114 (0%)
 Frame = +1

Query: 1   LCDALKFQEAANFLDEMVFGGVSPNRLTWSLHVRINNTVVRGLCET-DSNRAFQLYLSMR 177
           LC A  +QEAANF+DEM  GG+SPNR +W+ HV+++N VV+GLC   D  RAFQLYLSMR
Sbjct: 341 LCAACNYQEAANFIDEMALGGISPNRASWTFHVKMHNMVVQGLCNNVDPTRAFQLYLSMR 400

Query: 178 TRGISVEAETFDIFVD*YCKKGDLHKAARIVKEMVVDGCIPSETTWNNIMTGFW 339
           TRGISVE  TFD  V  +CK+GDL+KAARI++EM++DGCIP E  WN +M G W
Sbjct: 401 TRGISVEIGTFDCLVKCFCKRGDLNKAARILEEMILDGCIPDEGMWNVLMCGLW 454


>ref|XP_002329801.1| predicted protein [Populus trichocarpa] gi|222870863|gb|EEF07994.1|
           predicted protein [Populus trichocarpa]
          Length = 478

 Score =  156 bits (394), Expect = 2e-36
 Identities = 71/113 (62%), Positives = 89/113 (78%), Gaps = 1/113 (0%)
 Frame = +1

Query: 4   CDALKFQEAANFLDEMVFGGVSPNRLTWSLHVRINNTVVRGLCETDS-NRAFQLYLSMRT 180
           C+  KFQEAA +LDEMV G +SPNR+TWSLHV++NN VV+GLC   + NR+FQLY+ MRT
Sbjct: 342 CNIRKFQEAATYLDEMVLGQISPNRVTWSLHVKLNNMVVQGLCTNGNLNRSFQLYIGMRT 401

Query: 181 RGISVEAETFDIFVD*YCKKGDLHKAARIVKEMVVDGCIPSETTWNNIMTGFW 339
           RGIS++A TFD  V  +CKKGDLHKAARI  EMV+DGC+P    W+ ++ GFW
Sbjct: 402 RGISIDAGTFDSLVKCFCKKGDLHKAARIFDEMVLDGCVPDHGIWSAVVGGFW 454