BLASTX nr result

ID: Bupleurum21_contig00028651 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00028651
         (443 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002273352.1| PREDICTED: protein canopy homolog 1 [Vitis v...   110   9e-23
emb|CAN72605.1| hypothetical protein VITISV_021336 [Vitis vinifera]   110   9e-23
ref|XP_002306987.1| predicted protein [Populus trichocarpa] gi|2...   105   5e-21
ref|XP_002510701.1| conserved hypothetical protein [Ricinus comm...   103   1e-20
ref|XP_004145555.1| PREDICTED: protein canopy homolog 1-like [Cu...   100   1e-19

>ref|XP_002273352.1| PREDICTED: protein canopy homolog 1 [Vitis vinifera]
           gi|297745574|emb|CBI40739.3| unnamed protein product
           [Vitis vinifera]
          Length = 187

 Score =  110 bits (276), Expect = 9e-23
 Identities = 51/62 (82%), Positives = 56/62 (90%)
 Frame = +1

Query: 1   RVSELRVVELLDGLCDKMQDYTLEKINSTTQVWIKVGDWDTLAANKQEARAYSKDISSYC 180
           RVSELRVVELLDGLC+KMQDYTLEKI+ST + W+KV DWD +  NKQEARAYSKDISSYC
Sbjct: 68  RVSELRVVELLDGLCEKMQDYTLEKIDSTRREWVKVDDWDNITTNKQEARAYSKDISSYC 127

Query: 181 GR 186
           GR
Sbjct: 128 GR 129



 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 24/30 (80%), Positives = 28/30 (93%)
 Frame = +3

Query: 339 DEFAELIKKGSVQVGDVSKVLCQDLSKHCN 428
           DE A+LIKKGSV+ G+VSKVLCQDLSKHC+
Sbjct: 136 DELADLIKKGSVKTGEVSKVLCQDLSKHCS 165


>emb|CAN72605.1| hypothetical protein VITISV_021336 [Vitis vinifera]
          Length = 200

 Score =  110 bits (276), Expect = 9e-23
 Identities = 51/62 (82%), Positives = 56/62 (90%)
 Frame = +1

Query: 1   RVSELRVVELLDGLCDKMQDYTLEKINSTTQVWIKVGDWDTLAANKQEARAYSKDISSYC 180
           RVSELRVVELLDGLC+KMQDYTLEKI+ST + W+KV DWD +  NKQEARAYSKDISSYC
Sbjct: 81  RVSELRVVELLDGLCEKMQDYTLEKIDSTRREWVKVDDWDNITTNKQEARAYSKDISSYC 140

Query: 181 GR 186
           GR
Sbjct: 141 GR 142



 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 26/34 (76%), Positives = 30/34 (88%)
 Frame = +3

Query: 339 DEFAELIKKGSVQVGDVSKVLCQDLSKHCNRESS 440
           DE A+LIKKGSV+ G+VSKVLCQDLSKHC+  SS
Sbjct: 149 DELADLIKKGSVKTGEVSKVLCQDLSKHCSVTSS 182


>ref|XP_002306987.1| predicted protein [Populus trichocarpa] gi|222856436|gb|EEE93983.1|
           predicted protein [Populus trichocarpa]
          Length = 186

 Score =  105 bits (261), Expect = 5e-21
 Identities = 48/62 (77%), Positives = 54/62 (87%)
 Frame = +1

Query: 1   RVSELRVVELLDGLCDKMQDYTLEKINSTTQVWIKVGDWDTLAANKQEARAYSKDISSYC 180
           RVSELRVVELLDGLCDKMQDYTL+K++S    W++V  WD LA NKQEA+AYSKDISSYC
Sbjct: 70  RVSELRVVELLDGLCDKMQDYTLQKVDSKRYEWVRVDSWDNLAINKQEAKAYSKDISSYC 129

Query: 181 GR 186
           GR
Sbjct: 130 GR 131



 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 27/35 (77%), Positives = 30/35 (85%)
 Frame = +3

Query: 339 DEFAELIKKGSVQVGDVSKVLCQDLSKHCNRESSN 443
           DE AE IKKGSV+VGDVSK+LCQDLSKHCN  S +
Sbjct: 138 DELAERIKKGSVKVGDVSKILCQDLSKHCNMSSDS 172


>ref|XP_002510701.1| conserved hypothetical protein [Ricinus communis]
           gi|223551402|gb|EEF52888.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 187

 Score =  103 bits (258), Expect = 1e-20
 Identities = 47/62 (75%), Positives = 54/62 (87%)
 Frame = +1

Query: 1   RVSELRVVELLDGLCDKMQDYTLEKINSTTQVWIKVGDWDTLAANKQEARAYSKDISSYC 180
           RVSELRVVELLDGLCDKMQDYTL+K++ST   W+KV +WD L  NKQEARA+SK +SSYC
Sbjct: 71  RVSELRVVELLDGLCDKMQDYTLQKVDSTRSSWVKVDNWDNLTTNKQEARAFSKALSSYC 130

Query: 181 GR 186
           GR
Sbjct: 131 GR 132



 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 25/35 (71%), Positives = 28/35 (80%)
 Frame = +3

Query: 339 DEFAELIKKGSVQVGDVSKVLCQDLSKHCNRESSN 443
           DE AELIKKGSV+VG VSKVLC+DLS HC   S +
Sbjct: 139 DELAELIKKGSVKVGGVSKVLCEDLSNHCTHSSGS 173


>ref|XP_004145555.1| PREDICTED: protein canopy homolog 1-like [Cucumis sativus]
           gi|449485101|ref|XP_004157070.1| PREDICTED: protein
           canopy homolog 1-like [Cucumis sativus]
          Length = 184

 Score =  100 bits (249), Expect = 1e-19
 Identities = 49/62 (79%), Positives = 53/62 (85%)
 Frame = +1

Query: 1   RVSELRVVELLDGLCDKMQDYTLEKINSTTQVWIKVGDWDTLAANKQEARAYSKDISSYC 180
           RVSELRVVELLDGLC+KMQDYT+EK  S  Q WIKV +WD L  NKQEARAYSKDIS+YC
Sbjct: 70  RVSELRVVELLDGLCEKMQDYTIEKTGSAGQQWIKVDNWDNL-TNKQEARAYSKDISTYC 128

Query: 181 GR 186
           GR
Sbjct: 129 GR 130



 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 25/33 (75%), Positives = 28/33 (84%)
 Frame = +3

Query: 339 DEFAELIKKGSVQVGDVSKVLCQDLSKHCNRES 437
           D+ AELIKKGSV  GDVSKVLC DLSKHC++ S
Sbjct: 137 DDLAELIKKGSVSPGDVSKVLCHDLSKHCSKAS 169


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