BLASTX nr result

ID: Bupleurum21_contig00028645 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00028645
         (687 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI25448.3| unnamed protein product [Vitis vinifera]              377   e-102
ref|XP_002272996.1| PREDICTED: U-box domain-containing protein 1...   377   e-102
emb|CAN60363.1| hypothetical protein VITISV_024685 [Vitis vinifera]   376   e-102
ref|XP_002528322.1| ubiquitin-protein ligase, putative [Ricinus ...   365   3e-99
ref|XP_002311243.1| predicted protein [Populus trichocarpa] gi|2...   365   4e-99

>emb|CBI25448.3| unnamed protein product [Vitis vinifera]
          Length = 518

 Score =  377 bits (967), Expect = e-102
 Identities = 193/231 (83%), Positives = 213/231 (92%), Gaps = 3/231 (1%)
 Frame = -3

Query: 685 SQSS-LNIPDEYRCPISLDLMKDPVIIASGHTYDRTSIAQWINTGHHTCPKSGQRLIHMA 509
           SQS+ LNIPDE+RCPISLDLM+DPVI+ASGHTYDR SIAQWINTGH+TCPKSG +LIHMA
Sbjct: 105 SQSAILNIPDEFRCPISLDLMRDPVIVASGHTYDRNSIAQWINTGHNTCPKSGMKLIHMA 164

Query: 508 LIPNYALKSLIHQWCQENNITITDSTSPS--DLERSSGKRELHEKAVDHISATKTASDAV 335
           LIPNYALKSL+HQWC+ENNI + +STS S  DL RS+  R+  EKAVDHISATKTA DAV
Sbjct: 165 LIPNYALKSLVHQWCRENNIQLIESTSSSSSDLGRSNSMRKSCEKAVDHISATKTAMDAV 224

Query: 334 KMTAEFLVGKLATGSPDIQRQAAYELRLLAKSGMDNRRMIAEAGAIPFLVTLLGSHDSRI 155
           KMTAEFLVGKLATGSP+IQRQAAYELRLLAK+GMDNRR+IAEAGAIPFLVTLL SHD RI
Sbjct: 225 KMTAEFLVGKLATGSPEIQRQAAYELRLLAKTGMDNRRIIAEAGAIPFLVTLLSSHDPRI 284

Query: 154 QGNAVTALLNLSIFDNNKILIMAAGSLDSIIYVLQSGKTMEARENAAAAIY 2
           Q NAVTALLNLSIFDNNKILIMAAG++D+I+ VLQSGKTMEARENAAAAI+
Sbjct: 285 QENAVTALLNLSIFDNNKILIMAAGAIDNIVDVLQSGKTMEARENAAAAIF 335


>ref|XP_002272996.1| PREDICTED: U-box domain-containing protein 13 [Vitis vinifera]
          Length = 688

 Score =  377 bits (967), Expect = e-102
 Identities = 193/231 (83%), Positives = 213/231 (92%), Gaps = 3/231 (1%)
 Frame = -3

Query: 685 SQSS-LNIPDEYRCPISLDLMKDPVIIASGHTYDRTSIAQWINTGHHTCPKSGQRLIHMA 509
           SQS+ LNIPDE+RCPISLDLM+DPVI+ASGHTYDR SIAQWINTGH+TCPKSG +LIHMA
Sbjct: 275 SQSAILNIPDEFRCPISLDLMRDPVIVASGHTYDRNSIAQWINTGHNTCPKSGMKLIHMA 334

Query: 508 LIPNYALKSLIHQWCQENNITITDSTSPS--DLERSSGKRELHEKAVDHISATKTASDAV 335
           LIPNYALKSL+HQWC+ENNI + +STS S  DL RS+  R+  EKAVDHISATKTA DAV
Sbjct: 335 LIPNYALKSLVHQWCRENNIQLIESTSSSSSDLGRSNSMRKSCEKAVDHISATKTAMDAV 394

Query: 334 KMTAEFLVGKLATGSPDIQRQAAYELRLLAKSGMDNRRMIAEAGAIPFLVTLLGSHDSRI 155
           KMTAEFLVGKLATGSP+IQRQAAYELRLLAK+GMDNRR+IAEAGAIPFLVTLL SHD RI
Sbjct: 395 KMTAEFLVGKLATGSPEIQRQAAYELRLLAKTGMDNRRIIAEAGAIPFLVTLLSSHDPRI 454

Query: 154 QGNAVTALLNLSIFDNNKILIMAAGSLDSIIYVLQSGKTMEARENAAAAIY 2
           Q NAVTALLNLSIFDNNKILIMAAG++D+I+ VLQSGKTMEARENAAAAI+
Sbjct: 455 QENAVTALLNLSIFDNNKILIMAAGAIDNIVDVLQSGKTMEARENAAAAIF 505


>emb|CAN60363.1| hypothetical protein VITISV_024685 [Vitis vinifera]
          Length = 668

 Score =  376 bits (965), Expect = e-102
 Identities = 192/231 (83%), Positives = 213/231 (92%), Gaps = 3/231 (1%)
 Frame = -3

Query: 685 SQSS-LNIPDEYRCPISLDLMKDPVIIASGHTYDRTSIAQWINTGHHTCPKSGQRLIHMA 509
           SQS+ LNIPDE+RCPISLDLM+DPVI+ASGHTYDR SIAQWI+TGH+TCPKSG +LIHMA
Sbjct: 275 SQSAILNIPDEFRCPISLDLMRDPVIVASGHTYDRNSIAQWIBTGHNTCPKSGMKLIHMA 334

Query: 508 LIPNYALKSLIHQWCQENNITITDSTSPS--DLERSSGKRELHEKAVDHISATKTASDAV 335
           LIPNYALKSL+HQWC+ENNI + +STS S  DL RS+  R+  EKAVDHISATKTA DAV
Sbjct: 335 LIPNYALKSLVHQWCRENNIQLIESTSSSSSDLGRSNSMRKSCEKAVDHISATKTAMDAV 394

Query: 334 KMTAEFLVGKLATGSPDIQRQAAYELRLLAKSGMDNRRMIAEAGAIPFLVTLLGSHDSRI 155
           KMTAEFLVGKLATGSP+IQRQAAYELRLLAK+GMDNRR+IAEAGAIPFLVTLL SHD RI
Sbjct: 395 KMTAEFLVGKLATGSPEIQRQAAYELRLLAKTGMDNRRIIAEAGAIPFLVTLLSSHDPRI 454

Query: 154 QGNAVTALLNLSIFDNNKILIMAAGSLDSIIYVLQSGKTMEARENAAAAIY 2
           Q NAVTALLNLSIFDNNKILIMAAG++D+I+ VLQSGKTMEARENAAAAI+
Sbjct: 455 QENAVTALLNLSIFDNNKILIMAAGAIDNIVDVLQSGKTMEARENAAAAIF 505


>ref|XP_002528322.1| ubiquitin-protein ligase, putative [Ricinus communis]
           gi|223532277|gb|EEF34080.1| ubiquitin-protein ligase,
           putative [Ricinus communis]
          Length = 695

 Score =  365 bits (938), Expect = 3e-99
 Identities = 182/227 (80%), Positives = 205/227 (90%), Gaps = 3/227 (1%)
 Frame = -3

Query: 673 LNIPDEYRCPISLDLMKDPVIIASGHTYDRTSIAQWINTGHHTCPKSGQRLIHMALIPNY 494
           LN+PDE+RCPISLDLMKDPVI+ASGHTYDR SIAQWIN G+HTCPKSGQRLIHMALIPNY
Sbjct: 286 LNVPDEFRCPISLDLMKDPVIVASGHTYDRNSIAQWINEGYHTCPKSGQRLIHMALIPNY 345

Query: 493 ALKSLIHQWCQENNITITD---STSPSDLERSSGKRELHEKAVDHISATKTASDAVKMTA 323
           ALKSL+HQWCQ+NNI + D   S++   L RS  K++++++AVDHISATK ASDAVKMTA
Sbjct: 346 ALKSLVHQWCQDNNIPLVDYSYSSTTDQLGRSDSKKKIYDRAVDHISATKAASDAVKMTA 405

Query: 322 EFLVGKLATGSPDIQRQAAYELRLLAKSGMDNRRMIAEAGAIPFLVTLLGSHDSRIQGNA 143
           EFLVGKLA GSP+IQRQAAYELRLLAK+GMDNRR+IAEAGAIPFLV LL S D RIQ NA
Sbjct: 406 EFLVGKLAMGSPEIQRQAAYELRLLAKTGMDNRRIIAEAGAIPFLVILLSSKDPRIQENA 465

Query: 142 VTALLNLSIFDNNKILIMAAGSLDSIIYVLQSGKTMEARENAAAAIY 2
           VTALLNLSIFDNNKILIMAAG++DSI+ VL+SG TMEARENAAAAI+
Sbjct: 466 VTALLNLSIFDNNKILIMAAGAIDSIVNVLESGNTMEARENAAAAIF 512


>ref|XP_002311243.1| predicted protein [Populus trichocarpa] gi|222851063|gb|EEE88610.1|
           predicted protein [Populus trichocarpa]
          Length = 688

 Score =  365 bits (937), Expect = 4e-99
 Identities = 186/231 (80%), Positives = 208/231 (90%), Gaps = 3/231 (1%)
 Frame = -3

Query: 685 SQSSL-NIPDEYRCPISLDLMKDPVIIASGHTYDRTSIAQWINTGHHTCPKSGQRLIHMA 509
           SQS L NIPDE+RCPISLDLMKDPVI+ASGHTYDR SIAQWIN+GHHTCPKSG+RLIH +
Sbjct: 275 SQSILPNIPDEFRCPISLDLMKDPVIVASGHTYDRNSIAQWINSGHHTCPKSGKRLIHTS 334

Query: 508 LIPNYALKSLIHQWCQENNITITDST--SPSDLERSSGKRELHEKAVDHISATKTASDAV 335
           LIPNYALKSL+HQWCQ+NN+ + +++  S S  ERSS K +L EKA++HISATK A DAV
Sbjct: 335 LIPNYALKSLVHQWCQDNNVPLIENSTSSSSKFERSSSKSKLSEKAIEHISATKAAMDAV 394

Query: 334 KMTAEFLVGKLATGSPDIQRQAAYELRLLAKSGMDNRRMIAEAGAIPFLVTLLGSHDSRI 155
           KMTAEFLVGKLA GSP+IQRQAAYELRLLAK+GMDNR++IAEAGAIPFLVTLL S D RI
Sbjct: 395 KMTAEFLVGKLAMGSPEIQRQAAYELRLLAKTGMDNRKIIAEAGAIPFLVTLLSSTDPRI 454

Query: 154 QGNAVTALLNLSIFDNNKILIMAAGSLDSIIYVLQSGKTMEARENAAAAIY 2
           Q NAVTALLNLSIFDNNKILIMAAGS+DSII VL+SGKTMEARENAAA I+
Sbjct: 455 QENAVTALLNLSIFDNNKILIMAAGSIDSIINVLESGKTMEARENAAATIF 505


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