BLASTX nr result

ID: Bupleurum21_contig00028641 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00028641
         (1048 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003522297.1| PREDICTED: uncharacterized protein LOC100796...    87   7e-15
ref|XP_002514661.1| conserved hypothetical protein [Ricinus comm...    84   4e-14
ref|XP_002442853.1| hypothetical protein SORBIDRAFT_08g003860 [S...    84   6e-14
ref|XP_003598953.1| PHD-finger family protein expressed [Medicag...    80   1e-12
gb|ACR35079.1| unknown [Zea mays] gi|413916195|gb|AFW56127.1| hy...    77   5e-12

>ref|XP_003522297.1| PREDICTED: uncharacterized protein LOC100796899 [Glycine max]
          Length = 649

 Score = 87.0 bits (214), Expect = 7e-15
 Identities = 69/215 (32%), Positives = 107/215 (49%), Gaps = 15/215 (6%)
 Frame = +2

Query: 437  PAPIASWLGTFFIKDEKTTISFRAYPTAQGLP------KVKDFSEKMPTLLEFELMSYDD 598
            P+   +W G F I   +T +S   Y   +  P      K   FS +MP++L+ E +   +
Sbjct: 439  PSSFPAWRGQFQIL--QTAVSSEFYDGLEAQPPCIVNKKAYKFSTEMPSVLQLESLPVLN 496

Query: 599  FLRTVFKGDDPNEEDIGLYFFPDNM-----KRLESYISHLEQLYGQVVLRSCIGEVDLLV 763
             L  +F+ + P  +DI LYFFP  +     K L+S +  L     + +LRS I  V+LLV
Sbjct: 497  ALTDIFQDNSPRLQDIALYFFPSELTERSRKNLDSILKFLNA--EKSMLRSYINGVELLV 554

Query: 764  FTSKVLHRDYR----KWNKHDFLWGLYRHKRRHQKLDCAVEEKVHEDNVIDMEVDMMGGV 931
            FTS  L  D +      N   FLWG++R K    K+D A+ E+V +   +DM++DM+GG 
Sbjct: 555  FTSNQLDMDSKGAIAAVNAGHFLWGMFRQK----KIDKAI-ERVPDMEPVDMDIDMIGGK 609

Query: 932  AVGRLEIVIPRQSLKTSNEMFGAEAAADSKTDIPP 1036
             V     V+     K+++ M        +K D+PP
Sbjct: 610  DVVERADVVRNCKPKSASLM-----EDYNKLDVPP 639


>ref|XP_002514661.1| conserved hypothetical protein [Ricinus communis]
            gi|223546265|gb|EEF47767.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 565

 Score = 84.3 bits (207), Expect = 4e-14
 Identities = 92/326 (28%), Positives = 152/326 (46%), Gaps = 24/326 (7%)
 Frame = +2

Query: 14   KEMKDILAPTKEHGQIRQISPVQDIEVSHAKKQKGMGETLSASQISRHSKTC--DIAQTD 187
            +++K I+ P KEH      +   +  VS AK+     + +++ + ++  KTC  D    +
Sbjct: 173  EDLKAIINPVKEHCWKDTDTLATEYNVSPAKRSCFKEQKITSIKPAKEVKTCNFDGLAKE 232

Query: 188  ATLSPANALTSTGDT------EKTNSELPKKVSREECAALLAVYCQPAYRLGFKPTKNPE 349
               S +N +     T      E  NS L    S      ++         +      + +
Sbjct: 233  EKRSSSNLIAKEVKTCNMNAQEAVNSSL---ASAHHLPPIITACMDIKNAVKITRCSSLD 289

Query: 350  PKNSEAENVVHTVKNIFQKAAAEETL--PTDPAPIASWLGTF-FI---KDEKTTISFRAY 511
               S++  VV + K   +       L  P  PA   +W G F FI   K  K    F+A 
Sbjct: 290  LCWSDSFPVVESKKPDVEGRDPNLCLYHPFFPALNVTWKGGFKFIDTAKPGKFYGGFQAQ 349

Query: 512  PTAQGLPKVKDFSEKMPTLLEFELMSYDDFLRTVFKGDDPNEEDIGLYFFP-DNMKRL-E 685
            P ++   +  + ++KMP +L+ EL+    +   VF+ D P+  DI LYFFP +N +R  +
Sbjct: 350  PPSRVSRRAYELAQKMPIVLQIELLPRHVWA-DVFQKDYPDFRDIALYFFPSENTERSKD 408

Query: 686  SYISHLEQLYGQV-VLRSCIGEVDLLVFTSKVLHRD----YRKWNKHDFLWGLYRHKRRH 850
            ++ S  + +  Q  VLR+ I +V+LL+FTSK LHRD      +     F+WG++R  +R 
Sbjct: 409  NHASFFKLMEIQSSVLRTYISDVELLIFTSKQLHRDSQDVIERSGMEHFIWGVFRRAKRD 468

Query: 851  Q---KLDCAVEEKVHEDNVIDMEVDM 919
            Q   +LDCA        +V+DME+DM
Sbjct: 469  QFPPELDCA---STGCSDVLDMEIDM 491


>ref|XP_002442853.1| hypothetical protein SORBIDRAFT_08g003860 [Sorghum bicolor]
            gi|241943546|gb|EES16691.1| hypothetical protein
            SORBIDRAFT_08g003860 [Sorghum bicolor]
          Length = 777

 Score = 84.0 bits (206), Expect = 6e-14
 Identities = 71/300 (23%), Positives = 142/300 (47%), Gaps = 18/300 (6%)
 Frame = +2

Query: 149  SRHSKTCDIAQTDATLSPANALTSTGDTEKTNSELP--KKVSREECAALLA---VYCQPA 313
            S+H  +C+  +T+  L   N + S G   K N  +   K+   EE A+      + C+P 
Sbjct: 348  SKHDLSCEYRETNLKLP--NRVQSVGGNGKNNDVISRRKRPLLEEKASTHVQKDLTCRPM 405

Query: 314  YRLGFKPTKNPEPKNSEAENVVHTVKNIFQKAAAEETLP-----------TDPAPIASWL 460
             R  +      E  N   +++VH ++++  +  A+ ++            + P  I  W 
Sbjct: 406  KRRRYIEANEDEEGNVGDQHLVH-IEDVTTELTAQASISKHCVERQCNCCSKPIDIPRWS 464

Query: 461  GTFFIKDEKTTISFRAYPTAQGLPKVKDFSEKMPTLLEFELMSYDDFLRTVFKGDDPNEE 640
            G F I D K  IS   + +++   KV   S  +P +++   +        +FK   P  +
Sbjct: 465  GLFKI-DGKEYISLAGHLSSKSCEKVWKLSS-LPKVVQVTKVPRMAAWPKIFKASKPTGD 522

Query: 641  DIGLYFFPDNMKRLESYISHL--EQLYGQVVLRSCIGEVDLLVFTSKVLHRDYRKWNKHD 814
            +IGLYFFP  M RL+  +  L  E +   ++L++ IGE ++L+F S +L   Y+ + + +
Sbjct: 523  NIGLYFFPPEM-RLDEELDQLINEVMDKDLILQAVIGEAEMLIFPSVLLPERYQTFRRKN 581

Query: 815  FLWGLYRHKRRHQKLDCAVEEKVHEDNVIDMEVDMMGGVAVGRLEIVIPRQSLKTSNEMF 994
            +LW  +  K +  K+D  VE++  ++  +  ++D +      + E+++ + ++   N+ F
Sbjct: 582  YLWAAF--KAKEDKVDVIVEQEDEKEKYVSNQLDEVQSEEPDQ-EMILMKSAMFLENQQF 638


>ref|XP_003598953.1| PHD-finger family protein expressed [Medicago truncatula]
           gi|355488001|gb|AES69204.1| PHD-finger family protein
           expressed [Medicago truncatula]
          Length = 560

 Score = 79.7 bits (195), Expect = 1e-12
 Identities = 62/214 (28%), Positives = 103/214 (48%), Gaps = 29/214 (13%)
 Frame = +2

Query: 437 PAPIASWLGTFFIKDEKTT----ISFRAYPTAQGLPKVKDFSEKMPTLLEFELMSYDDFL 604
           P+ I +W G F I+ E  +      F A P      K  + S K+P++L+ E +   + L
Sbjct: 272 PSSIRAWSGQFQIRQEAASGGIYDGFEAQPPCTINRKAYNLSSKIPSVLQLESLPALNVL 331

Query: 605 RTVFKGDDPNEEDIGLYFFPDNMKRLESYISHLEQLYGQVV------------------- 727
              F+   P+ +DI LYFFP +     ++ S+++ L   V+                   
Sbjct: 332 TDEFQNYSPSLQDIALYFFPSDNNERSAFASYVDTLSSVVICDKSRKNLNNLLKFMNDEN 391

Query: 728 --LRSCIGEVDLLVFTSKVLHRDYRKW----NKHDFLWGLYRHKRRHQKLDCAVEEKVHE 889
             LRS I  V+L +FTS  L  D R      ++  FLWG++R K+     +    +    
Sbjct: 392 LMLRSLINGVELFLFTSHKLSDDSRGTIAVVHEGYFLWGVFRTKKSVTANERLPPDMDPI 451

Query: 890 DNVIDMEVDMMGGVAVGRLEIVIPRQSLKTSNEM 991
           D+  DM++DMMGG  VGR++ V+   +LK+S+++
Sbjct: 452 DD--DMDIDMMGGNDVGRIDNVL-NHNLKSSSQL 482


>gb|ACR35079.1| unknown [Zea mays] gi|413916195|gb|AFW56127.1| hypothetical protein
           ZEAMMB73_505831 [Zea mays]
          Length = 669

 Score = 77.4 bits (189), Expect = 5e-12
 Identities = 52/165 (31%), Positives = 84/165 (50%), Gaps = 5/165 (3%)
 Frame = +2

Query: 437 PAPIASWLGTFFIKDEKTTISFRAYPTAQGLPKVKDFSEKMPTLLEFELMSYDDFLRTVF 616
           P  I  W GTF I D K  IS   + +++   KV   S  +P +++   +        +F
Sbjct: 442 PIDIPRWSGTFKI-DGKEHISLAGHLSSKSCEKVWKLSS-LPKVVQVTKVPRMAVWPKIF 499

Query: 617 KGDDPNEEDIGLYFFPDNMKRLESYISHLEQLYGQV-----VLRSCIGEVDLLVFTSKVL 781
           K  +P+ ++IGLYFFP  M+  E     L+QL  +V     +LR+ IGE ++L+F S +L
Sbjct: 500 KASEPSGDNIGLYFFPPEMRHDEE----LDQLVNEVMDKDLILRAIIGEAEMLIFPSVLL 555

Query: 782 HRDYRKWNKHDFLWGLYRHKRRHQKLDCAVEEKVHEDNVIDMEVD 916
              Y+ +    +LW  +  K +  K D  VEE+V + N +  + D
Sbjct: 556 PERYQTFQTKHYLWAAF--KAKEDKGDAIVEEEVEKGNCVSNQPD 598


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