BLASTX nr result

ID: Bupleurum21_contig00028639 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00028639
         (1415 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002527439.1| DNA repair helicase rad5,16, putative [Ricin...   572   e-160
ref|XP_003551078.1| PREDICTED: putative SWI/SNF-related matrix-a...   571   e-160
ref|XP_003632276.1| PREDICTED: putative SWI/SNF-related matrix-a...   569   e-160
emb|CBI17093.3| unnamed protein product [Vitis vinifera]              569   e-160
ref|XP_002270098.1| PREDICTED: putative SWI/SNF-related matrix-a...   569   e-160

>ref|XP_002527439.1| DNA repair helicase rad5,16, putative [Ricinus communis]
            gi|223533174|gb|EEF34931.1| DNA repair helicase rad5,16,
            putative [Ricinus communis]
          Length = 1028

 Score =  572 bits (1473), Expect = e-160
 Identities = 283/322 (87%), Positives = 306/322 (95%)
 Frame = -3

Query: 1413 QFVEQGRVLHNYASILELLLRLRQCCDHPFLVMSRGDTQEFSDLNKLAKRFLKGGSDVME 1234
            QFVEQGRVLHNYASILELLLRLRQCCDHPFLVMSRGDTQE+SDLNKLAKRFLKGG +++E
Sbjct: 707  QFVEQGRVLHNYASILELLLRLRQCCDHPFLVMSRGDTQEYSDLNKLAKRFLKGGQNMLE 766

Query: 1233 GEAKDVPSRAYVQEVVEELRKGEEGECPICLEVFEDAVLTPCAHRLCRECLLASWPSHTS 1054
            GEA+DVPSRAYV+EVVEELRKG++GECPICLE FEDAVLT CAHRLCRECLLASW + TS
Sbjct: 767  GEARDVPSRAYVEEVVEELRKGDQGECPICLEAFEDAVLTLCAHRLCRECLLASWRNSTS 826

Query: 1053 GLCPVCRKNVSRHDLITAPTASRFQIDIEKNWVESSKVSILLKELENLRSSGSKSIIFSQ 874
            GLCPVCRK V+R +LITAPT SRFQIDIEKNWVESSKV +LL+ELENLRSSGSKSI+FSQ
Sbjct: 827  GLCPVCRKIVTRQELITAPTDSRFQIDIEKNWVESSKVIVLLQELENLRSSGSKSILFSQ 886

Query: 873  WTAFLDLLQIPLSRSNFAFLRLDGTLNQQQREKVLKQFSEDSNILVLLMSLKAGGVGINL 694
            WTAFLDLLQIPLSRS  +++RLDGTLNQQQRE+V+KQFSED +ILVLLMSLKAGGVGINL
Sbjct: 887  WTAFLDLLQIPLSRSGISYVRLDGTLNQQQRERVIKQFSEDDSILVLLMSLKAGGVGINL 946

Query: 693  TAASNAFVMDPWWNPAVEEQAVMRIHRIGQTNTVSIRRFIVKGTVEERMEAVQARKQRMI 514
            TAASNAFVMDPWWNPAVEEQAVMRIHRIGQT  V I+RFIVKGTVEERMEAVQARKQRM+
Sbjct: 947  TAASNAFVMDPWWNPAVEEQAVMRIHRIGQTKPVMIKRFIVKGTVEERMEAVQARKQRMV 1006

Query: 513  SGALTDHEVRSARIEELKMLFT 448
            SGALTD EVR+ARIEELKMLFT
Sbjct: 1007 SGALTDQEVRTARIEELKMLFT 1028


>ref|XP_003551078.1| PREDICTED: putative SWI/SNF-related matrix-associated actin-dependent
            regulator of chromatin subfamily A member 3-like 2-like
            [Glycine max]
          Length = 1009

 Score =  571 bits (1471), Expect = e-160
 Identities = 283/322 (87%), Positives = 301/322 (93%)
 Frame = -3

Query: 1413 QFVEQGRVLHNYASILELLLRLRQCCDHPFLVMSRGDTQEFSDLNKLAKRFLKGGSDVME 1234
            QFVEQGRVLHNYASILELLLRLRQCCDHPFLVMSRGDTQEF+DLNKLAKRFL+G     E
Sbjct: 688  QFVEQGRVLHNYASILELLLRLRQCCDHPFLVMSRGDTQEFADLNKLAKRFLRGTYTASE 747

Query: 1233 GEAKDVPSRAYVQEVVEELRKGEEGECPICLEVFEDAVLTPCAHRLCRECLLASWPSHTS 1054
            GE KD PSRAYVQEVVEELRKGE+GECPICLEVFEDAVLTPCAHRLCRECLL+SW + TS
Sbjct: 748  GEVKDTPSRAYVQEVVEELRKGEQGECPICLEVFEDAVLTPCAHRLCRECLLSSWRNATS 807

Query: 1053 GLCPVCRKNVSRHDLITAPTASRFQIDIEKNWVESSKVSILLKELENLRSSGSKSIIFSQ 874
            GLCPVCRK +SR DLITAPT +RFQ+DIEKNWVES KV++LL ELENLRSSGSKSI+FSQ
Sbjct: 808  GLCPVCRKTISRLDLITAPTENRFQVDIEKNWVESCKVTVLLNELENLRSSGSKSIVFSQ 867

Query: 873  WTAFLDLLQIPLSRSNFAFLRLDGTLNQQQREKVLKQFSEDSNILVLLMSLKAGGVGINL 694
            WTAFLDLLQIP +R+N +F+RLDGTLN QQREKV+KQFSEDSN LVLLMSLKAGGVGINL
Sbjct: 868  WTAFLDLLQIPFTRNNISFVRLDGTLNLQQREKVIKQFSEDSNTLVLLMSLKAGGVGINL 927

Query: 693  TAASNAFVMDPWWNPAVEEQAVMRIHRIGQTNTVSIRRFIVKGTVEERMEAVQARKQRMI 514
            TAASNAFVMDPWWNPAVEEQAVMRIHRIGQT  V+IRRFIVKGTVEERMEAVQARKQRMI
Sbjct: 928  TAASNAFVMDPWWNPAVEEQAVMRIHRIGQTKKVAIRRFIVKGTVEERMEAVQARKQRMI 987

Query: 513  SGALTDHEVRSARIEELKMLFT 448
            SGALTD EVR+ARIEELKMLFT
Sbjct: 988  SGALTDQEVRTARIEELKMLFT 1009


>ref|XP_003632276.1| PREDICTED: putative SWI/SNF-related matrix-associated actin-dependent
            regulator of chromatin subfamily A member 3-like 2-like
            [Vitis vinifera]
          Length = 1029

 Score =  569 bits (1467), Expect = e-160
 Identities = 283/322 (87%), Positives = 300/322 (93%)
 Frame = -3

Query: 1413 QFVEQGRVLHNYASILELLLRLRQCCDHPFLVMSRGDTQEFSDLNKLAKRFLKGGSDVME 1234
            QFVEQGRVLHNYASILELLL LRQCCDHPFLVMSRGDTQEFSDLNKLAK FLKGG + +E
Sbjct: 708  QFVEQGRVLHNYASILELLLCLRQCCDHPFLVMSRGDTQEFSDLNKLAKHFLKGGQNALE 767

Query: 1233 GEAKDVPSRAYVQEVVEELRKGEEGECPICLEVFEDAVLTPCAHRLCRECLLASWPSHTS 1054
            GE KD+PSRAY+QEVVEELRKGE+GECPICLE FEDAVLTPCAHRLCRECLLASW + TS
Sbjct: 768  GETKDLPSRAYIQEVVEELRKGEQGECPICLEAFEDAVLTPCAHRLCRECLLASWRNPTS 827

Query: 1053 GLCPVCRKNVSRHDLITAPTASRFQIDIEKNWVESSKVSILLKELENLRSSGSKSIIFSQ 874
            G CPVCRK +SR DLITAPT SRFQID+EKNW+ESSKV+ LL ELENL S GSKSI+FSQ
Sbjct: 828  GFCPVCRKTISRQDLITAPTGSRFQIDVEKNWMESSKVAALLLELENLCSVGSKSILFSQ 887

Query: 873  WTAFLDLLQIPLSRSNFAFLRLDGTLNQQQREKVLKQFSEDSNILVLLMSLKAGGVGINL 694
            WTAFLDLLQIPLSRSN +F+RLDGTLNQQQREKV+KQFSE+SNILVLLMSLKAGGVGINL
Sbjct: 888  WTAFLDLLQIPLSRSNISFVRLDGTLNQQQREKVIKQFSEESNILVLLMSLKAGGVGINL 947

Query: 693  TAASNAFVMDPWWNPAVEEQAVMRIHRIGQTNTVSIRRFIVKGTVEERMEAVQARKQRMI 514
            TAASNAFV+DPWWNPAVEEQAVMRIHRIGQT  V I+RFIVKGTVEERM AVQARKQRMI
Sbjct: 948  TAASNAFVLDPWWNPAVEEQAVMRIHRIGQTKRVMIKRFIVKGTVEERMLAVQARKQRMI 1007

Query: 513  SGALTDHEVRSARIEELKMLFT 448
            SGALTD EVRSARIEELKMLFT
Sbjct: 1008 SGALTDQEVRSARIEELKMLFT 1029


>emb|CBI17093.3| unnamed protein product [Vitis vinifera]
          Length = 1025

 Score =  569 bits (1467), Expect = e-160
 Identities = 283/322 (87%), Positives = 300/322 (93%)
 Frame = -3

Query: 1413 QFVEQGRVLHNYASILELLLRLRQCCDHPFLVMSRGDTQEFSDLNKLAKRFLKGGSDVME 1234
            QFVEQGRVLHNYASILELLL LRQCCDHPFLVMSRGDTQEFSDLNKLAK FLKGG + +E
Sbjct: 704  QFVEQGRVLHNYASILELLLCLRQCCDHPFLVMSRGDTQEFSDLNKLAKHFLKGGQNALE 763

Query: 1233 GEAKDVPSRAYVQEVVEELRKGEEGECPICLEVFEDAVLTPCAHRLCRECLLASWPSHTS 1054
            GE KD+PSRAY+QEVVEELRKGE+GECPICLE FEDAVLTPCAHRLCRECLLASW + TS
Sbjct: 764  GETKDLPSRAYIQEVVEELRKGEQGECPICLEAFEDAVLTPCAHRLCRECLLASWRNPTS 823

Query: 1053 GLCPVCRKNVSRHDLITAPTASRFQIDIEKNWVESSKVSILLKELENLRSSGSKSIIFSQ 874
            G CPVCRK +SR DLITAPT SRFQID+EKNW+ESSKV+ LL ELENL S GSKSI+FSQ
Sbjct: 824  GFCPVCRKTISRQDLITAPTGSRFQIDVEKNWMESSKVAALLLELENLCSVGSKSILFSQ 883

Query: 873  WTAFLDLLQIPLSRSNFAFLRLDGTLNQQQREKVLKQFSEDSNILVLLMSLKAGGVGINL 694
            WTAFLDLLQIPLSRSN +F+RLDGTLNQQQREKV+KQFSE+SNILVLLMSLKAGGVGINL
Sbjct: 884  WTAFLDLLQIPLSRSNISFVRLDGTLNQQQREKVIKQFSEESNILVLLMSLKAGGVGINL 943

Query: 693  TAASNAFVMDPWWNPAVEEQAVMRIHRIGQTNTVSIRRFIVKGTVEERMEAVQARKQRMI 514
            TAASNAFV+DPWWNPAVEEQAVMRIHRIGQT  V I+RFIVKGTVEERM AVQARKQRMI
Sbjct: 944  TAASNAFVLDPWWNPAVEEQAVMRIHRIGQTKRVMIKRFIVKGTVEERMLAVQARKQRMI 1003

Query: 513  SGALTDHEVRSARIEELKMLFT 448
            SGALTD EVRSARIEELKMLFT
Sbjct: 1004 SGALTDQEVRSARIEELKMLFT 1025


>ref|XP_002270098.1| PREDICTED: putative SWI/SNF-related matrix-associated actin-dependent
            regulator of chromatin subfamily A member 3-like 2-like
            isoform 2 [Vitis vinifera]
          Length = 1016

 Score =  569 bits (1467), Expect = e-160
 Identities = 283/322 (87%), Positives = 300/322 (93%)
 Frame = -3

Query: 1413 QFVEQGRVLHNYASILELLLRLRQCCDHPFLVMSRGDTQEFSDLNKLAKRFLKGGSDVME 1234
            QFVEQGRVLHNYASILELLL LRQCCDHPFLVMSRGDTQEFSDLNKLAK FLKGG + +E
Sbjct: 695  QFVEQGRVLHNYASILELLLCLRQCCDHPFLVMSRGDTQEFSDLNKLAKHFLKGGQNALE 754

Query: 1233 GEAKDVPSRAYVQEVVEELRKGEEGECPICLEVFEDAVLTPCAHRLCRECLLASWPSHTS 1054
            GE KD+PSRAY+QEVVEELRKGE+GECPICLE FEDAVLTPCAHRLCRECLLASW + TS
Sbjct: 755  GETKDLPSRAYIQEVVEELRKGEQGECPICLEAFEDAVLTPCAHRLCRECLLASWRNPTS 814

Query: 1053 GLCPVCRKNVSRHDLITAPTASRFQIDIEKNWVESSKVSILLKELENLRSSGSKSIIFSQ 874
            G CPVCRK +SR DLITAPT SRFQID+EKNW+ESSKV+ LL ELENL S GSKSI+FSQ
Sbjct: 815  GFCPVCRKTISRQDLITAPTGSRFQIDVEKNWMESSKVAALLLELENLCSVGSKSILFSQ 874

Query: 873  WTAFLDLLQIPLSRSNFAFLRLDGTLNQQQREKVLKQFSEDSNILVLLMSLKAGGVGINL 694
            WTAFLDLLQIPLSRSN +F+RLDGTLNQQQREKV+KQFSE+SNILVLLMSLKAGGVGINL
Sbjct: 875  WTAFLDLLQIPLSRSNISFVRLDGTLNQQQREKVIKQFSEESNILVLLMSLKAGGVGINL 934

Query: 693  TAASNAFVMDPWWNPAVEEQAVMRIHRIGQTNTVSIRRFIVKGTVEERMEAVQARKQRMI 514
            TAASNAFV+DPWWNPAVEEQAVMRIHRIGQT  V I+RFIVKGTVEERM AVQARKQRMI
Sbjct: 935  TAASNAFVLDPWWNPAVEEQAVMRIHRIGQTKRVMIKRFIVKGTVEERMLAVQARKQRMI 994

Query: 513  SGALTDHEVRSARIEELKMLFT 448
            SGALTD EVRSARIEELKMLFT
Sbjct: 995  SGALTDQEVRSARIEELKMLFT 1016


Top