BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00028635
         (567 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002310039.1| predicted protein [Populus trichocarpa] gi|2...   251   4e-65
ref|XP_004150840.1| PREDICTED: putative pentatricopeptide repeat...   250   1e-64
ref|XP_004163923.1| PREDICTED: putative pentatricopeptide repeat...   250   1e-64
ref|XP_003591356.1| Pentatricopeptide repeat-containing protein ...   246   1e-63
ref|XP_002279193.1| PREDICTED: putative pentatricopeptide repeat...   241   5e-62

>ref|XP_002310039.1| predicted protein [Populus trichocarpa] gi|222852942|gb|EEE90489.1|
           predicted protein [Populus trichocarpa]
          Length = 507

 Score =  251 bits (642), Expect = 4e-65
 Identities = 123/180 (68%), Positives = 149/180 (82%), Gaps = 2/180 (1%)
 Frame = -3

Query: 538 TLNTDQSSINYDDIQT--VYNIICNSTTTTDMKESLKSSQIFLSNDLIDSVLKKARFSHS 365
           +L+T+  + N  DIQ   +YNII NST++ ++K+SLKS+ +FLSNDLID VLK+ RFSH 
Sbjct: 28  SLHTNPQNHNNKDIQVDAIYNIISNSTSSQNLKQSLKSTGVFLSNDLIDKVLKRVRFSHG 87

Query: 364 NPKNTLDFFNLTAQRRGFYHTCYSLDTMLYILGRNRRFNEIWDVLKDIKRKDRSLITPRT 185
           NP   LDFFN TA RRGFYH+ YSLDTMLYILGR+R+F+ IWDVL DIKRKDR+LITPRT
Sbjct: 88  NPLQALDFFNFTADRRGFYHSSYSLDTMLYILGRSRKFDHIWDVLIDIKRKDRNLITPRT 147

Query: 184 VMVVLGRVAKLCSVRYTVETFRKFRRIVPEFGIECYNGLLRTLCQEKTMTDARNVYHGLK 5
           + VVLGRVAK+CSVR TVE+F KF+R+VP F   C+N LLRTLCQEK+M+DARNVYH LK
Sbjct: 148 LQVVLGRVAKVCSVRMTVESFWKFKRLVPVFDTSCFNALLRTLCQEKSMSDARNVYHHLK 207


>ref|XP_004150840.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g02420-like [Cucumis sativus]
          Length = 495

 Score =  250 bits (639), Expect = 1e-64
 Identities = 121/186 (65%), Positives = 154/186 (82%)
 Frame = -3

Query: 562 SIPIFSPHTLNTDQSSINYDDIQTVYNIICNSTTTTDMKESLKSSQIFLSNDLIDSVLKK 383
           SI    P + +TD  S+ + +I+TV+ II  S+++TDMK SL+SS++FLSN+LID VLK+
Sbjct: 22  SIFFSHPFSSSTDNQSL-HQNIETVFRIITTSSSSTDMKHSLESSRVFLSNELIDGVLKR 80

Query: 382 ARFSHSNPKNTLDFFNLTAQRRGFYHTCYSLDTMLYILGRNRRFNEIWDVLKDIKRKDRS 203
            RFSH NP   L+FFN TA+RRGFYHT +S+DTMLYILGR+R+F++IWDVL D+K KD S
Sbjct: 81  VRFSHGNPLQALEFFNYTAKRRGFYHTSFSVDTMLYILGRSRKFDKIWDVLLDVKFKDPS 140

Query: 202 LITPRTVMVVLGRVAKLCSVRYTVETFRKFRRIVPEFGIECYNGLLRTLCQEKTMTDARN 23
           LI+ RTVMVVLGR+AK+CSVR TVE+FRKF++ VPEF + C+N LLRTLCQEK+M DARN
Sbjct: 141 LISLRTVMVVLGRIAKVCSVRQTVESFRKFKKFVPEFDVTCFNALLRTLCQEKSMMDARN 200

Query: 22  VYHGLK 5
           VYHGLK
Sbjct: 201 VYHGLK 206


>ref|XP_004163923.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g02420-like [Cucumis sativus]
          Length = 495

 Score =  250 bits (638), Expect = 1e-64
 Identities = 119/180 (66%), Positives = 152/180 (84%)
 Frame = -3

Query: 544 PHTLNTDQSSINYDDIQTVYNIICNSTTTTDMKESLKSSQIFLSNDLIDSVLKKARFSHS 365
           P + +TD  S+ + +I+TV+ II  S+++TDMK SL+SS++FLSN+LID VLK+ RFSH 
Sbjct: 28  PFSSSTDNQSL-HQNIETVFRIITTSSSSTDMKHSLESSRVFLSNELIDGVLKRVRFSHG 86

Query: 364 NPKNTLDFFNLTAQRRGFYHTCYSLDTMLYILGRNRRFNEIWDVLKDIKRKDRSLITPRT 185
           NP   L+FFN TA+RRGFYHT +S+DTMLYILGR+R+F++IWDVL D+K KD SLI+ RT
Sbjct: 87  NPLQALEFFNYTAKRRGFYHTSFSVDTMLYILGRSRKFDKIWDVLLDVKFKDPSLISLRT 146

Query: 184 VMVVLGRVAKLCSVRYTVETFRKFRRIVPEFGIECYNGLLRTLCQEKTMTDARNVYHGLK 5
           VMVVLGR+AK+CSVR TVE+FRKF++ VPEF + C+N LLRTLCQEK+M DARNVYHGLK
Sbjct: 147 VMVVLGRIAKVCSVRQTVESFRKFKKFVPEFDVTCFNALLRTLCQEKSMMDARNVYHGLK 206


>ref|XP_003591356.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355480404|gb|AES61607.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 518

 Score =  246 bits (629), Expect = 1e-63
 Identities = 111/168 (66%), Positives = 143/168 (85%)
 Frame = -3

Query: 505 DDIQTVYNIICNSTTTTDMKESLKSSQIFLSNDLIDSVLKKARFSHSNPKNTLDFFNLTA 326
           DD+  VY I+  +++   +K+SLKS+QIFLSN+LID VLK+ RF H+NP  TL+FF  T 
Sbjct: 26  DDVHKVYTILTTTSSPETLKQSLKSTQIFLSNELIDQVLKRVRFGHANPNQTLEFFRYTG 85

Query: 325 QRRGFYHTCYSLDTMLYILGRNRRFNEIWDVLKDIKRKDRSLITPRTVMVVLGRVAKLCS 146
           +R+GFYHT YSLDTMLYILGR+R F+ +W++L + +RKD+++ITPRTVMVVLGRVAK+CS
Sbjct: 86  RRKGFYHTAYSLDTMLYILGRSRMFDHVWELLIEARRKDQNVITPRTVMVVLGRVAKVCS 145

Query: 145 VRYTVETFRKFRRIVPEFGIECYNGLLRTLCQEKTMTDARNVYHGLKH 2
           VR TVETFRKF++IVP++G+ C+N LLRTLCQEK+MTDARNVYH LKH
Sbjct: 146 VRQTVETFRKFKKIVPDYGVNCFNALLRTLCQEKSMTDARNVYHSLKH 193


>ref|XP_002279193.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g02420-like [Vitis vinifera]
          Length = 526

 Score =  241 bits (616), Expect = 5e-62
 Identities = 109/174 (62%), Positives = 149/174 (85%)
 Frame = -3

Query: 523 QSSINYDDIQTVYNIICNSTTTTDMKESLKSSQIFLSNDLIDSVLKKARFSHSNPKNTLD 344
           +++++  D++TV+ I+ ++++T ++K+SLKSS +FLSNDLID VLK+ RFSH NP   L 
Sbjct: 52  ETTVDNGDVETVFRIVSSASSTRNLKQSLKSSGVFLSNDLIDKVLKRVRFSHGNPFQALA 111

Query: 343 FFNLTAQRRGFYHTCYSLDTMLYILGRNRRFNEIWDVLKDIKRKDRSLITPRTVMVVLGR 164
           FFN T +R+GFYHT +SLDTMLYILGR+RRF++IW++L D++RKD+SLI+PR+V VVLGR
Sbjct: 112 FFNYTNKRKGFYHTPFSLDTMLYILGRSRRFDQIWELLVDMRRKDQSLISPRSVQVVLGR 171

Query: 163 VAKLCSVRYTVETFRKFRRIVPEFGIECYNGLLRTLCQEKTMTDARNVYHGLKH 2
           +AK+CSV+ TVE+FRKF+++VPEF   C+N LLRTLCQEK+M DARNVYH LKH
Sbjct: 172 IAKVCSVKQTVESFRKFKKLVPEFDTACFNALLRTLCQEKSMRDARNVYHSLKH 225