BLASTX nr result

ID: Bupleurum21_contig00028632 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00028632
         (445 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN66607.1| hypothetical protein VITISV_017554 [Vitis vinifera]   125   5e-27
emb|CAN76793.1| hypothetical protein VITISV_026680 [Vitis vinifera]   124   6e-27
emb|CAN83300.1| hypothetical protein VITISV_044100 [Vitis vinifera]   124   1e-26
gb|AAX95226.1| retrotransposon protein, putative, unclassified [...   121   7e-26
gb|ABA91843.2| retrotransposon protein, putative, unclassified [...   121   7e-26

>emb|CAN66607.1| hypothetical protein VITISV_017554 [Vitis vinifera]
          Length = 2822

 Score =  125 bits (313), Expect = 5e-27
 Identities = 67/152 (44%), Positives = 96/152 (63%), Gaps = 6/152 (3%)
 Frame = +1

Query: 1    FRQYLLGRKFIIYTDQQSLKHLLSQTIQTPEQHKWLTKLMRYDYIVIYKPGKENLVADAL 180
            +R YLLG  F I TDQQSLK+LL Q + TP Q +W+TKL+ Y+++V YK GKEN VADAL
Sbjct: 865  WRSYLLGHNFKIQTDQQSLKYLLEQKMGTPLQQQWITKLLGYEFVVEYKQGKENKVADAL 924

Query: 181  SR----VQQPSFQAISAPTLPWLNVLRDYYQNQLEGREFLQKAQDNTL--KGYTIHDGLV 342
            SR     ++    AI+AP   WL  LR  Y    + ++ ++  +  +L  + Y   DGL+
Sbjct: 925  SRKMEDQKEGKLYAITAPANTWLEQLRTSYAIDPKLQQIIKNLEQGSLASQNYKQRDGLL 984

Query: 343  YFQGRIEIPENSALRSLIVDEYHATPLGGHSG 438
            +++GR+ IP +  LR  I+   H++P GGHSG
Sbjct: 985  FYKGRLYIPASKELREQILYLLHSSPQGGHSG 1016


>emb|CAN76793.1| hypothetical protein VITISV_026680 [Vitis vinifera]
          Length = 1469

 Score =  124 bits (312), Expect = 6e-27
 Identities = 67/152 (44%), Positives = 95/152 (62%), Gaps = 6/152 (3%)
 Frame = +1

Query: 1    FRQYLLGRKFIIYTDQQSLKHLLSQTIQTPEQHKWLTKLMRYDYIVIYKPGKENLVADAL 180
            +R YLLG  F I TDQ SLK+LL Q + TP Q KW+TKL+ Y+++V YK GKEN VADAL
Sbjct: 912  WRSYLLGHNFKIQTDQXSLKYLLEQKMGTPLQQKWITKLLGYEFVVEYKQGKENKVADAL 971

Query: 181  SR----VQQPSFQAISAPTLPWLNVLRDYYQNQLEGREFLQKAQDNTL--KGYTIHDGLV 342
            SR     ++    AI+AP   WL  LR  Y    + ++ ++  +  +L  + Y   DGL+
Sbjct: 972  SRKMEDQKEGKLYAITAPANTWLEQLRTXYAIDPKLQQIIKNLEQGSLASQNYKQRDGLL 1031

Query: 343  YFQGRIEIPENSALRSLIVDEYHATPLGGHSG 438
            +++GR+ IP +  LR  I+   H++P GGHSG
Sbjct: 1032 FYKGRLYIPASKELREQILYLLHSSPQGGHSG 1063


>emb|CAN83300.1| hypothetical protein VITISV_044100 [Vitis vinifera]
          Length = 1366

 Score =  124 bits (310), Expect = 1e-26
 Identities = 66/152 (43%), Positives = 96/152 (63%), Gaps = 6/152 (3%)
 Frame = +1

Query: 1    FRQYLLGRKFIIYTDQQSLKHLLSQTIQTPEQHKWLTKLMRYDYIVIYKPGKENLVADAL 180
            +R YLLG  F I TDQQSLK+LL + + TP Q +W+TKL+ Y+++V YK GKEN VADAL
Sbjct: 879  WRSYLLGHNFKIQTDQQSLKYLLEEKMGTPLQQQWITKLLGYEFVVEYKQGKENKVADAL 938

Query: 181  SR----VQQPSFQAISAPTLPWLNVLRDYYQNQLEGREFLQKAQDNTL--KGYTIHDGLV 342
            SR     ++    AI+AP   WL  LR  Y    + ++ ++  +  +L  + Y   DGL+
Sbjct: 939  SRKMEDQKEGKLYAITAPANTWLEQLRTSYAIDPKLQQIIKNLEQGSLASQNYKQRDGLL 998

Query: 343  YFQGRIEIPENSALRSLIVDEYHATPLGGHSG 438
            +++GR+ IP +  LR  I+   H++P GGHSG
Sbjct: 999  FYKGRLYIPASKELREQILYLLHSSPQGGHSG 1030


>gb|AAX95226.1| retrotransposon protein, putative, unclassified [Oryza sativa
            Japonica Group]
          Length = 1513

 Score =  121 bits (303), Expect = 7e-26
 Identities = 62/155 (40%), Positives = 97/155 (62%), Gaps = 7/155 (4%)
 Frame = +1

Query: 1    FRQYLLGRKFIIYTDQQSLKHLLSQTIQTPEQHKWLTKLMRYDYIVIYKPGKENLVADAL 180
            +R Y LG K +I TDQQSLKH+++Q +    QHK L KLM YDYI+ YK GK+N+VADAL
Sbjct: 990  WRHYFLGSKLVIKTDQQSLKHMMNQRLVEGIQHKLLLKLMEYDYIIEYKAGKDNVVADAL 1049

Query: 181  SRVQQPSFQ-----AISAPTLPWLNVLRDYYQNQLEGREFLQKAQDNT--LKGYTIHDGL 339
            SR+ Q   Q     AI+     W+  +++ Y+  ++  + L     N+   + Y+  +G+
Sbjct: 1050 SRLPQDQLQTEICNAITVVIPKWIIDVQNSYEGDVQAHKILSMIGTNSDPDQHYSFENGI 1109

Query: 340  VYFQGRIEIPENSALRSLIVDEYHATPLGGHSGAR 444
            + F+GRI + E +++R+ ++ +YH +  GGHSG R
Sbjct: 1110 LRFKGRIYVGEETSIRTNLIRDYHCSAFGGHSGMR 1144


>gb|ABA91843.2| retrotransposon protein, putative, unclassified [Oryza sativa
            Japonica Group]
          Length = 1411

 Score =  121 bits (303), Expect = 7e-26
 Identities = 62/155 (40%), Positives = 97/155 (62%), Gaps = 7/155 (4%)
 Frame = +1

Query: 1    FRQYLLGRKFIIYTDQQSLKHLLSQTIQTPEQHKWLTKLMRYDYIVIYKPGKENLVADAL 180
            +R Y LG K +I TDQQSLKH+++Q +    QHK L KLM YDYI+ YK GK+N+VADAL
Sbjct: 888  WRHYFLGSKLVIKTDQQSLKHMMNQRLVEGIQHKLLLKLMEYDYIIEYKAGKDNVVADAL 947

Query: 181  SRVQQPSFQ-----AISAPTLPWLNVLRDYYQNQLEGREFLQKAQDNT--LKGYTIHDGL 339
            SR+ Q   Q     AI+     W+  +++ Y+  ++  + L     N+   + Y+  +G+
Sbjct: 948  SRLPQDQLQTEICNAITVVIPKWIIDVQNSYEGDVQAHKILSMIGTNSDPDQHYSFENGI 1007

Query: 340  VYFQGRIEIPENSALRSLIVDEYHATPLGGHSGAR 444
            + F+GRI + E +++R+ ++ +YH +  GGHSG R
Sbjct: 1008 LRFKGRIYVGEETSIRTNLIRDYHCSAFGGHSGMR 1042


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