BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00028627
         (296 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AEI98616.1| hypothetical protein 111O18.3 [Coffea canephora]        85   5e-15
emb|CBI17549.3| unnamed protein product [Vitis vinifera]               81   1e-13
ref|XP_002310208.1| predicted protein [Populus trichocarpa] gi|2...    79   4e-13
ref|XP_002268044.2| PREDICTED: DNA-directed RNA polymerase III s...    78   7e-13
ref|XP_002525112.1| DNA-directed RNA polymerase, putative [Ricin...    75   6e-12

>gb|AEI98616.1| hypothetical protein 111O18.3 [Coffea canephora]
          Length = 643

 Score = 85.1 bits (209), Expect = 5e-15
 Identities = 46/96 (47%), Positives = 64/96 (66%), Gaps = 4/96 (4%)
 Frame = -1

Query: 278 PVIKL-EDSGDDWIRLSYNGARTDAAREYLHKMMAAEDSQIQFSMSSGDYVESFCPRLPN 102
           PVI+  +D+ +DWI L+Y+GAR+D +  Y+ KM+  + S IQFSM+  DYV + CP   N
Sbjct: 263 PVIEQNKDTREDWIPLNYHGARSDISMSYVRKMVEHDSSHIQFSMNH-DYVNTLCPGTSN 321

Query: 101 R---QAGPSRSELLKLPIEERFRIWICETGPMHRFN 3
                 GPSR  LL LP+EERFR W+ +  P+HRF+
Sbjct: 322 ENNGSNGPSR-VLLSLPLEERFRTWLLQGPPIHRFD 356


>emb|CBI17549.3| unnamed protein product [Vitis vinifera]
          Length = 688

 Score = 80.9 bits (198), Expect = 1e-13
 Identities = 39/90 (43%), Positives = 56/90 (62%), Gaps = 4/90 (4%)
 Frame = -1

Query: 260 DSGDDWIRLSYNGARTDAAREYLHKMMAAEDSQIQFSMSSGDYVESFCP----RLPNRQA 93
           D+ + W+ L Y+ + +D +  YL KM+A ++S IQF MS  +YV S CP       NR  
Sbjct: 270 DAAESWVPLKYHSSESDFSARYLQKMVAEDNSPIQFLMSPYEYVNSLCPPGVSNDDNRSK 329

Query: 92  GPSRSELLKLPIEERFRIWICETGPMHRFN 3
           G SR  LL +P+EERF+  +CE  P+HRF+
Sbjct: 330 GLSRRFLLSMPLEERFKTLLCEGPPVHRFS 359


>ref|XP_002310208.1| predicted protein [Populus trichocarpa] gi|222853111|gb|EEE90658.1|
           predicted protein [Populus trichocarpa]
          Length = 667

 Score = 79.0 bits (193), Expect = 4e-13
 Identities = 41/97 (42%), Positives = 57/97 (58%), Gaps = 3/97 (3%)
 Frame = -1

Query: 287 EEKPVIKLEDSGDDWIRLSYNGARTDAAREYLHKMMAAEDSQIQFSMSSGDYVESFCPRL 108
           E+KP     D  + WI L Y+G+++D +  YL  M+A E S I+F+M+  DY+ S CP +
Sbjct: 266 EQKP-----DVEESWIPLKYHGSKSDLSSRYLQNMVAPESSTIEFAMNPYDYMSSLCPGI 320

Query: 107 PNRQA---GPSRSELLKLPIEERFRIWICETGPMHRF 6
            N      GPSR  LL LP+EER +    E  P+HRF
Sbjct: 321 SNNNIKLNGPSRRVLLSLPLEERIKRLFLEGPPIHRF 357


>ref|XP_002268044.2| PREDICTED: DNA-directed RNA polymerase III subunit RPC5 [Vitis
           vinifera]
          Length = 672

 Score = 78.2 bits (191), Expect = 7e-13
 Identities = 43/112 (38%), Positives = 62/112 (55%), Gaps = 14/112 (12%)
 Frame = -1

Query: 296 VVVEEKPVIKLEDSGDD----------WIRLSYNGARTDAAREYLHKMMAAEDSQIQFSM 147
           V  +    +KLE S ++          W+ L Y+ + +D +  YL KM+A ++S IQF M
Sbjct: 232 VTGDTNSAVKLEVSNEEESVGSLKKQSWVPLKYHSSESDFSARYLQKMVAEDNSPIQFLM 291

Query: 146 SSGDYVESFCP----RLPNRQAGPSRSELLKLPIEERFRIWICETGPMHRFN 3
           S  +YV S CP       NR  G SR  LL +P+EERF+  +CE  P+HRF+
Sbjct: 292 SPYEYVNSLCPPGVSNDDNRSKGLSRRFLLSMPLEERFKTLLCEGPPVHRFS 343


>ref|XP_002525112.1| DNA-directed RNA polymerase, putative [Ricinus communis]
           gi|223535571|gb|EEF37239.1| DNA-directed RNA polymerase,
           putative [Ricinus communis]
          Length = 677

 Score = 75.1 bits (183), Expect = 6e-12
 Identities = 41/105 (39%), Positives = 59/105 (56%), Gaps = 13/105 (12%)
 Frame = -1

Query: 278 PVIKLEDSGDD----------WIRLSYNGARTDAAREYLHKMMAAEDSQIQFSMSSGDYV 129
           P +KLEDS +           WI L Y+G+++D +  YL KM+A E S ++F+M+  DY+
Sbjct: 249 PEVKLEDSNEGKPIGSSKKQCWISLKYHGSKSDFSSRYLEKMIAQESSPMEFTMTPYDYM 308

Query: 128 ESFCPRLPN---RQAGPSRSELLKLPIEERFRIWICETGPMHRFN 3
            S CP   N   +  GP R  LL LP+ ER +  I E  P+ RF+
Sbjct: 309 SSLCPVASNEKTKSKGPPRRFLLSLPLAERLKKLILEGPPVQRFS 353