BLASTX nr result

ID: Bupleurum21_contig00028625 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00028625
         (615 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002270249.1| PREDICTED: probable beta-D-xylosidase 2 [Vit...   302   4e-80
ref|XP_002320310.1| predicted protein [Populus trichocarpa] gi|2...   283   1e-74
ref|XP_002302758.1| predicted protein [Populus trichocarpa] gi|2...   280   1e-73
ref|XP_003519750.1| PREDICTED: probable beta-D-xylosidase 2-like...   277   1e-72
ref|XP_002515300.1| Beta-glucosidase, putative [Ricinus communis...   277   1e-72

>ref|XP_002270249.1| PREDICTED: probable beta-D-xylosidase 2 [Vitis vinifera]
            gi|297743965|emb|CBI36935.3| unnamed protein product
            [Vitis vinifera]
          Length = 768

 Score =  302 bits (773), Expect = 4e-80
 Identities = 147/187 (78%), Positives = 161/187 (86%)
 Frame = -2

Query: 614  SKVPMTRMNMRSSQSKNYPGRTYRFYNGPVVYPFGHGLSYSKFVHTIAQAPTLLSIPLHG 435
            SKVPMT M MR+  SK YPGRTYRFY GPVVY FGHGLSY+ FVHTIAQAPT ++IPLHG
Sbjct: 586  SKVPMTTMAMRAIPSKAYPGRTYRFYKGPVVYRFGHGLSYTNFVHTIAQAPTAVAIPLHG 645

Query: 434  RHHISSNTTFTRKSIRITHAKCNKLSISVHVHVKNVGSKDGSHTLLVFSRPPAGHWGPHK 255
             H    NTT + K+IR+THAKCN+LSI++H+ VKNVG+KDGSHTLLVFS+PPAGHW PHK
Sbjct: 646  HH----NTTVSGKAIRVTHAKCNRLSIALHLDVKNVGNKDGSHTLLVFSKPPAGHWAPHK 701

Query: 254  QLVAFAKVHVAARTQERVPIKIHVCKYLSVVDRSGIRRIPMGDHSLHIGDTKHSVSLQAE 75
            QLVAF KVHVAARTQ+RV I IHVCKYLSVVDRSGIRRIPMG H LHIGDTKH VSLQA 
Sbjct: 702  QLVAFEKVHVAARTQQRVQINIHVCKYLSVVDRSGIRRIPMGQHGLHIGDTKHLVSLQAA 761

Query: 74   KLGVIKS 54
             LGVIKS
Sbjct: 762  ALGVIKS 768


>ref|XP_002320310.1| predicted protein [Populus trichocarpa] gi|222861083|gb|EEE98625.1|
            predicted protein [Populus trichocarpa]
          Length = 635

 Score =  283 bits (725), Expect = 1e-74
 Identities = 134/187 (71%), Positives = 155/187 (82%)
 Frame = -2

Query: 614  SKVPMTRMNMRSSQSKNYPGRTYRFYNGPVVYPFGHGLSYSKFVHTIAQAPTLLSIPLHG 435
            + +PMT M MRSS+SK YPGRTYRFY G VVYPFGHG+SY+ FVHTIA APT++S+PL G
Sbjct: 449  TNLPMTNMAMRSSKSKGYPGRTYRFYKGKVVYPFGHGISYTNFVHTIASAPTMVSVPLDG 508

Query: 434  RHHISSNTTFTRKSIRITHAKCNKLSISVHVHVKNVGSKDGSHTLLVFSRPPAGHWGPHK 255
              H S N T + K+IR+THA+CN+LS+ + V VKN GS DG+HTLLV+SRPPA HW PHK
Sbjct: 509  HRHGSGNATISGKAIRVTHARCNRLSLGMQVDVKNTGSMDGTHTLLVYSRPPARHWAPHK 568

Query: 254  QLVAFAKVHVAARTQERVPIKIHVCKYLSVVDRSGIRRIPMGDHSLHIGDTKHSVSLQAE 75
            QLVAF KVHVAA TQ+RV I IHVCK LSVVD SGIRRIPMG+HSLHIGD KHSVSLQA 
Sbjct: 569  QLVAFEKVHVAAGTQQRVGINIHVCKSLSVVDGSGIRRIPMGEHSLHIGDVKHSVSLQAS 628

Query: 74   KLGVIKS 54
             LGV++S
Sbjct: 629  ILGVVES 635


>ref|XP_002302758.1| predicted protein [Populus trichocarpa] gi|222844484|gb|EEE82031.1|
           predicted protein [Populus trichocarpa]
          Length = 462

 Score =  280 bits (716), Expect = 1e-73
 Identities = 133/187 (71%), Positives = 152/187 (81%)
 Frame = -2

Query: 614 SKVPMTRMNMRSSQSKNYPGRTYRFYNGPVVYPFGHGLSYSKFVHTIAQAPTLLSIPLHG 435
           + +PMT M MR S+S  YPGRTYRFY G VVYPFGHG+SY+ FVHTIA APT++S+PL G
Sbjct: 276 TNLPMTNMAMRPSKSNGYPGRTYRFYKGKVVYPFGHGISYTNFVHTIASAPTMVSVPLDG 335

Query: 434 RHHISSNTTFTRKSIRITHAKCNKLSISVHVHVKNVGSKDGSHTLLVFSRPPAGHWGPHK 255
               S N T + K+IR+THA+CN+LS  V V VKN GS DG+HTLLV+S+PPAGHW P K
Sbjct: 336 HRQASRNATISGKAIRVTHARCNRLSFGVQVDVKNTGSMDGTHTLLVYSKPPAGHWAPLK 395

Query: 254 QLVAFAKVHVAARTQERVPIKIHVCKYLSVVDRSGIRRIPMGDHSLHIGDTKHSVSLQAE 75
           QLVAF KVHVAA TQ+RV I +HVCK+LSVVDRSGIRRIPMG HSLHIGD KHSVSLQA 
Sbjct: 396 QLVAFEKVHVAAGTQQRVGINVHVCKFLSVVDRSGIRRIPMGAHSLHIGDVKHSVSLQAS 455

Query: 74  KLGVIKS 54
            LGVIKS
Sbjct: 456 ILGVIKS 462


>ref|XP_003519750.1| PREDICTED: probable beta-D-xylosidase 2-like [Glycine max]
          Length = 772

 Score =  277 bits (708), Expect = 1e-72
 Identities = 133/187 (71%), Positives = 155/187 (82%), Gaps = 2/187 (1%)
 Frame = -2

Query: 608  VPMTRMNMRSSQSKNYPGRTYRFYNGPVVYPFGHGLSYSKFVHTIAQAPTLLSIPLHGRH 429
            +PMT M MR+S+SK YPGRTYRFYNGPVVYPFG+GLSY+ FVHT+  AP L+SIP+ G  
Sbjct: 587  LPMTNMAMRASRSKGYPGRTYRFYNGPVVYPFGYGLSYTHFVHTLTSAPKLVSIPVDGHR 646

Query: 428  HISSNTTFTRKSIRITHAKCNKLSISVHVHVKNVGSKDGSHTLLVFSRPPAG--HWGPHK 255
            H  +++    K+I++THA+C KLSI++HV VKNVGSKDG HTLLVFS PPAG  HW PHK
Sbjct: 647  H-GNSSNIANKAIKVTHARCGKLSINLHVDVKNVGSKDGIHTLLVFSAPPAGNGHWAPHK 705

Query: 254  QLVAFAKVHVAARTQERVPIKIHVCKYLSVVDRSGIRRIPMGDHSLHIGDTKHSVSLQAE 75
            QLVAF KVH+ A+ Q+RV +KIHVCK LSVVDRSG RRIPMG HSLHIGD KHSVSLQAE
Sbjct: 706  QLVAFEKVHIPAKAQQRVRVKIHVCKLLSVVDRSGTRRIPMGLHSLHIGDVKHSVSLQAE 765

Query: 74   KLGVIKS 54
             LG+IKS
Sbjct: 766  TLGIIKS 772


>ref|XP_002515300.1| Beta-glucosidase, putative [Ricinus communis]
            gi|223545780|gb|EEF47284.1| Beta-glucosidase, putative
            [Ricinus communis]
          Length = 768

 Score =  277 bits (708), Expect = 1e-72
 Identities = 132/187 (70%), Positives = 154/187 (82%)
 Frame = -2

Query: 614  SKVPMTRMNMRSSQSKNYPGRTYRFYNGPVVYPFGHGLSYSKFVHTIAQAPTLLSIPLHG 435
            + +PMT M MRSSQSK YPGRTYRFY G VVYPFGHG+SY+ FVH IA APT++S+PL G
Sbjct: 585  TNLPMTEMAMRSSQSKGYPGRTYRFYQGKVVYPFGHGMSYTHFVHNIASAPTMVSVPLDG 644

Query: 434  RHHISSNTTFTRKSIRITHAKCNKLSISVHVHVKNVGSKDGSHTLLVFSRPPAGHWGPHK 255
                  NT+ + K+IR+TH KCNKLS+ + V VKNVGSKDG+HTLLV+S PPAG W PHK
Sbjct: 645  HR---GNTSISGKAIRVTHTKCNKLSLGIQVDVKNVGSKDGTHTLLVYSAPPAGRWSPHK 701

Query: 254  QLVAFAKVHVAARTQERVPIKIHVCKYLSVVDRSGIRRIPMGDHSLHIGDTKHSVSLQAE 75
            QLVAF +VHV+A TQERV I IHVCK LSVVDRSGIRRIP+G+HS+HIG+ KHSVSLQA 
Sbjct: 702  QLVAFERVHVSAGTQERVGISIHVCKLLSVVDRSGIRRIPIGEHSIHIGNVKHSVSLQAT 761

Query: 74   KLGVIKS 54
             LGV+KS
Sbjct: 762  VLGVVKS 768


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