BLASTX nr result

ID: Bupleurum21_contig00028615 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00028615
         (447 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAA33941.1| beta-amylase [Glycine max]                             258   4e-67
gb|AAZ38831.1| beta-amylase [Glycine max]                             258   4e-67
pdb|1V3H|A Chain A, The Roles Of Glu186 And Glu380 In The Cataly...   258   4e-67
pdb|1V3I|A Chain A, The Roles Of Glu186 And Glu380 In The Cataly...   258   4e-67
pdb|1UKP|A Chain A, Crystal Structure Of Soybean Beta-Amylase Mu...   258   4e-67

>gb|AAA33941.1| beta-amylase [Glycine max]
          Length = 474

 Score =  258 bits (659), Expect = 4e-67
 Identities = 117/148 (79%), Positives = 128/148 (86%)
 Frame = -3

Query: 445 DFKEAATKAGHPEWELPSDAGTYNDTPEDTGFFRPNGTYLTEKGKFFLTWYSDKMIFHGD 266
           DFK A  +AGHPEWELP DAG YND PE TGFF+ NGTY+TEKGKFFLTWYS+K++ HGD
Sbjct: 217 DFKAAVARAGHPEWELPDDAGKYNDVPESTGFFKSNGTYVTEKGKFFLTWYSNKLLNHGD 276

Query: 265 QIQDEANKIFLGCKLKLASKVSGIHWWYKAANHAAELTTGYYNLNDRDGYRSIARMLSRH 86
           QI DEANK FLGCK+KLA KVSGIHWWYK  NHAAELT GYYNLNDRDGYR IARMLSRH
Sbjct: 277 QILDEANKAFLGCKVKLAIKVSGIHWWYKVENHAAELTAGYYNLNDRDGYRPIARMLSRH 336

Query: 85  SAILNFTCIEMRDSEQSAEAKCAPEELV 2
            AILNFTC+EMRDSEQ ++AK  P+ELV
Sbjct: 337 HAILNFTCLEMRDSEQPSDAKSGPQELV 364


>gb|AAZ38831.1| beta-amylase [Glycine max]
          Length = 496

 Score =  258 bits (659), Expect = 4e-67
 Identities = 117/148 (79%), Positives = 128/148 (86%)
 Frame = -3

Query: 445 DFKEAATKAGHPEWELPSDAGTYNDTPEDTGFFRPNGTYLTEKGKFFLTWYSDKMIFHGD 266
           DFK A  +AGHPEWELP DAG YND PE TGFF+ NGTY+TEKGKFFLTWYS+K++ HGD
Sbjct: 217 DFKAAVARAGHPEWELPDDAGKYNDVPESTGFFKSNGTYVTEKGKFFLTWYSNKLLNHGD 276

Query: 265 QIQDEANKIFLGCKLKLASKVSGIHWWYKAANHAAELTTGYYNLNDRDGYRSIARMLSRH 86
           QI DEANK FLGCK+KLA KVSGIHWWYK  NHAAELT GYYNLNDRDGYR IARMLSRH
Sbjct: 277 QILDEANKAFLGCKVKLAIKVSGIHWWYKVENHAAELTAGYYNLNDRDGYRPIARMLSRH 336

Query: 85  SAILNFTCIEMRDSEQSAEAKCAPEELV 2
            AILNFTC+EMRDSEQ ++AK  P+ELV
Sbjct: 337 HAILNFTCLEMRDSEQPSDAKSGPQELV 364


>pdb|1V3H|A Chain A, The Roles Of Glu186 And Glu380 In The Catalytic Reaction
           Of Soybean Beta-Amylase
          Length = 495

 Score =  258 bits (659), Expect = 4e-67
 Identities = 117/148 (79%), Positives = 128/148 (86%)
 Frame = -3

Query: 445 DFKEAATKAGHPEWELPSDAGTYNDTPEDTGFFRPNGTYLTEKGKFFLTWYSDKMIFHGD 266
           DFK A  +AGHPEWELP DAG YND PE TGFF+ NGTY+TEKGKFFLTWYS+K++ HGD
Sbjct: 216 DFKAAVARAGHPEWELPDDAGKYNDVPESTGFFKSNGTYVTEKGKFFLTWYSNKLLNHGD 275

Query: 265 QIQDEANKIFLGCKLKLASKVSGIHWWYKAANHAAELTTGYYNLNDRDGYRSIARMLSRH 86
           QI DEANK FLGCK+KLA KVSGIHWWYK  NHAAELT GYYNLNDRDGYR IARMLSRH
Sbjct: 276 QILDEANKAFLGCKVKLAIKVSGIHWWYKVENHAAELTAGYYNLNDRDGYRPIARMLSRH 335

Query: 85  SAILNFTCIEMRDSEQSAEAKCAPEELV 2
            AILNFTC+EMRDSEQ ++AK  P+ELV
Sbjct: 336 HAILNFTCLEMRDSEQPSDAKSGPQELV 363


>pdb|1V3I|A Chain A, The Roles Of Glu186 And Glu380 In The Catalytic Reaction
           Of Soybean Beta-Amylase
          Length = 495

 Score =  258 bits (659), Expect = 4e-67
 Identities = 117/148 (79%), Positives = 128/148 (86%)
 Frame = -3

Query: 445 DFKEAATKAGHPEWELPSDAGTYNDTPEDTGFFRPNGTYLTEKGKFFLTWYSDKMIFHGD 266
           DFK A  +AGHPEWELP DAG YND PE TGFF+ NGTY+TEKGKFFLTWYS+K++ HGD
Sbjct: 216 DFKAAVARAGHPEWELPDDAGKYNDVPESTGFFKSNGTYVTEKGKFFLTWYSNKLLNHGD 275

Query: 265 QIQDEANKIFLGCKLKLASKVSGIHWWYKAANHAAELTTGYYNLNDRDGYRSIARMLSRH 86
           QI DEANK FLGCK+KLA KVSGIHWWYK  NHAAELT GYYNLNDRDGYR IARMLSRH
Sbjct: 276 QILDEANKAFLGCKVKLAIKVSGIHWWYKVENHAAELTAGYYNLNDRDGYRPIARMLSRH 335

Query: 85  SAILNFTCIEMRDSEQSAEAKCAPEELV 2
            AILNFTC+EMRDSEQ ++AK  P+ELV
Sbjct: 336 HAILNFTCLEMRDSEQPSDAKSGPQELV 363


>pdb|1UKP|A Chain A, Crystal Structure Of Soybean Beta-Amylase Mutant
           Substituted At Surface Region gi|46015830|pdb|1UKP|B
           Chain B, Crystal Structure Of Soybean Beta-Amylase
           Mutant Substituted At Surface Region
           gi|46015831|pdb|1UKP|C Chain C, Crystal Structure Of
           Soybean Beta-Amylase Mutant Substituted At Surface
           Region gi|46015832|pdb|1UKP|D Chain D, Crystal Structure
           Of Soybean Beta-Amylase Mutant Substituted At Surface
           Region
          Length = 495

 Score =  258 bits (659), Expect = 4e-67
 Identities = 117/148 (79%), Positives = 128/148 (86%)
 Frame = -3

Query: 445 DFKEAATKAGHPEWELPSDAGTYNDTPEDTGFFRPNGTYLTEKGKFFLTWYSDKMIFHGD 266
           DFK A  +AGHPEWELP DAG YND PE TGFF+ NGTY+TEKGKFFLTWYS+K++ HGD
Sbjct: 216 DFKAAVARAGHPEWELPDDAGKYNDVPESTGFFKSNGTYVTEKGKFFLTWYSNKLLNHGD 275

Query: 265 QIQDEANKIFLGCKLKLASKVSGIHWWYKAANHAAELTTGYYNLNDRDGYRSIARMLSRH 86
           QI DEANK FLGCK+KLA KVSGIHWWYK  NHAAELT GYYNLNDRDGYR IARMLSRH
Sbjct: 276 QILDEANKAFLGCKVKLAIKVSGIHWWYKVENHAAELTAGYYNLNDRDGYRPIARMLSRH 335

Query: 85  SAILNFTCIEMRDSEQSAEAKCAPEELV 2
            AILNFTC+EMRDSEQ ++AK  P+ELV
Sbjct: 336 HAILNFTCLEMRDSEQPSDAKSGPQELV 363


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