BLASTX nr result

ID: Bupleurum21_contig00028606 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00028606
         (499 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002510184.1| transcription factor, putative [Ricinus comm...   159   3e-37
gb|AFK34088.1| unknown [Lotus japonicus]                              157   8e-37
ref|XP_002284927.1| PREDICTED: WUSCHEL-related homeobox 4 [Vitis...   156   2e-36
gb|ACU15815.1| unknown [Glycine max]                                  155   3e-36
ref|XP_002327167.1| predicted protein [Populus trichocarpa] gi|2...   153   1e-35

>ref|XP_002510184.1| transcription factor, putative [Ricinus communis]
           gi|223550885|gb|EEF52371.1| transcription factor,
           putative [Ricinus communis]
          Length = 228

 Score =  159 bits (401), Expect = 3e-37
 Identities = 92/171 (53%), Positives = 115/171 (67%), Gaps = 27/171 (15%)
 Frame = -2

Query: 432 FDLKAFIKPSDKTNVVSASDDKIRGRFTQMEETWTHPGGTRWNPTQEQIGILDKLYKGGM 253
           FDLK+FI+P      + +S+DK +    Q+E   THPGGTRWNPTQEQIGIL+ LY+GGM
Sbjct: 56  FDLKSFIRPESGPRKLGSSEDK-KDSPPQVE---THPGGTRWNPTQEQIGILEMLYRGGM 111

Query: 252 RTPNAKQIEQITSQLAKYGKIEGKNVFYWFQNHKARQRQKLKR----LANSP----PTST 97
           RTPNA+QIEQIT+QL++YGKIEGKNVFYWFQNHKAR+RQK KR    L++SP    P +T
Sbjct: 112 RTPNAQQIEQITAQLSRYGKIEGKNVFYWFQNHKARERQKQKRNSLGLSHSPRTPGPITT 171

Query: 96  SSMEDR-------------------EFEDHRVKKKRSTRRETRGDETLELF 1
            S+E +                    FE   +++ RS+ RE  GD TLELF
Sbjct: 172 ISLETKGEVLEKDEDSPYKRKCRSWGFECLELEESRSSCRE-EGDRTLELF 221


>gb|AFK34088.1| unknown [Lotus japonicus]
          Length = 227

 Score =  157 bits (397), Expect = 8e-37
 Identities = 85/147 (57%), Positives = 104/147 (70%), Gaps = 7/147 (4%)
 Frame = -2

Query: 489 STLSTFCSLPNXXXXXTFRFDLKAFIKPSDKTNVVSASDDKIRGRFTQMEETWTHPGGTR 310
           +T +T  SLP         FD+K+FI+P      + +SDD  +   +   +  THPGGTR
Sbjct: 44  ATTTTTHSLP---------FDIKSFIRPESGPIKLLSSDDNKKDPPSPQSQVETHPGGTR 94

Query: 309 WNPTQEQIGILDKLYKGGMRTPNAKQIEQITSQLAKYGKIEGKNVFYWFQNHKARQRQKL 130
           WNPTQEQIGIL+ LY+GGMRTPNA+QIEQIT+QL+KYGKIEGKNVFYWFQNHKAR+RQK 
Sbjct: 95  WNPTQEQIGILEMLYRGGMRTPNAQQIEQITAQLSKYGKIEGKNVFYWFQNHKARERQKQ 154

Query: 129 KR----LANSPPTS---TSSMEDREFE 70
           KR    L++SP TS   T S+E R  E
Sbjct: 155 KRNSLGLSHSPRTSTIQTISLETRRGE 181


>ref|XP_002284927.1| PREDICTED: WUSCHEL-related homeobox 4 [Vitis vinifera]
           gi|147773642|emb|CAN76463.1| hypothetical protein
           VITISV_017034 [Vitis vinifera]
           gi|302142285|emb|CBI19488.3| unnamed protein product
           [Vitis vinifera]
          Length = 211

 Score =  156 bits (394), Expect = 2e-36
 Identities = 90/167 (53%), Positives = 103/167 (61%), Gaps = 23/167 (13%)
 Frame = -2

Query: 432 FDLKAFIKPSDKTNVVSASDDKIRGRFTQMEETWTHPGGTRWNPTQEQIGILDKLYKGGM 253
           FDLK+FI+P      +  SDDK         +  THPGGTRWNPTQEQIGIL+ LYK GM
Sbjct: 43  FDLKSFIRPESGPRKLGCSDDK-----RDSPQVETHPGGTRWNPTQEQIGILEMLYKSGM 97

Query: 252 RTPNAKQIEQITSQLAKYGKIEGKNVFYWFQNHKARQRQKLKR----LANSPPTSTSSME 85
           RTPNA+QIEQIT+QL KYGKIEGKNVFYWFQNHKAR+RQK KR    L + P T TS   
Sbjct: 98  RTPNAQQIEQITAQLGKYGKIEGKNVFYWFQNHKARERQKQKRNSLGLGHCPRTPTSITT 157

Query: 84  ---------DREFEDHRVKKKRSTRRET----------RGDETLELF 1
                     RE +    +K +S   ET           GD+TLELF
Sbjct: 158 ITLDTRVEVGREEDSPNKRKCKSWTFETVEENNRYYREEGDKTLELF 204


>gb|ACU15815.1| unknown [Glycine max]
          Length = 231

 Score =  155 bits (392), Expect = 3e-36
 Identities = 94/178 (52%), Positives = 110/178 (61%), Gaps = 34/178 (19%)
 Frame = -2

Query: 432 FDLKAFIKPSDKTNV--VSASDDKI--RGRFTQMEETWTH-PGGTRWNPTQEQIGILDKL 268
           FDLK+FIKP   +    + +SDD    RG  +   +  TH PGGTRWNPTQEQIGIL+ L
Sbjct: 47  FDLKSFIKPESASRKLGIGSSDDNTNKRGPSSPQGQAETHIPGGTRWNPTQEQIGILEML 106

Query: 267 YKGGMRTPNAKQIEQITSQLAKYGKIEGKNVFYWFQNHKARQRQKLKR------------ 124
           Y+GGMRTPNA+QIEQIT+QL+KYGKIEGKNVFYWFQNHKAR+RQK KR            
Sbjct: 107 YRGGMRTPNAQQIEQITAQLSKYGKIEGKNVFYWFQNHKARERQKQKRNNLGLAHSPRTT 166

Query: 123 LANSPP-----------TSTSSMEDREFEDHRVKKKRSTRRETRGDE------TLELF 1
           L  SPP           T    + +RE ED  +KK RS   E   D+      TLELF
Sbjct: 167 LTTSPPFSCCVITTMDTTKRGEVVEREEEDSPLKKCRSWAFEYLEDQREEEHRTLELF 224


>ref|XP_002327167.1| predicted protein [Populus trichocarpa] gi|222835482|gb|EEE73917.1|
           predicted protein [Populus trichocarpa]
          Length = 213

 Score =  153 bits (387), Expect = 1e-35
 Identities = 86/170 (50%), Positives = 109/170 (64%), Gaps = 26/170 (15%)
 Frame = -2

Query: 432 FDLKAFIKPSDKTNVVSASDDKIRGRFTQMEETWTHPGGTRWNPTQEQIGILDKLYKGGM 253
           FDLK+FI+P      +++SD+K         +  THPGGTRWNPTQEQIGIL+ LY+GGM
Sbjct: 44  FDLKSFIRPDSGPRKLASSDEK-----KDSPQGETHPGGTRWNPTQEQIGILEMLYRGGM 98

Query: 252 RTPNAKQIEQITSQLAKYGKIEGKNVFYWFQNHKARQRQKLKR----LANSP----PTST 97
           RTPN +QIE IT+QL++YGKIEGKNVFYWFQNHKAR+RQK KR    L++SP    P + 
Sbjct: 99  RTPNGQQIEDITAQLSRYGKIEGKNVFYWFQNHKARERQKQKRNSLGLSHSPRTPSPITI 158

Query: 96  SSMEDR------------------EFEDHRVKKKRSTRRETRGDETLELF 1
            S++ R                   FE   +++ RS + E  GD TLELF
Sbjct: 159 ISLDTRGEVEKDEDSPYKRKCRSWSFECFELEESRSCKEE--GDRTLELF 206


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