BLASTX nr result

ID: Bupleurum21_contig00028597 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00028597
         (621 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI26851.3| unnamed protein product [Vitis vinifera]              168   8e-40
ref|XP_002284829.1| PREDICTED: F-box protein SKIP28-like [Vitis ...   168   8e-40
gb|AFK36453.1| unknown [Lotus japonicus]                              164   1e-38
gb|AFK41645.1| unknown [Lotus japonicus]                              162   4e-38
ref|XP_002527773.1| conserved hypothetical protein [Ricinus comm...   160   2e-37

>emb|CBI26851.3| unnamed protein product [Vitis vinifera]
          Length = 237

 Score =  168 bits (425), Expect = 8e-40
 Identities = 81/140 (57%), Positives = 106/140 (75%)
 Frame = -3

Query: 442 HTGDKKMLQEVSNNLTQPAGPPHEAIFLVLSRLPLYELLSMSQVCKSLKDALDDDILLWL 263
           H+  +  +QEV        GPPHEA+ LVL+ LPL+ELL+MS+VC+SL+DA+D D+L WL
Sbjct: 30  HSQKELTIQEVER------GPPHEALLLVLAYLPLFELLNMSEVCRSLRDAVDKDVLQWL 83

Query: 262 NIYVDKPLNSRVSDHTLMEITSKANGRLSALALIDCRKITDDGLQAVIANNPLINKLYVP 83
           +I V+KPLN   SD  ++++TSKANGRL  LAL+ C KITDDGLQ VI  NPLIN+LY+P
Sbjct: 84  DIIVEKPLNMLFSDEIMIKLTSKANGRLRTLALMSCTKITDDGLQQVIEKNPLINRLYLP 143

Query: 82  GCTGLSAEGVVRVVEMLAEH 23
            CTGL+ EG++R V+ L EH
Sbjct: 144 ACTGLTPEGIMRAVKTLTEH 163


>ref|XP_002284829.1| PREDICTED: F-box protein SKIP28-like [Vitis vinifera]
          Length = 338

 Score =  168 bits (425), Expect = 8e-40
 Identities = 81/140 (57%), Positives = 106/140 (75%)
 Frame = -3

Query: 442 HTGDKKMLQEVSNNLTQPAGPPHEAIFLVLSRLPLYELLSMSQVCKSLKDALDDDILLWL 263
           H+  +  +QEV        GPPHEA+ LVL+ LPL+ELL+MS+VC+SL+DA+D D+L WL
Sbjct: 30  HSQKELTIQEVER------GPPHEALLLVLAYLPLFELLNMSEVCRSLRDAVDKDVLQWL 83

Query: 262 NIYVDKPLNSRVSDHTLMEITSKANGRLSALALIDCRKITDDGLQAVIANNPLINKLYVP 83
           +I V+KPLN   SD  ++++TSKANGRL  LAL+ C KITDDGLQ VI  NPLIN+LY+P
Sbjct: 84  DIIVEKPLNMLFSDEIMIKLTSKANGRLRTLALMSCTKITDDGLQQVIEKNPLINRLYLP 143

Query: 82  GCTGLSAEGVVRVVEMLAEH 23
            CTGL+ EG++R V+ L EH
Sbjct: 144 ACTGLTPEGIMRAVKTLTEH 163


>gb|AFK36453.1| unknown [Lotus japonicus]
          Length = 299

 Score =  164 bits (415), Expect = 1e-38
 Identities = 74/121 (61%), Positives = 102/121 (84%)
 Frame = -3

Query: 382 PPHEAIFLVLSRLPLYELLSMSQVCKSLKDALDDDILLWLNIYVDKPLNSRVSDHTLMEI 203
           PPHEA+FLVL+ LP+Y++L+MSQVCK+L+DA+++D+L WLN+ V++PL+SR+SD  L++I
Sbjct: 26  PPHEALFLVLTYLPVYQVLAMSQVCKALRDAVNNDVLPWLNVIVERPLSSRLSDEILVKI 85

Query: 202 TSKANGRLSALALIDCRKITDDGLQAVIANNPLINKLYVPGCTGLSAEGVVRVVEMLAEH 23
           TSKANGRL  LAL++C  ITD GLQ V+  NPLINKL++P CTG++AEGV R V+ L + 
Sbjct: 86  TSKANGRLKTLALMNCTHITDKGLQRVVEQNPLINKLHIPACTGITAEGVTRAVQTLCQR 145

Query: 22  S 20
           S
Sbjct: 146 S 146


>gb|AFK41645.1| unknown [Lotus japonicus]
          Length = 322

 Score =  162 bits (410), Expect = 4e-38
 Identities = 73/121 (60%), Positives = 101/121 (83%)
 Frame = -3

Query: 382 PPHEAIFLVLSRLPLYELLSMSQVCKSLKDALDDDILLWLNIYVDKPLNSRVSDHTLMEI 203
           PPHEA+FLVL+ LP+Y++L+MSQVCK+L+DA+++D+L WLN+ V++PL+SR+SD  L++I
Sbjct: 26  PPHEALFLVLTYLPVYQVLAMSQVCKALRDAVNNDVLPWLNVIVERPLSSRLSDEILVKI 85

Query: 202 TSKANGRLSALALIDCRKITDDGLQAVIANNPLINKLYVPGCTGLSAEGVVRVVEMLAEH 23
           TSKANGRL  LAL++C  ITD GLQ V+  NPL NKL++P CTG++AEGV R V+ L + 
Sbjct: 86  TSKANGRLKTLALMNCTHITDKGLQRVVEQNPLTNKLHIPACTGITAEGVTRAVQTLCQR 145

Query: 22  S 20
           S
Sbjct: 146 S 146


>ref|XP_002527773.1| conserved hypothetical protein [Ricinus communis]
           gi|223532808|gb|EEF34583.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 332

 Score =  160 bits (405), Expect = 2e-37
 Identities = 78/138 (56%), Positives = 106/138 (76%)
 Frame = -3

Query: 415 EVSNNLTQPAGPPHEAIFLVLSRLPLYELLSMSQVCKSLKDALDDDILLWLNIYVDKPLN 236
           E +N   +P GPPHEA+FLVL+ LP++ELL+MS+VC SL+DA++ D+L WL I VD+PL+
Sbjct: 34  ESANQQAEP-GPPHEALFLVLAYLPVFELLNMSEVCMSLRDAVNRDLLPWLTIIVDRPLS 92

Query: 235 SRVSDHTLMEITSKANGRLSALALIDCRKITDDGLQAVIANNPLINKLYVPGCTGLSAEG 56
           SR+SD  LM+I SKAN RL  L L +C KITDDGL+ VI  NP INKL++P CTGL+ EG
Sbjct: 93  SRLSDEILMKIASKANCRLRTLILRNCTKITDDGLEKVIEKNPYINKLHLPACTGLTPEG 152

Query: 55  VVRVVEMLAEHSRKPVSL 2
           +++ V++L++H     SL
Sbjct: 153 IIKAVKILSQHPNSLKSL 170


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