BLASTX nr result
ID: Bupleurum21_contig00028588
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Bupleurum21_contig00028588 (467 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002515280.1| conserved hypothetical protein [Ricinus comm... 64 1e-08 ref|XP_002301513.1| predicted protein [Populus trichocarpa] gi|2... 63 2e-08 >ref|XP_002515280.1| conserved hypothetical protein [Ricinus communis] gi|223545760|gb|EEF47264.1| conserved hypothetical protein [Ricinus communis] Length = 563 Score = 64.3 bits (155), Expect = 1e-08 Identities = 41/114 (35%), Positives = 58/114 (50%), Gaps = 8/114 (7%) Frame = -3 Query: 357 MATQQSFAFKPTRILVFSITISFSLTFLAFFYIWVIHSSPTLHRVTQFDLES-----GAE 193 M Q+SF+FKPTR LVFS T+S S+ FL FF W+ SSP++ + T F+L G + Sbjct: 1 MERQRSFSFKPTRFLVFSFTLSSSIIFLTFFTAWLFKSSPSILQETNFELNRTSLLLGLK 60 Query: 192 PLAA-DYGKNSSSNQDTSAVLIGTQF--PEFVDNTTRFEIFSRKGSEENDSGEK 40 P++ N S+N S+V + F PE I +G E E+ Sbjct: 61 PISVQSLTANFSANSFKSSVFTDSHFTVPENTSGFASISISRDRGESEPLKAER 114 >ref|XP_002301513.1| predicted protein [Populus trichocarpa] gi|222843239|gb|EEE80786.1| predicted protein [Populus trichocarpa] Length = 492 Score = 63.2 bits (152), Expect = 2e-08 Identities = 44/104 (42%), Positives = 61/104 (58%), Gaps = 9/104 (8%) Frame = -3 Query: 357 MATQQSFAFKPTRILVFSITISFSLTFLAFFYIWVIHSSPTLHRVTQFDLE-----SGAE 193 M Q+SF+FK TR LVFS TIS SL FL FF IWV S+P++ + T F+L + + Sbjct: 1 MDRQRSFSFKSTRSLVFSFTIS-SLFFLVFFTIWVSKSTPSILQETNFELNKTSLVASLK 59 Query: 192 PLA----ADYGKNSSSNQDTSAVLIGTQFPEFVDNTTRFEIFSR 73 PL+ +D NSSS+ S++ + T F E +N + F SR Sbjct: 60 PLSVQPFSDLTINSSSSDVKSSIFVDTHFRE-PENISGFASISR 102