BLASTX nr result

ID: Bupleurum21_contig00028588 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00028588
         (467 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002515280.1| conserved hypothetical protein [Ricinus comm...    64   1e-08
ref|XP_002301513.1| predicted protein [Populus trichocarpa] gi|2...    63   2e-08

>ref|XP_002515280.1| conserved hypothetical protein [Ricinus communis]
           gi|223545760|gb|EEF47264.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 563

 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 41/114 (35%), Positives = 58/114 (50%), Gaps = 8/114 (7%)
 Frame = -3

Query: 357 MATQQSFAFKPTRILVFSITISFSLTFLAFFYIWVIHSSPTLHRVTQFDLES-----GAE 193
           M  Q+SF+FKPTR LVFS T+S S+ FL FF  W+  SSP++ + T F+L       G +
Sbjct: 1   MERQRSFSFKPTRFLVFSFTLSSSIIFLTFFTAWLFKSSPSILQETNFELNRTSLLLGLK 60

Query: 192 PLAA-DYGKNSSSNQDTSAVLIGTQF--PEFVDNTTRFEIFSRKGSEENDSGEK 40
           P++      N S+N   S+V   + F  PE         I   +G  E    E+
Sbjct: 61  PISVQSLTANFSANSFKSSVFTDSHFTVPENTSGFASISISRDRGESEPLKAER 114


>ref|XP_002301513.1| predicted protein [Populus trichocarpa] gi|222843239|gb|EEE80786.1|
           predicted protein [Populus trichocarpa]
          Length = 492

 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 44/104 (42%), Positives = 61/104 (58%), Gaps = 9/104 (8%)
 Frame = -3

Query: 357 MATQQSFAFKPTRILVFSITISFSLTFLAFFYIWVIHSSPTLHRVTQFDLE-----SGAE 193
           M  Q+SF+FK TR LVFS TIS SL FL FF IWV  S+P++ + T F+L      +  +
Sbjct: 1   MDRQRSFSFKSTRSLVFSFTIS-SLFFLVFFTIWVSKSTPSILQETNFELNKTSLVASLK 59

Query: 192 PLA----ADYGKNSSSNQDTSAVLIGTQFPEFVDNTTRFEIFSR 73
           PL+    +D   NSSS+   S++ + T F E  +N + F   SR
Sbjct: 60  PLSVQPFSDLTINSSSSDVKSSIFVDTHFRE-PENISGFASISR 102


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