BLASTX nr result

ID: Bupleurum21_contig00028586 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00028586
         (372 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002317696.1| predicted protein [Populus trichocarpa] gi|2...   138   4e-31
ref|XP_002322110.1| predicted protein [Populus trichocarpa] gi|2...   138   5e-31
emb|CAN83822.1| hypothetical protein VITISV_030954 [Vitis vinifera]   137   9e-31
ref|XP_002274540.2| PREDICTED: probable LRR receptor-like serine...   136   2e-30
ref|XP_002512884.1| serine-threonine protein kinase, plant-type,...   134   6e-30

>ref|XP_002317696.1| predicted protein [Populus trichocarpa] gi|222858369|gb|EEE95916.1|
           predicted protein [Populus trichocarpa]
          Length = 1018

 Score =  138 bits (348), Expect = 4e-31
 Identities = 64/116 (55%), Positives = 82/116 (70%)
 Frame = +3

Query: 21  SNATDQQALLDVKSSITRDPLNMLSSWNHSVNVCLWQGVTCNRRHGRVMELNLSSQQLEG 200
           +N TD++ALL +K  +  DP   LSSWN S++ C W GV C  +H RV+ LNLSS QL G
Sbjct: 31  TNETDREALLAMKHLVLSDPFRALSSWNASLHFCTWHGVACGSKHQRVIALNLSSLQLAG 90

Query: 201 TLSPYIGNLSFLTELNLETNNFHGSIPSEIGKLFRLQYLLLGQN*FQGTFPANMTH 368
            LSP+IGNL+FL  ++L  NNFHG+IP E+G+LFRLQYL L  N FQ   P N++H
Sbjct: 91  FLSPHIGNLTFLRRIDLSKNNFHGTIPEEVGQLFRLQYLSLSNNSFQDELPGNLSH 146


>ref|XP_002322110.1| predicted protein [Populus trichocarpa] gi|222869106|gb|EEF06237.1|
           predicted protein [Populus trichocarpa]
          Length = 1023

 Score =  138 bits (347), Expect = 5e-31
 Identities = 65/114 (57%), Positives = 81/114 (71%)
 Frame = +3

Query: 21  SNATDQQALLDVKSSITRDPLNMLSSWNHSVNVCLWQGVTCNRRHGRVMELNLSSQQLEG 200
           +N TDQQALL +K  I+ DP N LSSWN+S+  C WQGVTC RRH RV  LNLSS +L G
Sbjct: 34  TNQTDQQALLAIKDFISEDPFNSLSSWNNSLQFCSWQGVTCGRRHRRVTSLNLSSLKLAG 93

Query: 201 TLSPYIGNLSFLTELNLETNNFHGSIPSEIGKLFRLQYLLLGQN*FQGTFPANM 362
           +LSP+ GNL+FL  ++L  N FH   P E+G+LFRL+YL L  N FQG  P+ +
Sbjct: 94  SLSPHFGNLTFLRVIDLSRNRFHHIFPPEVGQLFRLRYLSLANNSFQGELPSTL 147


>emb|CAN83822.1| hypothetical protein VITISV_030954 [Vitis vinifera]
          Length = 1904

 Score =  137 bits (345), Expect = 9e-31
 Identities = 68/114 (59%), Positives = 82/114 (71%)
 Frame = +3

Query: 24  NATDQQALLDVKSSITRDPLNMLSSWNHSVNVCLWQGVTCNRRHGRVMELNLSSQQLEGT 203
           N TD+ ALL +K+ IT+DPL + +SWN SV+ C W GVTC  RH RV  LNLSS  L G+
Sbjct: 68  NETDRLALLAIKAQITQDPLGITTSWNDSVHFCNWTGVTCGHRHQRVNTLNLSSLHLVGS 127

Query: 204 LSPYIGNLSFLTELNLETNNFHGSIPSEIGKLFRLQYLLLGQN*FQGTFPANMT 365
           LSP IGNL+FLT LNLE NNFHG IP E+G+L RL+ L L  N F G  PAN++
Sbjct: 128 LSPSIGNLTFLTGLNLELNNFHGQIPQELGRLSRLRALNLTNNSFSGEIPANLS 181



 Score = 95.5 bits (236), Expect = 4e-18
 Identities = 48/102 (47%), Positives = 64/102 (62%)
 Frame = +3

Query: 60   SSITRDPLNMLSSWNHSVNVCLWQGVTCNRRHGRVMELNLSSQQLEGTLSPYIGNLSFLT 239
            + IT  PL  +SSWN S++ C WQGV+C+ RH RV  LNL S  L G++ P IGNLSFL 
Sbjct: 1062 NGITDAPLRAMSSWNDSLHFCQWQGVSCSGRHQRVTVLNLHSLGLVGSIPPLIGNLSFLR 1121

Query: 240  ELNLETNNFHGSIPSEIGKLFRLQYLLLGQN*FQGTFPANMT 365
             +NL  N+F G +P  +    R+Q L L  N  +G  PAN++
Sbjct: 1122 TINLSNNSFQGEVPPVV----RMQILNLTNNWLEGQIPANLS 1159


>ref|XP_002274540.2| PREDICTED: probable LRR receptor-like serine/threonine-protein
           kinase At3g47570-like [Vitis vinifera]
          Length = 1040

 Score =  136 bits (342), Expect = 2e-30
 Identities = 67/114 (58%), Positives = 82/114 (71%)
 Frame = +3

Query: 24  NATDQQALLDVKSSITRDPLNMLSSWNHSVNVCLWQGVTCNRRHGRVMELNLSSQQLEGT 203
           N TD+ ALL +K+ IT+DPL + +SWN SV+ C W GVTC  RH RV  LNL+S  L G+
Sbjct: 37  NETDRLALLAIKAQITQDPLGITTSWNDSVHFCNWTGVTCGHRHQRVNTLNLNSLHLVGS 96

Query: 204 LSPYIGNLSFLTELNLETNNFHGSIPSEIGKLFRLQYLLLGQN*FQGTFPANMT 365
           LSP IGNL+FLT LNLE NNFHG IP E+G+L RL+ L L  N F G  PAN++
Sbjct: 97  LSPSIGNLTFLTGLNLELNNFHGQIPQELGRLSRLRALNLTNNSFSGEIPANLS 150


>ref|XP_002512884.1| serine-threonine protein kinase, plant-type, putative [Ricinus
           communis] gi|223547895|gb|EEF49387.1| serine-threonine
           protein kinase, plant-type, putative [Ricinus communis]
          Length = 600

 Score =  134 bits (338), Expect = 6e-30
 Identities = 63/116 (54%), Positives = 80/116 (68%)
 Frame = +3

Query: 18  SSNATDQQALLDVKSSITRDPLNMLSSWNHSVNVCLWQGVTCNRRHGRVMELNLSSQQLE 197
           S N TD+ ALL  K  I+ DP  + +SWN S++ C W G+TC RRH RV  L+L  Q L 
Sbjct: 32  SGNETDRLALLKFKQGISSDPHGIFNSWNDSLHFCKWYGITCGRRHQRVTSLDLKGQNLI 91

Query: 198 GTLSPYIGNLSFLTELNLETNNFHGSIPSEIGKLFRLQYLLLGQN*FQGTFPANMT 365
           G++SP+IGNLSFL  L+LE N+FH  IP E+GKLFRLQY LL  N  QG  P+N++
Sbjct: 92  GSISPHIGNLSFLRTLDLENNSFHDHIPQEVGKLFRLQYFLLNNNTLQGEVPSNLS 147


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