BLASTX nr result

ID: Bupleurum21_contig00028579 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00028579
         (460 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002297749.1| predicted protein [Populus trichocarpa] gi|2...   142   4e-32
ref|XP_002276918.2| PREDICTED: beta-galactosidase 7-like [Vitis ...   139   3e-31
ref|XP_002516237.1| beta-galactosidase, putative [Ricinus commun...   138   4e-31
ref|XP_002893682.1| Beta-galactosidase 15 precursor [Arabidopsis...   136   2e-30
emb|CAJ09953.1| beta-galactosidase [Mangifera indica]                 136   2e-30

>ref|XP_002297749.1| predicted protein [Populus trichocarpa] gi|222845007|gb|EEE82554.1|
           predicted protein [Populus trichocarpa]
          Length = 823

 Score =  142 bits (357), Expect = 4e-32
 Identities = 64/86 (74%), Positives = 78/86 (90%)
 Frame = +2

Query: 83  RFLQSSIWTIRDEGLYSILPIGPYVCAEWTYGGFPVWLHNMEGIELRTANDVYMNEMKNF 262
           RFL+    TI+DEGLY++L IGPYVCAEW YGGFPVWLHNM G+++RTANDV+MNEM+NF
Sbjct: 97  RFLK----TIQDEGLYAVLRIGPYVCAEWNYGGFPVWLHNMPGVQMRTANDVFMNEMRNF 152

Query: 263 TTLIVDMVKKERLFASQGGPIILSQV 340
           TTLIV+MVK+E LFASQGGP+IL+Q+
Sbjct: 153 TTLIVNMVKQENLFASQGGPVILAQI 178



 Score = 66.6 bits (161), Expect = 2e-09
 Identities = 29/40 (72%), Positives = 31/40 (77%)
 Frame = +3

Query: 339 FMDWGGSTPKRTTEDLAFSVARFFQKGGSVQNYDMYHGGT 458
           F  WGG  P RT EDLAFSVARF+Q GG+ QNY MYHGGT
Sbjct: 256 FKSWGGKDPHRTAEDLAFSVARFYQLGGTFQNYYMYHGGT 295


>ref|XP_002276918.2| PREDICTED: beta-galactosidase 7-like [Vitis vinifera]
           gi|297738528|emb|CBI27773.3| unnamed protein product
           [Vitis vinifera]
          Length = 835

 Score =  139 bits (349), Expect = 3e-31
 Identities = 64/86 (74%), Positives = 76/86 (88%)
 Frame = +2

Query: 83  RFLQSSIWTIRDEGLYSILPIGPYVCAEWTYGGFPVWLHNMEGIELRTANDVYMNEMKNF 262
           RF+Q    TI+ EGLY++L IGPYVCAEWTYGGFP+WLHNM GIE RTAN V+MNEM+NF
Sbjct: 112 RFIQ----TIQAEGLYAVLRIGPYVCAEWTYGGFPMWLHNMPGIEFRTANKVFMNEMQNF 167

Query: 263 TTLIVDMVKKERLFASQGGPIILSQV 340
           TTLIVDM K+E+LFASQGGPII++Q+
Sbjct: 168 TTLIVDMAKQEKLFASQGGPIIIAQI 193



 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 28/40 (70%), Positives = 32/40 (80%)
 Frame = +3

Query: 339 FMDWGGSTPKRTTEDLAFSVARFFQKGGSVQNYDMYHGGT 458
           F +WGG  P RT EDL++SVARFFQ GG+ QNY MYHGGT
Sbjct: 271 FKNWGGKDPHRTAEDLSYSVARFFQTGGTFQNYYMYHGGT 310


>ref|XP_002516237.1| beta-galactosidase, putative [Ricinus communis]
           gi|223544723|gb|EEF46239.1| beta-galactosidase, putative
           [Ricinus communis]
          Length = 825

 Score =  138 bits (348), Expect = 4e-31
 Identities = 61/80 (76%), Positives = 74/80 (92%)
 Frame = +2

Query: 101 IWTIRDEGLYSILPIGPYVCAEWTYGGFPVWLHNMEGIELRTANDVYMNEMKNFTTLIVD 280
           I  ++DEGLY++L IGPYVCAEW YGGFPVWLHNM GIELRTAN ++MNEM+NFT+LIVD
Sbjct: 99  IKAVQDEGLYAVLRIGPYVCAEWNYGGFPVWLHNMPGIELRTANSIFMNEMQNFTSLIVD 158

Query: 281 MVKKERLFASQGGPIILSQV 340
           M+K+E+LFASQGGPII++QV
Sbjct: 159 MMKQEQLFASQGGPIIIAQV 178



 Score = 65.9 bits (159), Expect = 3e-09
 Identities = 28/40 (70%), Positives = 31/40 (77%)
 Frame = +3

Query: 339 FMDWGGSTPKRTTEDLAFSVARFFQKGGSVQNYDMYHGGT 458
           F  WGG  P RT ED+AF+VARFFQ GG+ QNY MYHGGT
Sbjct: 256 FKSWGGKDPHRTAEDVAFAVARFFQTGGTFQNYYMYHGGT 295


>ref|XP_002893682.1| Beta-galactosidase 15 precursor [Arabidopsis lyrata subsp. lyrata]
           gi|297339524|gb|EFH69941.1| Beta-galactosidase 15
           precursor [Arabidopsis lyrata subsp. lyrata]
          Length = 780

 Score =  136 bits (343), Expect = 2e-30
 Identities = 62/86 (72%), Positives = 74/86 (86%)
 Frame = +2

Query: 83  RFLQSSIWTIRDEGLYSILPIGPYVCAEWTYGGFPVWLHNMEGIELRTANDVYMNEMKNF 262
           RFL+    TI+DEG+Y +L IGPYVCAEW YGGFPVWLHNM G+E RT N  +MNEM+NF
Sbjct: 95  RFLK----TIQDEGMYGVLRIGPYVCAEWNYGGFPVWLHNMPGMEFRTTNTAFMNEMQNF 150

Query: 263 TTLIVDMVKKERLFASQGGPIILSQV 340
           TT+IV+MVKKE+LFASQGGPIIL+Q+
Sbjct: 151 TTMIVEMVKKEKLFASQGGPIILAQI 176



 Score = 68.2 bits (165), Expect = 7e-10
 Identities = 28/40 (70%), Positives = 34/40 (85%)
 Frame = +3

Query: 339 FMDWGGSTPKRTTEDLAFSVARFFQKGGSVQNYDMYHGGT 458
           + +WGG  P RTTED+AF+VARFFQ+GG+ QNY MYHGGT
Sbjct: 254 YKNWGGKDPHRTTEDVAFAVARFFQRGGTFQNYYMYHGGT 293


>emb|CAJ09953.1| beta-galactosidase [Mangifera indica]
          Length = 827

 Score =  136 bits (343), Expect = 2e-30
 Identities = 62/81 (76%), Positives = 74/81 (91%), Gaps = 1/81 (1%)
 Frame = +2

Query: 101 IWTIRDEGLYSILPIGPYVCAEWTYGGFPVWLHNMEGI-ELRTANDVYMNEMKNFTTLIV 277
           I TI+DEGLY++L IGPYVCAEW YGGFPVWLHNM G+ E RT N+V+MNEM+NFTTLIV
Sbjct: 99  IKTIQDEGLYAVLRIGPYVCAEWNYGGFPVWLHNMPGVQEFRTVNEVFMNEMQNFTTLIV 158

Query: 278 DMVKKERLFASQGGPIILSQV 340
           DMVK+E+LFASQGGPII++Q+
Sbjct: 159 DMVKQEKLFASQGGPIIIAQI 179



 Score = 68.2 bits (165), Expect = 7e-10
 Identities = 30/40 (75%), Positives = 31/40 (77%)
 Frame = +3

Query: 339 FMDWGGSTPKRTTEDLAFSVARFFQKGGSVQNYDMYHGGT 458
           F  WGG  P RT EDLAFSVARFFQ GG+ QNY MYHGGT
Sbjct: 257 FKSWGGKDPHRTAEDLAFSVARFFQTGGTFQNYYMYHGGT 296


Top