BLASTX nr result

ID: Bupleurum21_contig00028573 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00028573
         (277 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004156492.1| PREDICTED: TMV resistance protein N-like [Cu...    79   5e-13
gb|ACN87574.1| NBS-containing resistance-like protein [Corylus a...    77   1e-12
gb|ABH06502.1| NBS-containing resistance-like protein [Prunus se...    77   1e-12
gb|ABH06399.1| NBS-containing resistance-like protein [Prunus av...    77   1e-12
ref|XP_002329457.1| tir-nbs-lrr resistance protein [Populus tric...    77   1e-12

>ref|XP_004156492.1| PREDICTED: TMV resistance protein N-like [Cucumis sativus]
          Length = 466

 Score = 78.6 bits (192), Expect = 5e-13
 Identities = 43/92 (46%), Positives = 59/92 (64%), Gaps = 3/92 (3%)
 Frame = +1

Query: 10  LLESFNDNCFLANVREISGTLNGLESLQQQLINDILKSKTKIEVHNVDEGTELIRARLCS 189
           +++ F   CFLANVRE S    GL  LQ +L+ +IL   + I+V N+D G  +IR RLCS
Sbjct: 182 IVDDFEGCCFLANVREASNQYRGLVGLQNELLREILVDDS-IKVSNLDIGISIIRDRLCS 240

Query: 190 TKILVVIDDVDDRTRFESLIGP---FAPGSLV 276
            KIL+++DDVD   + E+L G    F PGS+V
Sbjct: 241 KKILLILDDVDTSEQLEALAGGRDWFGPGSMV 272


>gb|ACN87574.1| NBS-containing resistance-like protein [Corylus avellana]
          Length = 212

 Score = 77.4 bits (189), Expect = 1e-12
 Identities = 37/82 (45%), Positives = 54/82 (65%)
 Frame = +1

Query: 7   LLLESFNDNCFLANVREISGTLNGLESLQQQLINDILKSKTKIEVHNVDEGTELIRARLC 186
           L+   F  NCFLANVREI+    GL  LQ+ L+++IL     ++V NVD G  +I+ RLC
Sbjct: 8   LIAYQFEGNCFLANVREIAKREYGLVQLQETLLSEILGDSRSLKVGNVDRGINVIKYRLC 67

Query: 187 STKILVVIDDVDDRTRFESLIG 252
           S ++L+++DDVD   + E+L G
Sbjct: 68  SKRVLLILDDVDQSIQLETLAG 89


>gb|ABH06502.1| NBS-containing resistance-like protein [Prunus serrulata]
          Length = 160

 Score = 77.4 bits (189), Expect = 1e-12
 Identities = 42/90 (46%), Positives = 58/90 (64%), Gaps = 5/90 (5%)
 Frame = +1

Query: 22  FNDNCFLANVREISG--TLNGLESLQQQLINDILKSKTKIEVHNVDEGTELIRARLCSTK 195
           F    FLANVRE+     + GL  L +QL+NDILKSK  I+V +V+ G ++IRARLC  +
Sbjct: 14  FEGRSFLANVREVIAHQPITGLVGLLEQLLNDILKSKDPIKVDSVEVGIDMIRARLCCKR 73

Query: 196 ILVVIDDVDDRTRFESLIGP---FAPGSLV 276
            LV+IDD DD  + +++ G    F PGS +
Sbjct: 74  ALVIIDDADDLQQLKAIAGARDWFGPGSRI 103


>gb|ABH06399.1| NBS-containing resistance-like protein [Prunus avium]
          Length = 172

 Score = 77.4 bits (189), Expect = 1e-12
 Identities = 42/90 (46%), Positives = 58/90 (64%), Gaps = 5/90 (5%)
 Frame = +1

Query: 22  FNDNCFLANVREISG--TLNGLESLQQQLINDILKSKTKIEVHNVDEGTELIRARLCSTK 195
           F    FLANVRE+     + GL  L +QL+NDILKSK  I+V +V+ G ++IRARLC  +
Sbjct: 14  FEGRSFLANVREVIAHQPITGLVGLLEQLLNDILKSKDPIKVDSVEVGIDMIRARLCCKR 73

Query: 196 ILVVIDDVDDRTRFESLIGP---FAPGSLV 276
            LV+IDD DD  + +++ G    F PGS +
Sbjct: 74  ALVIIDDADDLQQLKAIAGARDWFGPGSRI 103


>ref|XP_002329457.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
           gi|222870137|gb|EEF07268.1| tir-nbs-lrr resistance
           protein [Populus trichocarpa]
          Length = 373

 Score = 77.0 bits (188), Expect = 1e-12
 Identities = 43/92 (46%), Positives = 60/92 (65%), Gaps = 3/92 (3%)
 Frame = +1

Query: 10  LLESFNDNCFLANVREISGTLNGLESLQQQLINDILKSKTKIEVHNVDEGTELIRARLCS 189
           L  SF+  CFLANVREIS   NG   LQ+QL+ DILK+  KI++ NVD G  +I+ RL S
Sbjct: 245 LFHSFDGKCFLANVREISQQPNGHVKLQEQLLFDILKT-DKIKIGNVDRGMNMIKERLHS 303

Query: 190 TKILVVIDDVDDRTRFESLIGP---FAPGSLV 276
            K+L+++DDVD   + +++ G    F  GS +
Sbjct: 304 RKVLLILDDVDKLDQLQAIAGSRDWFGSGSRI 335


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