BLASTX nr result

ID: Bupleurum21_contig00028568 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00028568
         (401 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001234159.1| pollen-specific kinase partner protein [Sola...   172   2e-41
ref|XP_004166838.1| PREDICTED: LOW QUALITY PROTEIN: rho guanine ...   170   1e-40
ref|XP_004141842.1| PREDICTED: rho guanine nucleotide exchange f...   170   1e-40
ref|XP_004150349.1| PREDICTED: rho guanine nucleotide exchange f...   168   4e-40
ref|XP_002303291.1| predicted protein [Populus trichocarpa] gi|2...   168   4e-40

>ref|NP_001234159.1| pollen-specific kinase partner protein [Solanum lycopersicum]
           gi|57869094|gb|AAW57535.1| pollen-specific kinase
           partner protein [Solanum lycopersicum]
          Length = 502

 Score =  172 bits (437), Expect = 2e-41
 Identities = 83/115 (72%), Positives = 96/115 (83%)
 Frame = +1

Query: 55  NGKTSLGDTVYKNITFDHFDPDIFLTTMDLSSEHKILDLKNRIEASIVIWRRKMIAKDGK 234
           NG+ SLGD++Y++IT ++FDPD FL+TMDLSSEHKILDLKNRIEAS+VIWRRKM AKDGK
Sbjct: 258 NGRASLGDSIYRSITDEYFDPDYFLSTMDLSSEHKILDLKNRIEASVVIWRRKMTAKDGK 317

Query: 235 SSWGSSVSXXXXXXXXXXXXTILLILKHRFPGIPQSQLDISKIQYNRDVGHAVLE 399
           S+W S+VS            TILLILKHRFPGIPQS LDISKIQYNRD+G A+LE
Sbjct: 318 STWSSAVSMEKRELFEDRAETILLILKHRFPGIPQSSLDISKIQYNRDIGQAILE 372


>ref|XP_004166838.1| PREDICTED: LOW QUALITY PROTEIN: rho guanine nucleotide exchange
           factor 8-like [Cucumis sativus]
          Length = 553

 Score =  170 bits (431), Expect = 1e-40
 Identities = 84/115 (73%), Positives = 96/115 (83%)
 Frame = +1

Query: 55  NGKTSLGDTVYKNITFDHFDPDIFLTTMDLSSEHKILDLKNRIEASIVIWRRKMIAKDGK 234
           NG+ SLGD++YK+IT + FDPD FL++MDL+SEHKILDLK+RIEASIVIWRRKM  KDGK
Sbjct: 313 NGRASLGDSIYKSITVEFFDPDQFLSSMDLTSEHKILDLKDRIEASIVIWRRKMNQKDGK 372

Query: 235 SSWGSSVSXXXXXXXXXXXXTILLILKHRFPGIPQSQLDISKIQYNRDVGHAVLE 399
           S+WGS+VS            TILLILKHRFPGIPQS LDISKIQ+NRDVGHAVLE
Sbjct: 373 STWGSAVSMEKRELFEERAETILLILKHRFPGIPQSSLDISKIQFNRDVGHAVLE 427


>ref|XP_004141842.1| PREDICTED: rho guanine nucleotide exchange factor 8-like [Cucumis
           sativus]
          Length = 676

 Score =  170 bits (431), Expect = 1e-40
 Identities = 84/115 (73%), Positives = 96/115 (83%)
 Frame = +1

Query: 55  NGKTSLGDTVYKNITFDHFDPDIFLTTMDLSSEHKILDLKNRIEASIVIWRRKMIAKDGK 234
           NG+ SLGD++YK+IT + FDPD FL++MDL+SEHKILDLK+RIEASIVIWRRKM  KDGK
Sbjct: 436 NGRASLGDSIYKSITVEFFDPDQFLSSMDLTSEHKILDLKDRIEASIVIWRRKMNQKDGK 495

Query: 235 SSWGSSVSXXXXXXXXXXXXTILLILKHRFPGIPQSQLDISKIQYNRDVGHAVLE 399
           S+WGS+VS            TILLILKHRFPGIPQS LDISKIQ+NRDVGHAVLE
Sbjct: 496 STWGSAVSMEKRELFEERAETILLILKHRFPGIPQSSLDISKIQFNRDVGHAVLE 550


>ref|XP_004150349.1| PREDICTED: rho guanine nucleotide exchange factor 8-like [Cucumis
           sativus] gi|449516167|ref|XP_004165119.1| PREDICTED: rho
           guanine nucleotide exchange factor 8-like [Cucumis
           sativus]
          Length = 515

 Score =  168 bits (426), Expect = 4e-40
 Identities = 84/115 (73%), Positives = 94/115 (81%)
 Frame = +1

Query: 55  NGKTSLGDTVYKNITFDHFDPDIFLTTMDLSSEHKILDLKNRIEASIVIWRRKMIAKDGK 234
           NG+ SLGD++Y+NIT + FDPD FL+TMDLSSEHKILDLK+RIEASIVIW+RKM  KDGK
Sbjct: 266 NGRESLGDSIYRNITVEFFDPDQFLSTMDLSSEHKILDLKDRIEASIVIWKRKMNQKDGK 325

Query: 235 SSWGSSVSXXXXXXXXXXXXTILLILKHRFPGIPQSQLDISKIQYNRDVGHAVLE 399
           S+WGS+VS            TILLILKHRFPG PQS LDISKIQYNRDVG AVLE
Sbjct: 326 SAWGSAVSLEKRELFEERAETILLILKHRFPGTPQSALDISKIQYNRDVGQAVLE 380


>ref|XP_002303291.1| predicted protein [Populus trichocarpa] gi|222840723|gb|EEE78270.1|
           predicted protein [Populus trichocarpa]
          Length = 454

 Score =  168 bits (426), Expect = 4e-40
 Identities = 81/115 (70%), Positives = 94/115 (81%)
 Frame = +1

Query: 55  NGKTSLGDTVYKNITFDHFDPDIFLTTMDLSSEHKILDLKNRIEASIVIWRRKMIAKDGK 234
           NG+ SLGD+ Y++IT ++FDPD FL+TMDLSSEHKILDLKNRIEASIVIWRRKM  KDGK
Sbjct: 212 NGRASLGDSAYRSITLEYFDPDQFLSTMDLSSEHKILDLKNRIEASIVIWRRKMNQKDGK 271

Query: 235 SSWGSSVSXXXXXXXXXXXXTILLILKHRFPGIPQSQLDISKIQYNRDVGHAVLE 399
           S+WGS+VS            TILL+LK RFPG+PQS LD+SKIQYN DVGHA+LE
Sbjct: 272 SAWGSAVSLEKRELFEERAETILLLLKQRFPGLPQSSLDVSKIQYNEDVGHAILE 326


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