BLASTX nr result

ID: Bupleurum21_contig00028565 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00028565
         (390 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002267656.1| PREDICTED: condensin complex subunit 3 [Viti...   171   4e-41
emb|CBI18342.3| unnamed protein product [Vitis vinifera]              171   6e-41
emb|CAN73007.1| hypothetical protein VITISV_040123 [Vitis vinifera]   169   2e-40
ref|XP_003537443.1| PREDICTED: condensin complex subunit 3-like ...   167   1e-39
ref|XP_002534298.1| conserved hypothetical protein [Ricinus comm...   166   2e-39

>ref|XP_002267656.1| PREDICTED: condensin complex subunit 3 [Vitis vinifera]
            gi|297745068|emb|CBI38660.3| unnamed protein product
            [Vitis vinifera]
          Length = 1036

 Score =  171 bits (434), Expect = 4e-41
 Identities = 83/120 (69%), Positives = 100/120 (83%)
 Frame = +1

Query: 10   SKILLLSDNYPTIPASSHPLLLEKLMNLYFCSEIMELQRLKQCLSVFFEHYSAISVNHKK 189
            +KILLLS+NYP IPAS HPL L KL+ LYF +E  ELQRLKQCLSVFFEHY ++S +HKK
Sbjct: 687  AKILLLSENYPCIPASLHPLFLSKLIILYFSNETKELQRLKQCLSVFFEHYPSLSADHKK 746

Query: 190  CISRAFIPVLRSMWPGIDGNTVGSTIVVSNMRKRAVQASRFMLQMLQTPLYAKETGQVDE 369
            CIS++F+PV+RSMWPGI+    GS  +VSN+RK AVQASRFMLQM+Q PLYAKET + +E
Sbjct: 747  CISKSFMPVMRSMWPGINTRAGGSPFMVSNVRKLAVQASRFMLQMMQAPLYAKETEKQNE 806


>emb|CBI18342.3| unnamed protein product [Vitis vinifera]
          Length = 455

 Score =  171 bits (433), Expect = 6e-41
 Identities = 82/120 (68%), Positives = 101/120 (84%)
 Frame = +1

Query: 10  SKILLLSDNYPTIPASSHPLLLEKLMNLYFCSEIMELQRLKQCLSVFFEHYSAISVNHKK 189
           +KILLLS+NYP+IPAS HP  L KL+ LYF +E  ELQRLKQCLSVFFEHY ++S +HKK
Sbjct: 299 AKILLLSENYPSIPASLHPSFLSKLIILYFSNETKELQRLKQCLSVFFEHYRSLSADHKK 358

Query: 190 CISRAFIPVLRSMWPGIDGNTVGSTIVVSNMRKRAVQASRFMLQMLQTPLYAKETGQVDE 369
           CIS++F+PV+RSMWPGI+ +  GS  +VSNMRK AVQASRFM+QM+Q PLYAKET + +E
Sbjct: 359 CISKSFMPVMRSMWPGINTSAGGSPFLVSNMRKLAVQASRFMMQMMQAPLYAKETKKQNE 418


>emb|CAN73007.1| hypothetical protein VITISV_040123 [Vitis vinifera]
          Length = 862

 Score =  169 bits (429), Expect = 2e-40
 Identities = 82/120 (68%), Positives = 99/120 (82%)
 Frame = +1

Query: 10   SKILLLSDNYPTIPASSHPLLLEKLMNLYFCSEIMELQRLKQCLSVFFEHYSAISVNHKK 189
            +KILLLS+NYP IPAS HPL L KL+ LYF +E  ELQRLKQCLSVFFEHY ++S +HKK
Sbjct: 687  AKILLLSENYPCIPASLHPLFLSKLIILYFSNETKELQRLKQCLSVFFEHYPSLSADHKK 746

Query: 190  CISRAFIPVLRSMWPGIDGNTVGSTIVVSNMRKRAVQASRFMLQMLQTPLYAKETGQVDE 369
            C S++F+PV+RSMWPGI+    GS  +VSN+RK AVQASRFMLQM+Q PLYAKET + +E
Sbjct: 747  CXSKSFMPVMRSMWPGINTRAGGSPFMVSNVRKLAVQASRFMLQMMQAPLYAKETEKQNE 806


>ref|XP_003537443.1| PREDICTED: condensin complex subunit 3-like [Glycine max]
          Length = 1033

 Score =  167 bits (422), Expect = 1e-39
 Identities = 80/115 (69%), Positives = 94/115 (81%)
 Frame = +1

Query: 10   SKILLLSDNYPTIPASSHPLLLEKLMNLYFCSEIMELQRLKQCLSVFFEHYSAISVNHKK 189
            +KILLLSDNYP+IPAS HP++L KL+ LYF      L RLKQCLSVFFE Y  +S NHK+
Sbjct: 691  AKILLLSDNYPSIPASLHPVILSKLIYLYFTDVSEHLHRLKQCLSVFFELYPCLSANHKR 750

Query: 190  CISRAFIPVLRSMWPGIDGNTVGSTIVVSNMRKRAVQASRFMLQMLQTPLYAKET 354
            CI+++FIP +RSMWPGI GN+ GST +VS MRKRAVQASRFMLQM+Q PLY KET
Sbjct: 751  CITKSFIPAMRSMWPGIFGNSAGSTFMVSQMRKRAVQASRFMLQMVQIPLYVKET 805


>ref|XP_002534298.1| conserved hypothetical protein [Ricinus communis]
           gi|223525547|gb|EEF28084.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 427

 Score =  166 bits (420), Expect = 2e-39
 Identities = 83/125 (66%), Positives = 100/125 (80%), Gaps = 2/125 (1%)
 Frame = +1

Query: 10  SKILLLSDNYPTIPASSHPLLLEKLMNLYFCSEIMELQRLKQCLSVFFEHYSAISVNHK- 186
           +KILLLS+NY +IP   HPLLL KL+ LYF +E  +L+RLKQCLSVFFEHY  +S NHK 
Sbjct: 77  AKILLLSENYASIPTPLHPLLLVKLIILYFSNETKDLERLKQCLSVFFEHYPCLSANHKA 136

Query: 187 -KCISRAFIPVLRSMWPGIDGNTVGSTIVVSNMRKRAVQASRFMLQMLQTPLYAKETGQV 363
            KC+S+AF+PV+RSMWPGI GN  GS+ VVSNMRKRAVQASRFMLQM+Q PL+ ++T   
Sbjct: 137 SKCLSKAFVPVMRSMWPGIYGNAGGSSSVVSNMRKRAVQASRFMLQMMQAPLFVRKTEIE 196

Query: 364 DETCS 378
           DE  S
Sbjct: 197 DENGS 201


Top