BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00028560
         (518 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002276969.1| PREDICTED: transcription initiation factor T...   126   2e-27
ref|XP_002531209.1| transcription initiation factor tfiid, putat...   124   1e-26
emb|CBI26708.3| unnamed protein product [Vitis vinifera]              120   1e-25
ref|XP_002298845.1| predicted protein [Populus trichocarpa] gi|2...   107   1e-21
ref|XP_003518649.1| PREDICTED: transcription initiation factor T...   100   2e-19

>ref|XP_002276969.1| PREDICTED: transcription initiation factor TFIID subunit 6-like
           [Vitis vinifera]
          Length = 543

 Score =  126 bits (317), Expect = 2e-27
 Identities = 78/156 (50%), Positives = 105/156 (67%), Gaps = 5/156 (3%)
 Frame = +2

Query: 2   NKLKLAPMLLSPPTSSSWKVNAKIRTTITNKHKASTDDMMQQPPTKRAATEGSMGVMTAN 181
           ++LK  P LLSPPT +  K N KI  T  +K KASTD++MQQPP K+ AT+GSMGVM  N
Sbjct: 391 DRLKTFPNLLSPPTRAILKSNKKILPTKPSKRKASTDNLMQQPPLKKLATDGSMGVMPIN 450

Query: 182 SFPVNTQ-RTGVYSTS--LGGSDNGLSSISRQISAENVLVVDGRKDDSVK--KMSIASAR 346
           S  V+ Q  TG +STS  +G SD GLSS+S+Q+++EN  +  GR++   +  K S   A+
Sbjct: 451 SLAVDKQGLTGGFSTSTAVGSSDVGLSSMSQQLASEN--ISGGRREVGTRALKASAVLAQ 508

Query: 347 SWKEVTDAGQLLPLLTECFGESMHAFIPTPLSNIFL 454
           +WK+V +AGQL   L E FGESM  F P+P  ++FL
Sbjct: 509 AWKDV-NAGQLSASLFEYFGESMFCFTPSPELSLFL 543


>ref|XP_002531209.1| transcription initiation factor tfiid, putative [Ricinus communis]
           gi|223529211|gb|EEF31186.1| transcription initiation
           factor tfiid, putative [Ricinus communis]
          Length = 468

 Score =  124 bits (310), Expect = 1e-26
 Identities = 70/153 (45%), Positives = 95/153 (62%), Gaps = 2/153 (1%)
 Frame = +2

Query: 2   NKLKLAPMLLSPPTSSSWKVNAKIRTTITNKHKASTDDMMQQPPTKRAATEGSMGVMTAN 181
           +++K  P +L PPT + WK + ++ TT+ NK KAS+D+++QQPP K+ AT+G MGV+  N
Sbjct: 319 DRMKRLPGVLMPPTRAVWKSSGRLMTTVPNKRKASSDNLIQQPPLKKLATDGPMGVIPMN 378

Query: 182 SFPVNTQ-RTGVYSTSLGGSDNGLSSISRQISAENVLVVDGRK-DDSVKKMSIASARSWK 355
           S  V+ Q  TG Y T+ G S   +SS+SRQ+  EN   + GR     V K+    AR+WK
Sbjct: 379 SMHVDMQGATGGYHTASGASGMSISSMSRQLPNEN---MPGRDISGRVSKVLPVLARAWK 435

Query: 356 EVTDAGQLLPLLTECFGESMHAFIPTPLSNIFL 454
           E  DAG LL  L E FGESM  F P P  + FL
Sbjct: 436 EDMDAGHLLASLNELFGESMSCFAPKPELSFFL 468


>emb|CBI26708.3| unnamed protein product [Vitis vinifera]
          Length = 547

 Score =  120 bits (301), Expect = 1e-25
 Identities = 78/160 (48%), Positives = 104/160 (65%), Gaps = 9/160 (5%)
 Frame = +2

Query: 2   NKLKLAPMLLSPPTSSSWKVNAKIRTTITN----KHKASTDDMMQQPPTKRAATEGSMGV 169
           ++LK  P LLSPPT +  K N KI  T       K KASTD++MQQPP K+ AT+GSMGV
Sbjct: 391 DRLKTFPNLLSPPTRAILKSNKKILPTKPKINPGKRKASTDNLMQQPPLKKLATDGSMGV 450

Query: 170 MTANSFPVNTQ-RTGVYSTS--LGGSDNGLSSISRQISAENVLVVDGRKDDSVK--KMSI 334
           M  NS  V+ Q  TG +STS  +G SD GLSS+S+Q+++EN  +  GR++   +  K S 
Sbjct: 451 MPINSLAVDKQGLTGGFSTSTAVGSSDVGLSSMSQQLASEN--ISGGRREVGTRALKASA 508

Query: 335 ASARSWKEVTDAGQLLPLLTECFGESMHAFIPTPLSNIFL 454
             A++WK+V +AGQL   L E FGESM  F P+P  ++FL
Sbjct: 509 VLAQAWKDV-NAGQLSASLFEYFGESMFCFTPSPELSLFL 547


>ref|XP_002298845.1| predicted protein [Populus trichocarpa] gi|222846103|gb|EEE83650.1|
           predicted protein [Populus trichocarpa]
          Length = 529

 Score =  107 bits (267), Expect = 1e-21
 Identities = 64/153 (41%), Positives = 88/153 (57%), Gaps = 2/153 (1%)
 Frame = +2

Query: 2   NKLKLAPMLLSPPTSSSWKVNAKIRTTITNKHKASTDDMMQQPPTKRAATEGSMGVMTAN 181
           ++LK+ P L  PP+ + WK N ++ T + NK KASTD++MQQP  K+ AT+ ++G M  N
Sbjct: 395 DRLKMLPGLFIPPSRAIWKSNGRVMTAMPNKRKASTDNLMQQPLLKKIATDSAIGAMPMN 454

Query: 182 SFPVNTQRTGVYSTSLGGSDNGLSSISRQISAENVLVVDGRKDDSVK--KMSIASARSWK 355
           S PV  Q              G ++ISRQ+S ENV     R++ S +  K S   A++WK
Sbjct: 455 SMPVEMQ--------------GAATISRQLSNENV----PRREISGRGLKTSTVLAQAWK 496

Query: 356 EVTDAGQLLPLLTECFGESMHAFIPTPLSNIFL 454
           E  DAG LL  L E F ESM +F P P  + FL
Sbjct: 497 EDMDAGHLLASLFELFSESMFSFTPKPELSFFL 529


>ref|XP_003518649.1| PREDICTED: transcription initiation factor TFIID subunit 6-like
           [Glycine max]
          Length = 544

 Score = 99.8 bits (247), Expect = 2e-19
 Identities = 62/156 (39%), Positives = 83/156 (53%), Gaps = 5/156 (3%)
 Frame = +2

Query: 2   NKLKLAPMLLSPPTSSSWKVNAKIRTTITNKHKASTDDMMQQPPTKRAATEGSMGVMTAN 181
           ++LK+ P   SPP  + WK N+K+ T+ T K KAS D + QQPP K+AAT+G +GV   N
Sbjct: 391 DRLKIFPTFPSPPLHAVWKTNSKVLTSSTYKRKASPDQLEQQPPLKKAATDGEVGVDLMN 450

Query: 182 SFPVNTQRTGVYSTSLGGSDNGLSSISRQISAENVLVVDG-----RKDDSVKKMSIASAR 346
             PV+ Q       S   S  G SS S Q+  E  L  DG     R D    K S A  +
Sbjct: 451 FSPVHKQEEAGTQASSADSIIGTSSSSAQMKNETTL--DGELRGKRGDTQALKTSAALTQ 508

Query: 347 SWKEVTDAGQLLPLLTECFGESMHAFIPTPLSNIFL 454
            WK+  ++G+ L  L E FGE + +FI  P   +FL
Sbjct: 509 VWKDELNSGRTLVSLFELFGEGILSFIKAPEMYMFL 544