BLASTX nr result

ID: Bupleurum21_contig00028551 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00028551
         (479 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAB95727.1| transcription factor E2F [Daucus carota]              116   2e-24
ref|XP_003537096.1| PREDICTED: transcription factor E2FA-like [G...    97   2e-18
emb|CBI28269.3| unnamed protein product [Vitis vinifera]               94   9e-18
ref|XP_002272473.1| PREDICTED: transcription factor E2FB-like [V...    94   9e-18
emb|CBI30368.3| unnamed protein product [Vitis vinifera]               88   8e-16

>emb|CAB95727.1| transcription factor E2F [Daucus carota]
          Length = 431

 Score =  116 bits (290), Expect = 2e-24
 Identities = 63/87 (72%), Positives = 68/87 (78%)
 Frame = -2

Query: 478 SKDISSGIMKILPSEVDNDADYWLLTDPSISMTDMWMTDAGEPGVEWDGVRILNKEFGPA 299
           S+DIS GIMKILPSE+DNDADYWLLTDPSISMTDMW TDA   GVEWDG  +LN+EF   
Sbjct: 350 SEDISGGIMKILPSELDNDADYWLLTDPSISMTDMWKTDA---GVEWDGASLLNEEF-EL 405

Query: 298 NDGGPRPQTPTSCVADVSSTAANDTQK 218
               PRPQTP S VADV ST AN TQ+
Sbjct: 406 PCISPRPQTPPSGVADV-STVANGTQR 431


>ref|XP_003537096.1| PREDICTED: transcription factor E2FA-like [Glycine max]
          Length = 504

 Score = 96.7 bits (239), Expect = 2e-18
 Identities = 48/87 (55%), Positives = 65/87 (74%)
 Frame = -2

Query: 478 SKDISSGIMKILPSEVDNDADYWLLTDPSISMTDMWMTDAGEPGVEWDGVRILNKEFGPA 299
           S++ + G+MKI+PS+VDNDADYWLL+D  IS+TDMW TD+    V+W+GV +L+ +FG  
Sbjct: 425 SQEFAGGMMKIVPSDVDNDADYWLLSDADISITDMWRTDS---SVDWNGVDMLHPDFGVI 481

Query: 298 NDGGPRPQTPTSCVADVSSTAANDTQK 218
           +    RPQTP+S  A+V STAAN  QK
Sbjct: 482 S----RPQTPSSGFAEVPSTAANSIQK 504


>emb|CBI28269.3| unnamed protein product [Vitis vinifera]
          Length = 446

 Score = 94.4 bits (233), Expect = 9e-18
 Identities = 45/81 (55%), Positives = 58/81 (71%)
 Frame = -2

Query: 478 SKDISSGIMKILPSEVDNDADYWLLTDPSISMTDMWMTDAGEPGVEWDGVRILNKEFGPA 299
           S+D  SGIMKI+PS+VD+DADYWLL+D  +S+TDMW T   EPGVEW+ +  LN ++  A
Sbjct: 364 SQDFVSGIMKIVPSDVDSDADYWLLSDADVSITDMWRT---EPGVEWNELDALNDDYAMA 420

Query: 298 NDGGPRPQTPTSCVADVSSTA 236
           N   P+PQTP S  A+V   A
Sbjct: 421 NVSTPQPQTPPSSAAEVPPAA 441


>ref|XP_002272473.1| PREDICTED: transcription factor E2FB-like [Vitis vinifera]
          Length = 457

 Score = 94.4 bits (233), Expect = 9e-18
 Identities = 45/81 (55%), Positives = 58/81 (71%)
 Frame = -2

Query: 478 SKDISSGIMKILPSEVDNDADYWLLTDPSISMTDMWMTDAGEPGVEWDGVRILNKEFGPA 299
           S+D  SGIMKI+PS+VD+DADYWLL+D  +S+TDMW T   EPGVEW+ +  LN ++  A
Sbjct: 375 SQDFVSGIMKIVPSDVDSDADYWLLSDADVSITDMWRT---EPGVEWNELDALNDDYAMA 431

Query: 298 NDGGPRPQTPTSCVADVSSTA 236
           N   P+PQTP S  A+V   A
Sbjct: 432 NVSTPQPQTPPSSAAEVPPAA 452


>emb|CBI30368.3| unnamed protein product [Vitis vinifera]
          Length = 466

 Score = 87.8 bits (216), Expect = 8e-16
 Identities = 45/87 (51%), Positives = 60/87 (68%)
 Frame = -2

Query: 478 SKDISSGIMKILPSEVDNDADYWLLTDPSISMTDMWMTDAGEPGVEWDGVRILNKEFGPA 299
           S++   GIMKI+P +VD+DADYWL +D  +S+TDMW TD+    VEW+GV +LN EFG A
Sbjct: 384 SQEFIGGIMKIVP-DVDSDADYWLRSDAEVSITDMWKTDSY---VEWNGVDMLNAEFGMA 439

Query: 298 NDGGPRPQTPTSCVADVSSTAANDTQK 218
           +   P PQTP S + +  STA N T +
Sbjct: 440 DVSTPLPQTPPSGLTEGPSTAVNPTHR 466


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