BLASTX nr result

ID: Bupleurum21_contig00028546 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00028546
         (484 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002525990.1| protein with unknown function [Ricinus commu...    60   1e-07
ref|XP_002314789.1| predicted protein [Populus trichocarpa] gi|2...    56   3e-06

>ref|XP_002525990.1| protein with unknown function [Ricinus communis]
           gi|223534722|gb|EEF36414.1| protein with unknown
           function [Ricinus communis]
          Length = 557

 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 39/99 (39%), Positives = 50/99 (50%), Gaps = 5/99 (5%)
 Frame = +2

Query: 137 NPA--IDFILNEADDLLSSKQQVTTKNTTLFHVN---NNVGXXXXXXXXXXXXXXXXHQW 301
           NP+  +DF+ NE   L SSK       + L H +   N +                 H W
Sbjct: 41  NPSSNLDFVFNEVKALNSSKP-----TSQLAHPSSKANEISGYGNHTKRNDSVVQISHPW 95

Query: 302 PEWVELMEHLLKKGYFEDVGHPFRKKGQLGRKDANQIRT 418
           PEWV+LME LLK+GYFE   +PF   G+LG K+ N IRT
Sbjct: 96  PEWVDLMEFLLKRGYFEANENPF-LNGELGTKETNWIRT 133


>ref|XP_002314789.1| predicted protein [Populus trichocarpa] gi|222863829|gb|EEF00960.1|
           predicted protein [Populus trichocarpa]
          Length = 431

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 27/42 (64%), Positives = 32/42 (76%)
 Frame = +2

Query: 293 HQWPEWVELMEHLLKKGYFEDVGHPFRKKGQLGRKDANQIRT 418
           H WPEWV+LME LLK+GYFE  G+P   K +LG KDA+ IRT
Sbjct: 9   HPWPEWVDLMELLLKRGYFEAGGNPVGNK-ELGSKDASCIRT 49


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